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  • 文章类型: Journal Article
    快速病毒识别对于防止疫情爆发至关重要。COVID-19大流行凸显了快速病毒检测的关键性质。这里,我们设计了一种用金纳米粒子(AuNPs)修饰的无标记电化学生物传感器来检测人血清中的IgG抗体,实现快速的即时诊断。合成并表征AuNP。进行多变量优化以确定用抗IgG官能化AuNP的最佳条件。随后,使用玻碳电极(GCE),开发了一种用于IgG检测的修饰的AuNP/GCE电化学生物传感器。结果表明,AuNP呈现球形形态,尺寸分布为19.54nm。此外,zeta电位记录为-7.84mV.中央复合设计(CCD)分析确定了将AuNP功能化为320µgmL-1的抗IgG浓度,温度为25°C的最佳条件,pH为7.4。表征研究证实了AuNP的成功合成和官能化。通过电化学阻抗谱测量,该生物传感器的检测限(LOD)为0.2ngmL-1,定量限(LOQ)为0.8ngmL-1.此外,在实际样品中的测试显示血清样品中IgG抗体与AuNP/GCE之间的相互作用,确认生物传感器在临床样本中检测和定量IgG的能力。
    Rapid virus identification is crucial for preventing outbreaks. The COVID-19 pandemic has highlighted the critical nature of rapid virus detection. Here, we designed a label-free electrochemical biosensor modified with gold nanoparticles (AuNPs) to detect IgG antibodies from human serum, enabling rapid point-of-care diagnostics. AuNPs were synthesized and characterized. A multivariate optimization was carried out to determine the optimal condition for functionalizing AuNPs with anti-IgG. Subsequently, using a glassy carbon electrode (GCE), a modified AuNPs/GCE electrochemical biosensor was developed for IgG detection. The results indicated that AuNPs displayed a spherical morphology with a size distribution of 19.54 nm. Additionally, the zeta potential was recorded at -7.84 mV. Central composite design (CCD) analysis determined the optimal conditions for functionalizing AuNPs to be an anti-IgG concentration of 320 µg mL-1, a temperature of 25 °C, and pH of 7.4. The characterization study confirmed the successful synthesis and functionalization of AuNPs. Through electrochemical impedance spectroscopy measurement, the biosensor demonstrated a limit of detection (LOD) of 0.2 ng mL-1 and limit of quantification (LOQ) of 0.8 ng mL-1. Furthermore, tests in real samples showed the interaction between IgG antibodies in serum samples and AuNPs/GCE, confirming the biosensor\'s ability to detect and quantify IgG in clinical samples.
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  • 文章类型: Journal Article
    在这项研究中,我们采用了HPD100单细胞分配器-一种新型的低成本热喷墨(TIJ)平台,具有基于阻抗的单细胞检测功能-用于分配单个细胞和一罐样品制备。我们使用与AcquityUPLCM类系统或VanquishNeoUHPLC系统耦合的OrbitrapFusionLumos质谱仪,在单次运行中反复实现了对单个细胞中多达1300种蛋白质的无标记鉴定。开发的样品处理工作流程是高度可重复的,健壮,并适用于标准化的384孔和1536孔微孔板,以及玻璃LC小瓶。我们证明了该方法对来自多个细胞系的单细胞的蛋白质组学的适用性,混合细胞悬浮液,和胶质母细胞瘤肿瘤球体。作为稳健性的额外证明,我们监测了遗传操作的结果和单个细胞中工程蛋白的表达。我们具有成本效益和强大的单细胞蛋白质组学工作流程可以转移到其他对在单个细胞水平上研究细胞感兴趣的实验室。
    In this study, we adapted an HP D100 Single Cell Dispenser - a novel low-cost thermal inkjet (TIJ) platform with impedance-based single cell detection - for dispensing of individual cells and one-pot sample preparation. We repeatedly achieved label-free identification of up to 1,300 proteins from a single cell in a single run using an Orbitrap Fusion Lumos Mass Spectrometer coupled to either an Acquity UPLC M-class system or a Vanquish Neo UHPLC system. The developed sample processing workflow is highly reproducible, robust, and applicable to standardized 384- and 1536-well microplates, as well as glass LC vials. We demonstrate the applicability of the method for proteomics of single cells from multiple cell lines, mixed cell suspensions, and glioblastoma tumor spheroids. As additional proof of robustness, we monitored the results of genetic manipulations and the expression of engineered proteins in individual cells. Our cost-effective and robust single-cell proteomics workflow can be transferred to other labs interested in studying cells at the individual cell level.
