Ricin

蓖麻毒素
  • 文章类型: Journal Article
    乳腺癌是全球癌症死亡的主要原因之一。此后,迫切需要设计具有更高特异性和有效性的新疗法。在这方面,使用免疫毒素的靶向免疫疗法在治疗癌症方面显示出巨大的前景。靶向乳腺癌细胞,作者使用了针对受体酪氨酸激酶的抗体片段,EphA2在许多癌症中过度表达。这个片段与植物毒素结合,蓖麻毒素A亚基,从N到C末端的两个不同方向(EphA2-C-Ricin和EphA2-N-Ricin)。然后,使用体外基于细胞的测定法对这两种免疫毒素进行了表征。处理了三种不同的细胞系,MDA-MB-231(乳腺癌)具有高水平的EphA2表达,MCF-7(乳腺癌)具有低水平的EphA2表达,和HEK293(人胚胎肾),其具有非常低的EphA2表达水平。此外,结合能力,细胞毒性,内化,并研究了这两种新开发的免疫毒素的凋亡能力。使用膜联蛋白V-碘化丙啶(PI)方法的流式细胞术显示仅在不同浓度的MDA-MB-231细胞中显著诱导凋亡。还发现构造I,EphA2-C-蓖麻毒素免疫毒素,可以绑定,内化,并比EphA2-N-蓖麻毒素免疫毒素更好地诱导细胞凋亡。此外,获得的数据表明,N或C末端取向构象具有重要意义。
    Breast cancer is one of the leading causes of cancer deaths worldwide. Thereafter, designing new treatments with higher specificity and efficacy is urgently required. In this regard, targeted immunotherapy using immunotoxins has shown great promise in treating cancer. To target a breast cancer cell, the authors used the antibody fragment against a receptor tyrosine kinase, EphA2, which is overexpressed in many cancers. This fragment was conjugated to a plant toxin, subunit A of ricin, in two different orientations from N to C-terminal (EphA2- C-Ricin and EphA2- N-Ricin). Then, these two immunotoxins were characterized using in vitro cell-based assays. Three different cell lines were treated, MDA-MB-231 (breast cancer) which has a high level of EphA2 expression, MCF-7 (breast cancer) which has a low level of EphA2 expression, and HEK293 (human embryonic kidney) which has a very low level of EphA2 expression. Moreover, binding ability, cytotoxicity, internalization, and apoptosis capacity of these two newly developed immunotoxins were investigated. The flow cytometry using Annexin V- Propidium iodide (PI) method indicated significant induction of apoptosis only in the MDA-MB-231 cells at different concentrations. It was also found that construct I, EphA2- C-Ricin immunotoxin, could bind, internalize, and induce apoptosis better than the EphA2- N-Ricin immunotoxin. In addition, the obtained data suggested that the N or C-terminal orientation conformation is of significant importance.
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  • 文章类型: Journal Article
    Abrin和蓖麻毒素,两种II型核糖体失活蛋白,受到《化学武器公约》和《生物和毒素武器公约》的国际限制。这些毒素的快速灵敏检测方法的开发对于首次应急响应至关重要。新兴的快速检测技术,如表面增强拉曼光谱(SERS)和侧流测定(LFA),由于它们的高灵敏度而引起了人们的注意,良好的选择性,操作方便,低成本,和可处置性。在这项工作中,我们产生了稳定的高亲和力纳米标签,通过有效的冷冻方法,用作SERS-LFA的捕获模块。然后,我们使用一对糖蛋白构建了三明治式的侧向流动测试条,asialofetuin和伴刀豆球蛋白A,作为核心亲和识别分子,能够对Abrin和蓖麻毒素进行痕量测量。Abrin和蓖麻毒素的检测限为0.1和0.3ng/mL,分别。该方法用于分析8个加标白色粉末样品,一份果汁样本,和三个实际的植物样本,与细胞毒性测定结果吻合良好。它在测试条之间显示出良好的批次间和批次内再现性,检测可以在15分钟内完成,表明这种SERS-LFA方法适用于现场快速检测abrin和蓖麻毒素。
    Abrin and ricin, both type II ribosome-inactivating proteins, are toxins of significant concern and are under international restriction by the Chemical Weapons Convention and the Biological and Toxin Weapons Convention. The development of a rapid and sensitive detection method for these toxins is of the utmost importance for the first emergency response. Emerging rapid detection techniques, such as surface-enhanced Raman spectroscopy (SERS) and lateral flow assay (LFA), have garnered attention due to their high sensitivity, good selectivity, ease of operation, low cost, and disposability. In this work, we generated stable and high-affinity nanotags, via an efficient freezing method, to serve as the capture module for SERS-LFA. We then constructed a sandwich-style lateral flow test strip using a pair of glycoproteins, asialofetuin and concanavalin A, as the core affinity recognition molecules, capable of trace measurement for both abrin and ricin. The limit of detection for abrin and ricin was 0.1 and 0.3 ng/mL, respectively. This method was applied to analyze eight spiked white powder samples, one juice sample, and three actual botanic samples, aligning well with cytotoxicity assay outcomes. It demonstrated good inter-batch and intra-batch reproducibility among the test strips, and the detection could be completed within 15 min, indicating the suitability of this SERS-LFA method for the on-site rapid detection of abrin and ricin toxins.
