Biological Sciences

生物科学
  • 文章类型: Journal Article
    在体内实时可视化和跟踪多个生物过程的能力是非常需要的。生物发光成像(BLI)已成为非侵入性细胞追踪的一种有吸引力的方式,与各种荧光素酶报告基因,使几个过程的并行监测。然而,体内同步多重成像是具有挑战性的,由于次优的报告强度和需要一次成像一个荧光素酶。我们报告了一种使用单个底物的多路复用BLI方法,该方法利用基于生物发光共振能量转移(BRET)的报告子,具有不同的光谱轮廓,用于三色BLI。这些荧光素酶-荧光团融合报告分子解决了光透射挑战并使用优化的腔肠素底物。比较两种底物类似物的BRET报道分子鉴定了绿-黄-橙色组合,其允许在体外和体内同时成像三种不同的细胞群体。这些工具提供了用于在单个BLI阶段期间使用单个报告底物对其他生物过程进行体内成像的模板。
    The ability to visualize and track multiple biological processes in vivo in real time is highly desirable. Bioluminescence imaging (BLI) has emerged as an attractive modality for non-invasive cell tracking, with various luciferase reporters enabling parallel monitoring of several processes. However, simultaneous multiplexed imaging in vivo is challenging due to suboptimal reporter intensities and the need to image one luciferase at a time. We report a multiplexed BLI approach using a single substrate that leverages bioluminescence resonance energy transfer (BRET)-based reporters with distinct spectral profiles for triple-color BLI. These luciferase-fluorophore fusion reporters address light transmission challenges and use optimized coelenterazine substrates. Comparing BRET reporters across two substrate analogs identified a green-yellow-orange combination that allows simultaneous imaging of three distinct cell populations in vitro and in vivo. These tools provide a template for imaging other biological processes in vivo during a single BLI session using a single reporter substrate.
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  • 文章类型: Journal Article
    线粒体-内质网(ER)接触位点(MERC)在许多细胞过程中发挥关键作用,它们的失调与神经退行性疾病有关。编码spastin的SPG4基因突变是遗传性痉挛性截瘫(HSP)的主要原因之一。Spastin结合并切断微管,和这种蛋白质的长同工型,即M1,跨越ER膜的外小叶,在那里它与其他ER-HSP蛋白相互作用。这里,我们显示过表达的M1痉挛蛋白定位于ER-线粒体交集,内源性痉挛蛋白在MERC中积累。我们在不同的细胞模型中证明,斯巴斯丁的下调增加了MERC的数量,改变线粒体形态,并损害ER和线粒体钙稳态。这些效应与线粒体膜电位降低有关,氧物种水平,和氧化代谢。这些发现扩展了我们对Spastin在ER中的作用的认识,并表明MERC失调是SPG4-HSP疾病的潜在原因。
    Mitochondria-endoplasmic reticulum (ER) contact sites (MERCs) emerged to play critical roles in numerous cellular processes, and their dysregulation has been associated to neurodegenerative disorders. Mutations in the SPG4 gene coding for spastin are among the main causes of hereditary spastic paraplegia (HSP). Spastin binds and severs microtubules, and the long isoform of this protein, namely M1, spans the outer leaflet of ER membrane where it interacts with other ER-HSP proteins. Here, we showed that overexpressed M1 spastin localizes in ER-mitochondria intersections and that endogenous spastin accumulates in MERCs. We demonstrated in different cellular models that downregulation of spastin enhances the number of MERCs, alters mitochondrial morphology, and impairs ER and mitochondrial calcium homeostasis. These effects are associated with reduced mitochondrial membrane potential, oxygen species levels, and oxidative metabolism. These findings extend our knowledge on the role of spastin in the ER and suggest MERCs deregulation as potential causes of SPG4-HSP disease.
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  • 文章类型: Journal Article
    化学突触传递被调节以适应不同的活动水平,从而实现突触前和突触后隔室的稳态缩放。在线虫中,胆碱能神经元使用神经肽信号调节突触小泡含量。为了探索这种机制在脊椎动物中是否保守,我们研究了神经肽在斑马鱼幼虫神经肌肉接头处的胆碱能传递中的作用。光活化腺苷酸环化酶的光遗传学刺激诱发运动。我们产生了缺乏神经肽加工酶羧肽酶E(cpe)的突变体,运动神经元中最丰富的神经肽前体,速激肽(tac1)。两种突变体在光刺激后都显示出夸张的运动。在野生型中,记录的兴奋性突触后电流显示出总体上较大的振幅。因此,突变体的夸张运动反映了突触后兴奋性的提高。两种突变肌肉在其表面表达更多的烟碱乙酰胆碱受体(nAChRs);因此,神经肽信号调节斑马鱼运动神经元的突触递质输出,和肌肉细胞稳态调节nAChR表面表达,补偿减少的突触前输入。
    Chemical synaptic transmission is modulated to accommodate different activity levels, thus enabling homeostatic scaling in pre- and postsynaptic compartments. In nematodes, cholinergic neurons use neuropeptide signaling to modulate synaptic vesicle content. To explore if this mechanism is conserved in vertebrates, we studied the involvement of neuropeptides in cholinergic transmission at the neuromuscular junction of larval zebrafish. Optogenetic stimulation by photoactivated adenylyl cyclase evoked locomotion. We generated mutants lacking the neuropeptide-processing enzyme carboxypeptidase E (cpe), and the most abundant neuropeptide precursor in motor neurons, tachykinin (tac1). Both mutants showed exaggerated locomotion after photostimulation. Recording excitatory postsynaptic currents demonstrated overall larger amplitudes in the wild type. Exaggerated locomotion in the mutants thus reflected upscaling of postsynaptic excitability. Both mutant muscles expressed more nicotinic acetylcholine receptors (nAChRs) on their surface; thus, neuropeptide signaling regulates synaptic transmitter output in zebrafish motor neurons, and muscle cells homeostatically regulate nAChR surface expression, compensating reduced presynaptic input.