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  • 文章类型: Journal Article
    活体细胞无标记成像的微观生物屏障,通常称为“紧密连接”,是通过最近开发的双电层调制成像(EDLMI)实现的。该方法可以实时对屏障完整性进行定量成像,因此是跨上皮电阻(TEER)的上限,TEER是评估空间平均屏障完整性的常规标准技术。我们证明了EDLMI的定量和实时成像能力揭示了生物屏障的基本动力学,其中一些与传统理解完全不同。
    Live-cell label-free imaging of a microscopic biological barrier, generally referred to as \'tight junction\', was realized by a recently developed electric-double-layer modulation imaging (EDLMI). The method allowed quantitative imaging of barrier integrity in real time, thus being an upper compatible of transepithelial electrical resistance (TEER) which is a conventional standard technique to evaluate spatially averaged barrier integrity. We demonstrate that the quantitative and real-time imaging capability of EDLMI unveils fundamental dynamics of biological barrier, some of which are totally different from conventional understandings.
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  • 文章类型: Journal Article
    这项工作研究了从经过各种温度处理的山羊奶中获得的乳清蛋白的功能变化。超高温瞬时灭菌(UHTIS)造成的伤害比普通低温小,而喷雾干燥处理具有相反的效果。在UHTIS和对照治疗组中总共鉴定出426种蛋白质,包括386种常见蛋白质和16种和14种独特的蛋白质。UHTIS处理上调55种乳清蛋白,同时下调98种。UHTIS处理的乳清蛋白可以上调三种代谢途径,但下调一种。总的来说,与常见的低温处理相比,UHTIS仅轻微影响来自山羊奶的乳清蛋白的组成和功能。
    This work investigated the functional changes in whey proteins obtained from goat milk subject to various temperature treatments. Ultra-high temperature instantaneous sterilization (UHTIS) caused less damage than the common low-temperature, whereas spray-drying treatment had the opposite effect. A total of 426 proteins were identified in UHTIS and control treatment groups, including 386 common proteins and 16 and 14 unique proteins. The UHTIS treatment upregulated 55 whey proteins while down-regulated 98. The UHTIS-treated whey proteins may upregulate three metabolic pathways but downregulate one. Overall, UHTIS only slightly impacted the composition and functions of whey proteins from goat milk compared to the common low-temperature treatments.