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  • 文章类型: Journal Article
    蓖麻毒素是一种有毒蛋白质,被认为是用于生物恐怖主义或犯罪的潜在化学武器。如果发生蓖麻毒素事件,快速分析方法对于在多种基质中确认蓖麻毒素至关重要,从环境到人类或食物样本。基于质谱的方法提供特异性毒素鉴定,但需要通过抗体预先富集以达到基质中的痕量水平检测。这里,我们描述了一种新的测定法,使用糖蛋白asialofetuin作为蓖麻毒素富集抗体的替代品,结合高分辨率质谱对特征肽的特异性检测。此外,对测定进行的优化将样品制备时间从5小时减少到80分钟。方法评估证实了在广泛的pH值范围内和富含蛋白质的样品中检测到痕量蓖麻毒素,说明具有挑战性的矩阵。这种新方法构成了一个相关的无抗体解决方案,用于在疑似毒素事件的情况下快速和特异地质谱检测蓖麻毒素,通过腺嘌呤释放测定法补充活性蓖麻毒素测定。
    Ricin is a toxic protein regarded as a potential chemical weapon for bioterrorism or criminal use. In the event of a ricin incident, rapid analytical methods are essential for ricin confirmation in a diversity of matrices, from environmental to human or food samples. Mass spectrometry-based methods provide specific toxin identification but require prior enrichment by antibodies to reach trace-level detection in matrices. Here, we describe a novel assay using the glycoprotein asialofetuin as an alternative to antibodies for ricin enrichment, combined with the specific detection of signature peptides by high-resolution mass spectrometry. Additionally, optimizations made to the assay reduced the sample preparation time from 5 h to 80 min only. Method evaluation confirmed the detection of ricin at trace levels over a wide range of pH and in protein-rich samples, illustrating challenging matrices. This new method constitutes a relevant antibody-free solution for the fast and specific mass spectrometry detection of ricin in the situation of a suspected toxin incident, complementary to active ricin determination by adenine release assays.
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  • 文章类型: Journal Article
    灵敏地检测危险和可疑的生物气溶胶对于保障公众健康至关重要。花粉对通过荧光光谱识别细菌物种的潜在影响不容忽视。在分析之前,光谱经过预处理步骤,包括规范化,多元散射校正,和Savitzky-Golay平滑。此外,使用差异转换光谱,标准正态变量,和快速傅里叶变换技术。采用随机森林算法对31种不同类型的样本进行分类和识别。快速傅里叶变换将样品激发-发射矩阵荧光光谱数据的分类精度提高了9.2%,结果准确率为89.24%。有害物质,包括金黄色葡萄球菌,蓖麻毒素,β-银环蛇毒素,和葡萄球菌肠毒素B,被明确区分。光谱数据变换和分类算法有效地消除了花粉对其他成分的干扰。此外,建立了基于光谱特征变换的分类识别模型,在检测有害物质和保护公众健康方面具有出色的应用潜力。本研究为有害生物气溶胶快速检测方法的应用奠定了坚实的基础。
    Sensitively detecting hazardous and suspected bioaerosols is crucial for safeguarding public health. The potential impact of pollen on identifying bacterial species through fluorescence spectra should not be overlooked. Before the analysis, the spectrum underwent preprocessing steps, including normalization, multivariate scattering correction, and Savitzky-Golay smoothing. Additionally, the spectrum was transformed using difference, standard normal variable, and fast Fourier transform techniques. A random forest algorithm was employed for the classification and identification of 31 different types of samples. The fast Fourier transform improved the classification accuracy of the sample excitation-emission matrix fluorescence spectrum data by 9.2%, resulting in an accuracy of 89.24%. The harmful substances, including Staphylococcus aureus, ricin, beta-bungarotoxin, and Staphylococcal enterotoxin B, were clearly distinguished. The spectral data transformation and classification algorithm effectively eliminated the interference of pollen on other components. Furthermore, a classification and recognition model based on spectral feature transformation was established, demonstrating excellent application potential in detecting hazardous substances and protecting public health. This study provided a solid foundation for the application of rapid detection methods for harmful bioaerosols.