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  • 文章类型: Journal Article
    背景:快速,灵敏地检测食品中的食源性病原体在控制食源性疾病的暴发中起着至关重要的作用。其中单核细胞增生李斯特菌和鼠伤寒沙门氏菌是代表性和值得注意的病原体。因此,实现对这些病原体的有效检测具有重要意义。然而,最常见的检测方法(基于培养的技术,聚合酶链反应和免疫学方法)具有不可忽视的缺点,例如耗时,辛苦,复杂的样品制备过程,以及交叉反应的可能性。因此,为了避免上述缺点,有必要开发一种高灵敏度和特异性的病原体检测方法。
    结果:我们报告了一个无标签的可视化平台,用于同时捕获和检测单核细胞增生李斯特菌和鼠伤寒沙门氏菌。第一次,我们已经制备了聚二甲基硅氧烷-Chromotrope2R膜,该膜通过形成特定的识别位点作为细菌捕获和富集的底物。带正电荷的Pt共价有机骨架通过表面电荷相互作用与病原体结合,从而形成无标签夹层平台。Pt共价有机骨架的显著过氧化物酶活性通过催化3,3\'将细菌数量的转化转化为放大的颜色信号,5,5'-四甲基联苯胺氧化至3,3',5,5'-四甲基联苯胺。该平台展示了在100分钟的时间范围内识别两种代表性食源性病原体的能力,在不受非靶标细菌干扰的情况下,表现出高灵敏度和优异的特异性。视觉平台对单核细胞增生李斯特菌和鼠伤寒沙门氏菌的检测极限分别为1.61CFUmL-1和1.31CFUmL-1。单核细胞增生李斯特菌和鼠伤寒沙门氏菌的定量限分别为4.94CFUmL-1和2.47CFUmL-1。两种细菌的视觉平台的相对标准导数低于4.9%。此外,我们提出的平台在分析各种食品样品方面获得了可靠和令人满意的结果。
    结论:这项研究扩展了无标签平台与未标记的纳米组分结合在快速分离和检测各种食源性病原体中的应用。该平台具有操作简单、实时监控等优点,无需复杂的样品预处理过程。整个检测过程可在100min内实现单核细胞增生李斯特菌和鼠伤寒沙门氏菌的同时监测。此外,对其他常见病原体的检测也有借鉴意义。
    BACKGROUND: Rapid and sensitive detection of foodborne pathogens in food plays a crucial role in controlling outbreaks of foodborne diseases, of which Listeria monocytogenes and Salmonella typhimurium are representative and notable pathogens. Thus, it\'s of great importance to achieve the effective detection of these pathogens. However, the most common detection methods (culture-based technique, Polymerase Chain Reaction and immunological methods) have disadvantages that cannot be ignored, such as time-consuming, laborious, complex sample preparation process, and the possibility of cross-reaction. Hence, it is essential to develop a facile detection method for the pathogens with high sensitivity and specificity to avoid the above-mentioned disadvantages.
    RESULTS: We report a label-free visual platform for the simultaneous capture and detection of Listeria monocytogenes and Salmonella typhimurium. For the first time, we have prepared polydimethylsiloxane-Chromotrope 2R membrane which serves as the substrate for bacterial capture and enrichment through the formation of specific recognition sites. The positively charged Pt-covalent organic framework combines with the pathogens through surface charge interaction, thereby the label-free sandwich platform is formed. Remarkable peroxidase activity of Pt-covalent organic framework converts the conversion of bacterial quantity into amplified color signal by catalyzing 3,3\',5,5\'-Tetramethylbenzidine to oxidized 3,3\',5,5\'-Tetramethylbenzidine. The platform demonstrates the capability to identify two representative food-borne pathogens within a time frame of 100 min, exhibiting high sensitivity and excellent specificity without the interference from non-target bacteria. The limit of detection of the visual platform toward Listeria monocytogenes and Salmonella typhimurium was 1.61 CFU mL-1 and 1.31 CFU mL-1, respectively. And the limit of quantification toward Listeria monocytogenes and Salmonella typhimurium was 4.94 CFU mL-1 and 2.47 CFU mL-1, respectively. The relative standard derivations of the visual platform for both bacteria were lower than 4.9 %. Furthermore, our proposed platform has obtained reliable and satisfactory results on analyzing diverse food samples.
    CONCLUSIONS: This research expands the application of a label-free platform combined with unlabeled nanocomponents in the rapid isolation and detection of diverse of food-borne pathogens. The platform possesses the advantages of simple operation and real-time monitoring, without complicated sample pretreatment process. The whole detection process can realize the simultaneous monitoring of Listeria monocytogenes and Salmonella typhimurium within 100 min. Furthermore, it is also of reference significance for the detection of other common pathogens.
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  • 文章类型: Journal Article
    G-四链体/硫黄素T(G4/THT)具有良好的可编程性和适应性,是生物传感器领域理想的无标记荧光发光元件之一。然而,单分子G4/THT不理想的发光效率限制了其更实际的应用。这里,我们通过对传统的CHA反应进行合理的修饰,开发了G4嵌入式半催化发夹组装(G4-SCHA)反应,结合侵入性反应,辅以磁选技术,用于单核苷酸多态性(SNP)的无标记灵敏检测。侵入性反应能够特异性识别DNA序列中的单碱基突变以及初步的信号循环扩增。然后,磁分离用于屏蔽假阳性信号。最后,G4-SCHA用于二次扩增和无标记输出信号.这种双信号放大的无标记生物传感器已显示可检测低至78.54fM的突变靶标。更重要的是,这种生物传感器可以从含有大量野生型靶标的混合样品中区分出0.01%的突变靶标。此外,真实和复杂生物样品的检测也验证了该生物传感器在分子设计育种领域的实际应用价值。因此,这项研究改进了无标签荧光发光元件,然后提出了一个简单的,高效和通用的无标记SNP生物传感策略,也为其他G4/THT基生物传感器的研制提供了重要参考。
    G-quadruplex/thioflavin T (G4/THT) is one of the ideal label-free fluorescent light-emitting elements in the field of biosensors due to its good programmability and adaptability. However, the unsatisfactory luminous efficiency of single-molecule G4/THT limits its more practical applications. Here, we developed a G4 embedded semi-catalytic hairpin assembly (G4-SCHA) reaction by rationally modifying the traditional CHA reaction, and combined with the invasive reaction, supplemented by magnetic separation technology, for label-free sensitive detection of single nucleotide polymorphisms (SNPs). The invasive reaction enabled specific recognition of single-base mutations in DNA sequences as well as preliminary signal cycle amplification. Then, magnetic separation was used to shield the false positive signals. Finally, the G4-SCHA was created for secondary amplification and label-free output of the signal. This dual-signal amplified label-free biosensor has been shown to detect mutant targets as low as 78.54 fM. What\'s more, this biosensor could distinguish 0.01 % of the mutant targets from a mixed sample containing a large number of wild-type targets. In addition, the detection of real and complex biological samples also verified the practical application value of this biosensor in the field of molecular design breeding. Therefore, this study improves a label-free fluorescent light-emitting element, and then proposes a simple, efficient and universal label-free SNP biosensing strategy, which also provides an important reference for the development of other G4/THT based biosensors.
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  • 文章类型: Journal Article
    利用位于G35'末端的相邻双链DNA催化的G-三链体(G3)/硫黄素T(ThT)的荧光增强作用,G3特异性寡核苷酸(G3MB6)用于通过胸腺嘧啶-Hg(II)-胸腺嘧啶(T-Hg(II)-T)相互作用促进汞(Hg(II))的快速检测。G3MB6采用发夹结构,其中部分互补链可以在Hg(II)的存在下被破坏。它促使T-Hg(II)-T形成双链DNA,诱导未结合的G3MB6单链自发形成平行的G3结构,通过ThT产生固体荧光信号。相反,无Hg(II)荧光,因为没有双链和G3的形成发生。G3MB6的荧光强度与Hg(II)浓度在17.72至300nM之间呈正相关(R2=0.9954),其质量限制(LOQ)明显较低,为17.72nM。此外,它显示了检测Hg(II)的显着选择性。在应用于检测牛奶样品中的Hg(II)时,回收率从100.3%上升到103.2%。
    Leveraging the fluorescence enhancement effect of the G-triplex (G3)/thioflavin T (ThT) catalyzed by the adjacent double-stranded DNA positioned at the 5\' terminus of the G3, the G3-specific oligonucleotide (G3MB6) was utilized to facilitate the rapid detection of mercury (Hg(II)) through thymine-Hg(II)-thymine (T-Hg(II)-T) interactions. G3MB6 adopted a hairpin structure in which partially complementary strands could be disrupted with the presence of Hg(II). It prompted the formation of double-stranded DNA by T-Hg(II)-T, inducing the unbound single strand of G3MB6 to spontaneously form a parallel G3 structure, producing a solid fluorescence signal by ThT. Conversely, fluorescence was absent without Hg(II), since no double strand and formation of G3 occurred. The fluorescence intensity of G3MB6 exhibited a positive correlation with Hg(II) concentrations from 17.72 to 300 nM (R2 = 0.9954), boasting a notably low quality of limitation (LOQ) of 17.72 nM. Additionally, it demonstrated remarkable selectivity for detecting Hg(II). Upon application to detect Hg(II) in milk samples, the recovery rates went from 100.3% to 103.2%.