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  • 文章类型: Journal Article
    Abrin和蓖麻毒素是植物产生的有毒蛋白质。两种蛋白质都由两个亚基组成,A链和B链。A链负责酶活性,导致毒性。B链与细胞表面上的糖蛋白结合以将A链引导至其靶标。这两种毒素都能脱嘌呤28SrRNA,使得仅根据酶活性来区分这些毒素是不可能的。我们使用单一方法和样品开发了蓖麻毒素和abrin的分析工作流程。我们开发了一种基于B链结合糖蛋白的能力的新型亲和富集技术,asialofetuin.在用涂有唾液酸酯的磁珠提取毒素后,添加RNA底物。然后,通过台式基质辅助激光解吸/电离飞行时间(MALDITOF)质谱仪检测脱嘌呤,以确定活性毒素的存在或不存在。接下来,对珠子进行胰蛋白酶消化。毒素指纹图谱在台式MALDI-TOFMS上完成。我们通过灵敏度和特异性研究验证了该测定,并将每种毒素的检测限确定为酶活性的纳克水平和毒素指纹的μg水平。我们检查了与毒素近邻的蛋白质的潜在交叉反应性,并检查了白色粉末存在下的潜在错误结果。
    Abrin and ricin are toxic proteins produced by plants. Both proteins are composed of two subunits, an A-chain and a B-chain. The A-chain is responsible for the enzymatic activity, which causes toxicity. The B-chain binds to glycoproteins on the cell surface to direct the A-chain to its target. Both toxins depurinate 28S rRNA, making it impossible to differentiate these toxins based on only their enzymatic activity. We developed an analytical workflow for both ricin and abrin using a single method and sample. We have developed a novel affinity enrichment technique based on the ability of the B-chain to bind a glycoprotein, asialofetuin. After the toxin is extracted with asialofetuin-coated magnetic beads, an RNA substrate is added. Then, depurination is detected by a benchtop matrix-assisted laser desorption/ionization time-of-flight (MALDI TOF) mass spectrometer to determine the presence or absence of an active toxin. Next, the beads are subjected to tryptic digest. Toxin fingerprinting is done on a benchtop MALDI-TOF MS. We validated the assay through sensitivity and specificity studies and determined the limit of detection for each toxin as nanogram level for enzymatic activity and μg level for toxin fingerprinting. We examined potential cross-reactivity from proteins that are near neighbors of the toxins and examined potential false results in the presence of white powders.
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  • 文章类型: Journal Article
    背景:CBM13家族包含主要存在于酶和几种蓖麻毒素-B凝集素中的碳水化合物结合模块。蓖麻毒素B凝集素结构域在很大程度上类似于CBM13模块。历史上,蓖麻毒素B凝集素和CBM13蛋白被认为是完全不同的,尽管它们的结构和功能相似。
    结果:在这项数据挖掘研究中,我们研究了这些交织在一起的蛋白质组的结构和功能相似性。由于结构和功能的高度相似性,以及几个数据库中命名使用的差异,可能会出现混乱。首先,我们演示了公共蛋白质数据库如何使用不同的命名系统来描述CBM13模块和推定的蓖麻毒素B凝集素结构域。我们建议引入一个新的CBM13域标识符,以及UniProt中CAZy交叉引用的扩展,以保护公共数据库中CAZy和非CAZy条目之间的区别。由于其他凝集素家族和CBM家族可能会出现类似的问题,我们建议在所有现有CBM家族中引入新的CBMInterPro域标识符.第二,我们调查了系统发育,推定的蓖麻毒素B凝集素结构域和CBM13模块之间的命名和结构相似性,利用序列相似性网络。我们得出的结论是,蓖麻毒素B/CBM13超家族可能比最初认为的要大,并且几个推定的蓖麻毒素B凝集素结构域可能显示CAZyme功能,尽管生化证据仍有待提供。
    结论:蓖麻毒素B凝集素结构域和CBM13模块是相关的蛋白质组,其数据库语义目前偏向蓖麻毒素B凝集素。在UniProt中的CAZy交叉引用的修订和在InterPro中的专用CBM13域标识符的引入可以解决此问题。此外,我们的分析表明,几种具有推定的蓖麻毒素B凝集素结构域的蛋白质与CBM13模块显示出非常强的结构相似性。因此,蓖麻毒素-B凝集素结构域和CBM13模块可被认为是较大蓖麻毒素-B/CBM13超家族的远隔成员。
    BACKGROUND: The CBM13 family comprises carbohydrate-binding modules that occur mainly in enzymes and in several ricin-B lectins. The ricin-B lectin domain resembles the CBM13 module to a large extent. Historically, ricin-B lectins and CBM13 proteins were considered completely distinct, despite their structural and functional similarities.
    RESULTS: In this data mining study, we investigate structural and functional similarities of these intertwined protein groups. Because of the high structural and functional similarities, and differences in nomenclature usage in several databases, confusion can arise. First, we demonstrate how public protein databases use different nomenclature systems to describe CBM13 modules and putative ricin-B lectin domains. We suggest the introduction of a novel CBM13 domain identifier, as well as the extension of CAZy cross-references in UniProt to guard the distinction between CAZy and non-CAZy entries in public databases. Since similar problems may occur with other lectin families and CBM families, we suggest the introduction of novel CBM InterPro domain identifiers to all existing CBM families. Second, we investigated phylogenetic, nomenclatural and structural similarities between putative ricin-B lectin domains and CBM13 modules, making use of sequence similarity networks. We concluded that the ricin-B/CBM13 superfamily may be larger than initially thought and that several putative ricin-B lectin domains may display CAZyme functionalities, although biochemical proof remains to be delivered.
    CONCLUSIONS: Ricin-B lectin domains and CBM13 modules are associated groups of proteins whose database semantics are currently biased towards ricin-B lectins. Revision of the CAZy cross-reference in UniProt and introduction of a dedicated CBM13 domain identifier in InterPro may resolve this issue. In addition, our analyses show that several proteins with putative ricin-B lectin domains show very strong structural similarity to CBM13 modules. Therefore ricin-B lectin domains and CBM13 modules could be considered distant members of a larger ricin-B/CBM13 superfamily.
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  • 文章类型: Journal Article
    免疫复合物在调节粘膜组织中的适应性免疫中的潜在贡献仍然知之甚少。在这份报告中,我们检查了,在老鼠身上,通过鼻内递送生物毒剂蓖麻毒素(RT)与两种毒素中和的单克隆抗体引起的促炎反应,SylH3和PB10。我们先前证明,蓖麻毒素免疫复合物(RIC)诱导高滴度毒素中和抗体的快速发作,持续数月。我们现在证明,这种反应依赖于CD4+T细胞的帮助,因为用抗CD4mAb治疗小鼠可在鼻内RIC暴露后消除RT特异性Ab的发作.为了确定与RIC暴露相关的炎症环境,我们收集了小鼠通过鼻内途径接受RT或RICs后6,12和18h的支气管肺泡灌洗液(BALF)和血清.32重细胞计数珠阵列显示RT引起的炎症谱主要由IL-6(BALF>1500倍增加)和其次由KC(CXCL1)引起,G-CSF,GM-CSF,和MCP-1。RIC在BALF和血清反应中诱导的炎症谱与RT相似,尽管水平明显下降。这些结果表明,RIC保留了诱导局部和全身性炎症细胞因子/趋化因子的能力,反过来,可能会影响肺粘膜和引流淋巴结中的Ag采样和呈现。更好地了解鼻内递送后免疫复合物的命运对于开发用于生物反应器和新出现的传染病的粘膜疫苗具有重要意义。
    The underlying contribution of immune complexes in modulating adaptive immunity in mucosal tissues remains poorly understood. In this report, we examined, in mice, the proinflammatory response elicited by intranasal delivery of the biothreat agent ricin toxin (RT) in association with two toxin-neutralizing mAbs, SylH3 and PB10. We previously demonstrated that ricin-immune complexes (RICs) induce the rapid onset of high-titer toxin-neutralizing Abs that persist for months. We now demonstrate that such responses are dependent on CD4+ T cell help, because treatment of mice with an anti-CD4 mAb abrogated the onset of RT-specific Abs following intranasal RICs exposure. To define the inflammatory environment associated with RIC exposure, we collected bronchoalveolar lavage fluid (BALF) and sera from mice 6, 12, and 18 h after they had received RT or RICs by the intranasal route. A 32-plex cytometric bead array revealed an inflammatory profile elicited by RT that was dominated by IL-6 (>1500-fold increase in BALF) and secondarily by KC (CXCL1), G-CSF, GM-CSF, and MCP-1. RICs induced inflammatory profiles in both BALF and serum response that were similar to RT, albeit at markedly reduced levels. These results demonstrate that RICs retain the capacity to induce local and systemic inflammatory cytokines/chemokines that, in turn, may influence Ag sampling and presentation in the lung mucosa and draining lymph nodes. A better understanding of the fate of immune complexes following intranasal delivery has implications for the development of mucosal vaccines for biothreats and emerging infectious diseases.