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  • 文章类型: Journal Article
    化学传感器的重新配置,旨在作为传感器适应新操作场景的能力,例如,新的目标分析物,可能会改变游戏规则,并能够对医疗保健中发生的动态变化做出快速且具有成本效益的反应,环境,工业水平。然而,这仍然是一个挑战,迄今为止,已经报道了传感器重新配置的罕见例子。这里,我们报告了一种可重构的无标记光学传感器,该传感器利用螯合剂在纳米结构的多孔二氧化硅(PSiO2)光学传感器上对金属离子的通用固定来检测不同的生物分子。首先,我们显示了不同金属离子在PSiO2表面的可逆接枝,即,Ni2+,Cu2+,Zn2+,和Fe3+,它可以介导与不同生物分子的相互作用,并在温和的条件下切换。然后,我们证明了传感器在两个水平上的重新配置:1)将PSiO2表面上的金属离子从Cu2转换为Zn2,并测试了Cu2功能化和Zn2重新配置的设备对二肽肌肽(CAR)的传感能力,利用众所周知的CAR对二价金属离子的螯合能力;和2)对不同目标分析物的Cu2+功能化PSiO2传感器的重新配置,即,核苷酸三磷酸腺苷(ATP),用Fe3+离子切换Cu2+以利用通过磷酸基团与ATP的相互作用。Cu2+功能化和Zn2+重新配置的传感器在CAR检测中显示出有效的传感性能,还在鼠脑的组织样本中进行了评估,Fe3+-重新配置的传感器对ATP也是如此,从而证明了具有所提出的表面化学的传感器的有效重新配置。
    Reconfiguration of chemical sensors, intended as the capacity of the sensor to adapt to novel operational scenarios, e.g., new target analytes, is potentially game changing and would enable rapid and cost-effective reaction to dynamic changes occurring at healthcare, environmental, and industrial levels. Yet, it is still a challenge, and rare examples of sensor reconfiguration have been reported to date. Here, we report on a reconfigurable label-free optical sensor leveraging the versatile immobilization of metal ions through a chelating agent on a nanostructured porous silica (PSiO2) optical transducer for the detection of different biomolecules. First, we show the reversible grafting of different metal ions on the PSiO2 surface, namely, Ni2+, Cu2+, Zn2+, and Fe3+, which can mediate the interaction with different biomolecules and be switched under mild conditions. Then, we demonstrate reconfiguration of the sensor at two levels: 1) switching of the metal ions on the PSiO2 surface from Cu2+ to Zn2+ and testing the ability of Cu2+-functionalized and Zn2+-reconfigured devices for the sensing of the dipeptide carnosine (CAR), leveraging the well-known chelating ability of CAR toward divalent metal ions; and 2) reconfiguration of the Cu2+-functionalized PSiO2 sensor for a different target analyte, namely, the nucleotide adenosine triphosphate (ATP), switching Cu2+ with Fe3+ ions to exploit the interaction with ATP through phosphate groups. The Cu2+-functionalized and Zn2+-reconfigured sensors show effective sensing performance in CAR detection, also evaluated in tissue samples from murine brain, and so does the Fe3+-reconfigured sensor toward ATP, thus demonstrating effective reconfiguration of the sensor with the proposed surface chemistry.