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  • 文章类型: Journal Article
    EuroBioTox联盟生产了蓖麻毒素(CRM-LS-1)的认证参考材料,以标准化该生物毒素的分析。这项研究建立了蓖麻毒素CRM-LS-1的N-聚糖结构和比例,包括其基因座和占有率。将聚糖谱与来自不同制剂和其他品种和同工型的蓖麻毒素进行了比较。在CRM-LS-1中鉴定出总共15种不同的寡聚体或寡聚体结构。毛甘露糖主要存在于A链内,而寡甘露糖构成B链的主要聚糖类型。此外,阐明了新的一级结构变体E138和D138和A链的四个不同的C末端以及两个B链变体V250和F250。虽然所有品种的CRM-LS-1和蓖麻毒蛋白同工型D和E的所有变体中的聚糖比例和基因座相似,发现了同工型D和E以及氨基酸变体的不同化学计量。蓖麻毒素关于聚糖谱和氨基酸序列变异的这种详细的物理化学表征产生了对这种蛋白质毒素的分子特征的前所未有的了解。在不同品种中发现的可变属性呈现特征基序,并可能允许区分生物毒素的起源,这在分子法医分析中很重要。总之,我们深入的CRM-LS-1表征数据结合对其他品种的分析,对于已知的蓖麻毒素变体具有代表性.
    A certified reference material of ricin (CRM-LS-1) was produced by the EuroBioTox consortium to standardise the analysis of this biotoxin. This study established the N-glycan structures and proportions including their loci and occupancy of ricin CRM-LS-1. The glycan profile was compared with ricin from different preparations and other cultivars and isoforms. A total of 15 different oligomannosidic or paucimannosidic structures were identified in CRM-LS-1. Paucimannose was mainly found within the A-chain and oligomannose constituted the major glycan type of the B-chain. Furthermore, the novel primary structure variants E138 and D138 and four different C-termini of the A-chain as well as two B-chain variants V250 and F250 were elucidated. While the glycan proportions and loci were similar among all variants in CRM-LS-1 and ricin isoforms D and E of all cultivars analysed, a different stoichiometry for isoforms D and E and the amino acid variants were found. This detailed physicochemical characterization of ricin regarding the glycan profile and amino acid sequence variations yields unprecedented insight into the molecular features of this protein toxin. The variable attributes discovered within different cultivars present signature motifs and may allow discrimination of the biotoxin\'s origin that are important in molecular forensic profiling. In conclusion, our data of in-depth CRM-LS-1 characterization combined with the analysis of other cultivars is representative for known ricin variants.