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  • 文章类型: Journal Article
    聚合酶β(POLB),具有裂解酶和聚合酶的双重功能,在碱基切除修复(BER)途径中发挥关键作用,以维持基因组的稳定性。BRCA1/2突变癌细胞系中的POLB敲除和挽救研究表明,PARP抑制剂观察到的合成致死相互作用需要抑制裂解酶和聚合酶活性,强调POLB是一个有价值的治疗靶点。筛选酶抑制剂的传统生化测定集中在单一底物与产物的关系上,并限制了对利用多种底物或催化多步反应的酶如POLB的综合分析。该报告描述了第一个基于高通量质谱的屏幕,该屏幕使用双工自组装单层解吸电离(SAMDI)质谱方法在单个测定中测量POLB的两种不同的生化活性。开发了针对动力学平衡条件进行优化的POLB双酶活性的多重测定,并以双链形式筛选了200,000个不同小分子的集合。在传统的基于荧光的聚合酶链置换测定和使用SAMDI亲和选择质谱(ASMS)的正交无标记结合测定中确认了在筛选中鉴定的小分子调节剂。这项工作证明了高通量质谱方法在药物发现中的灵活性,并强调了SAMDI技术的新应用,为多路高通量筛选开辟了新途径。
    Polymerase β (POLB), with dual functionality as a lyase and polymerase, plays a critical role in the base excision repair (BER) pathway to maintain genomic stability. POLB knockout and rescue studies in BRCA1/2-mutant cancer cell lines revealed that inhibition of lyase and polymerase activity is required for the synthetic lethal interaction observed with PARP inhibitors, highlighting POLB as a valuable therapeutic target. Traditional biochemical assays to screen for enzyme inhibitors focus on a single substrate to product relationship and limit the comprehensive analysis of enzymes such as POLB that utilize multiple substrates or catalyze a multi-step reaction. This report describes the first high-throughput mass spectrometry-based screen to measure the two distinct biochemical activities of POLB in a single assay using a duplexed self-assembled monolayer desorption ionization (SAMDI) mass spectrometry methodology. A multiplexed assay for POLB dual enzymatic activities was developed optimizing for kinetically balanced conditions and a collection of 200,000 diverse small molecules was screened in the duplexed format. Small molecule modulators identified in the screen were confirmed in a traditional fluorescence-based polymerase strand-displacement assay and an orthogonal label-free binding assay using SAMDI affinity selection mass spectrometry (ASMS). This work demonstrates the flexibility of high-throughput mass spectrometry approaches in drug discovery and highlights a novel application of SAMDI technology that opens new avenues for multiplexed high-throughput screening.
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  • 文章类型: Journal Article
    在生物医学领域,有效和非侵入性地分离靶细胞一直是核心挑战之一。光纤镊子提供对培养基中细胞的精确和非侵入性操作,并且可以很容易地与微流体系统集成。因此,本文研究了光纤镊子利用散射力操纵细胞的机理。我们使用平端单模光纤驱动和分选细胞,并基于T矩阵模型得出相应的散射力公式。开发了一种用于细胞分选的单模光学镊子系统,并构建了光流控实验平台,将光学系统与微流控芯片有效集成。芯片,具有扩展的跨通道设计,成功实现了酵母细胞(直径8~10μm)和聚苯乙烯微球(直径15~20μm)的连续分离,分选效率高达86%,并在大约90%的酵母细胞中保持活力。与其他分拣系统相比,该系统不需要标记,并且可以以较低的仪器成本实现具有细胞活力的连续分选。
    In the field of biomedicine, efficiently and non-invasively isolating target cells has always been one of the core challenges. Optical fiber tweezers offer precise and non-invasive manipulation of cells within a medium and can be easily integrated with microfluidic systems. Therefore, this paper investigated the mechanism of cell manipulation using scattering force with optical fiber tweezers. We employed flat-ended single-mode fiber to drive and sort cells and derived the corresponding scattering force formula based on the T-matrix model. A single-mode optical tweezers system for cell sorting was developed, and an optofluidic experimental platform was constructed that effectively integrates the optical system with microfluidic chips. The chip, featuring an expanded cross-channel design, successfully achieved continuous separation of yeast cells (8~10 µm in diameter) and polystyrene microspheres (15~20 µm in diameter), with a sorting efficiency of up to 86% and maintaining viability in approximately 90% of the yeast cells. Compared to other sorting systems, this system does not require labeling and can achieve continuous sorting with cell viability at a lower cost of instrumentation.
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