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  • 文章类型: Journal Article
    蓖麻毒素和abrin是非常有效的植物衍生毒素,分类为II型核糖体失活蛋白。高毒性,可访问性,缺乏有效的对策使其成为生物恐怖主义和生物战的潜在代理人,对公共安全构成重大威胁。尽管存在许多检测这两种致命毒素的有效分析策略,目前的方法往往受到灵敏度不足等限制的阻碍,复杂的样品制备,最重要的是,无法区分生物活性和非活性毒素。在这项研究中,开发了一种细胞毒性测定法,以检测活性蓖麻毒素和相思毒素,基于其强大的细胞杀伤能力。在九种来自不同器官的人类细胞系中,HeLa细胞表现出异常的敏感性,蓖麻毒素和abrin的检测限达到0.3ng/mL和0.03ng/mL,分别。随后,毒素特异性中和单克隆抗体MIL50和10D8被用来促进蓖麻毒素和相思子的精确鉴定和区分。该方法在包括牛奶在内的复杂基质中提供了简单而灵敏的检测,等离子体,咖啡,橙汁,和茶通过一个简单的连续稀释程序没有任何复杂的纯化和富集步骤。此外,该方法已成功应用于对禁化武组织生物毒素实验样品中的活性蓖麻毒素和相思子蛋白的明确鉴定。
    Ricin and abrin are highly potent plant-derived toxins, categorized as type II ribosome-inactivating proteins. High toxicity, accessibility, and the lack of effective countermeasures make them potential agents in bioterrorism and biowarfare, posing significant threats to public safety. Despite the existence of many effective analytical strategies for detecting these two lethal toxins, current methods are often hindered by limitations such as insufficient sensitivity, complex sample preparation, and most importantly, the inability to distinguish between biologically active and inactive toxin. In this study, a cytotoxicity assay was developed to detect active ricin and abrin based on their potent cell-killing capability. Among nine human cell lines derived from various organs, HeLa cells exhibited exceptional sensitivity, with limits of detection reaching 0.3 ng/mL and 0.03 ng/mL for ricin and abrin, respectively. Subsequently, toxin-specific neutralizing monoclonal antibodies MIL50 and 10D8 were used to facilitate the precise identification and differentiation of ricin and abrin. The method provides straightforward and sensitive detection in complex matrices including milk, plasma, coffee, orange juice, and tea via a simple serial-dilution procedure without any complex purification and enrichment steps. Furthermore, this assay was successfully applied in the unambiguous identification of active ricin and abrin in samples from OPCW biotoxin exercises.
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  • 文章类型: Journal Article
    蓖麻毒素是已知的毒性最强的物质之一,是一种B型生物试剂。由大肠杆菌(STEC)和痢疾志贺氏菌产生的志贺毒素(Stxs)是食源性病原体。没有针对蓖麻毒素或STEC的有效疗法,并且迫切需要抑制剂。蓖麻毒素A亚基(RTA)和Stx2a的A1亚基(Stx2A1)与核糖体P-茎蛋白的C末端结构域(CTD)结合,以对sarcin/蓖麻毒素环进行纯化。尚未探索调节毒素-核糖体相互作用作为抑制策略。因此,检测毒素-核糖体相互作用抑制剂的检测方法的开发仍然是一个关键的需求。在这里,我们描述了一种基于荧光各向异性(FA)的竞争性结合测定,使用衍生自P茎CTD的BODIPY-TMR标记的11聚体肽(P11)来测量3-11个氨基酸的肽对RTA和Stx2A1的P茎袋的结合亲和力。与表面等离子体共振(SPR)测定的亲和力比较表明,尽管两种方法的等级顺序相同,FA测定可以更好地区分通过SPR显示非特异性相互作用的肽。FA测定仅检测与标记的P11竞争的相互作用,并且可以验证抑制剂特异性和作用机制。
    Ricin is one of the most toxic substances known and a type B biothreat agent. Shiga toxins (Stxs) produced by E. coli (STEC) and Shigella dysenteriae are foodborne pathogens. There is no effective therapy against ricin or STEC and there is an urgent need for inhibitors. Ricin toxin A subunit (RTA) and A1 subunit of Stx2a (Stx2A1) bind to the C-terminal domain (CTD) of the ribosomal P-stalk proteins to depurinate the sarcin/ricin loop. Modulation of toxin-ribosome interactions has not been explored as a strategy for inhibition. Therefore, development of assays that detect inhibitors targeting toxin-ribosome interactions remains a critical need. Here we describe a fluorescence anisotropy (FA)-based competitive binding assay using a BODIPY-TMR labeled 11-mer peptide (P11) derived from the P-stalk CTD to measure the binding affinity of peptides ranging from 3 to 11 amino acids for the P-stalk pocket of RTA and Stx2A1. Comparison of the affinity with the surface plasmon resonance (SPR) assay indicated that although the rank order was the same by both methods, the FA assay could differentiate better between peptides that show nonspecific interactions by SPR. The FA assay detects only interactions that compete with the labeled P11 and can validate inhibitor specificity and mechanism of action.
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