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  • 文章类型: Journal Article
    视觉感知是由不断移动的眼睛制定和约束的。尽管众所周知,前两个固定对于面部识别至关重要,每个固定的功能仍未指明。在这里,我们演示了两种注视的中心到发散的模式,并指定了它们的功能:FixI沿着鼻梁聚集以覆盖广泛的面部信息;FixII发散到眼睛,鼻孔,和嘴唇获取当地信息。FixII比FixI与人脸之间的区分信息相关,并且对识别响应的贡献更大。虽然面部类别可以通过FixII的模式而不是FixI的模式来显著区分,两者的结合模式产生更好的区分度。我们的结果表明,在对一般到特定面部信息进行采样时,两种固定方式的功能划分和协作,并将理解视觉感知作为结构运动程序进行的主动过程。
    Visual perception is enacted and constrained by the constantly moving eyes. Although it is well known that the first two fixations are crucial for face recognition, the function of each fixation remains unspecified. Here we demonstrate a central-to-divergent pattern of the two fixations and specify their functions: Fix I clustered along the nose bridge to cover the broad facial information; Fix II diverged to eyes, nostrils, and lips to get the local information. Fix II correlated more than Fix I with the differentiating information between faces and contributed more to recognition responses. While face categories can be significantly discriminated by Fix II\'s but not Fix I\'s patterns alone, the combined patterns of the two yield better discrimination. Our results suggest a functional division and collaboration of the two fixations in sampling the general-to-specific facial information and add to understanding visual perception as an active process undertaken by structural motor programs.
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  • 文章类型: Journal Article
    规范非同源末端连接(C-NHEJ)的关键步骤是用于连接的DNA双链断裂(DSB)末端的突触。DNA-PKcs二聚体介导长范围复合物中的突触,DSB末端分开,而XLF同二聚体可以介导远程和短程复合物中的突触。最近的结构研究发现,PAXX同二聚体也可能通过与Ku70的相互作用促进与DNA-PKcs的远程复合物的突触。因此,我们检查了PAXX在染色体DSB的C-NHEJ中的影响,我们将其与另一个Ku结合因子进行比较,MRI。使用带有Cas9报道分子的钝DSB的EJ作为C-NHEJ的读数,我们发现PAXX和/或MRI可有可无.然而,当与DNA-PKcs的破坏相结合时,特别是DNA-PKcs激酶抑制,PAXX对于钝性DSBEJ变得重要。相比之下,虽然DNA-PKcs对抑制具有微同源性的短缺失突变也很重要,这种影响不会随着PAXX损失而放大。MRI丢失与DNA-PKcs破坏没有影响,但是当与XLF的破坏相结合时,对于钝的DSBEJ变得很重要,PAXX也是如此。最后,与DNA-PKcs抑制相比,XLF丢失导致更大的缺失增加,随着MRI的合并丢失而放大。总之,我们建议PAXX在C-NHEJ期间以DNA-PKcs和XLF部分冗余的方式促进DSB末端突触,而MRI似乎在XLF破坏的背景下主要很重要。
    A key step of Canonical Nonhomologous End Joining (C-NHEJ) is synapsis of DNA double strand break (DSB) ends for ligation. The DNA-PKcs dimer mediates synapsis in a long-range complex with DSB ends remaining apart, whereas the XLF homodimer can mediate synapsis in both long-range and short-range complexes. Recent structural studies found the PAXX homodimer may also facilitate synapsis in long-range complexes with DNA-PKcs via its interactions with Ku70. Thus, we examined the influence of PAXX in C-NHEJ of chromosomal DSBs, which we compared to another Ku-binding factor, MRI. Using EJ of blunt DSBs with Cas9 reporters as a readout for C-NHEJ, we found that PAXX and/or MRI are dispensable. However, when combined with disruption of DNA-PKcs, particularly with DNA-PKcs kinase inhibition, PAXX becomes important for blunt DSB EJ. In contrast, while DNA-PKcs is also important to suppress short deletion mutations with microhomology, this effect is not magnified with PAXX loss. MRI loss had no effect combined with DNA-PKcs disruption, but becomes important for blunt DSB EJ when combined with disruption of XLF, as is PAXX. Finally, XLF loss causes an increase in larger deletions compared to DNA-PKcs inhibition, which is magnified with combined loss of MRI. Altogether, we suggest that PAXX promotes DSB end synapsis during C-NHEJ in a manner that is partially redundant with DNA-PKcs and XLF, whereas MRI appears to be mainly important in the context of XLF disruption.
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  • 文章类型: Journal Article
    脓毒症诱发的心律失常,与心脏性猝死有关,与肠道微生物群有关,尽管确切的关系尚不清楚。本研究旨在阐明与Sakazakii(C.Sakazakii)和心律不齐。在盲肠结扎穿孔(CLP)诱导的脓毒症小鼠中,相对丰度增加。活C.Sakazaki,上清液和外膜囊泡(OMV)导致室性早搏(PVB),窦性心律失常(SA),通过离子通道蛋白失调增加脓毒症模型的心律失常和死亡率。此外,短链脂肪酸(SCFAs)在体外具有抗菌作用。我们证实了乙酸钠(C2)和丁酸钠(C4)对Sakazakii引起的心律失常的保护作用。和C2和C4通过激活小鼠中的游离脂肪酸受体2和3(FFAR2和FFAR3)来保护免于败血症性心律失常。这些发现指出了Sakazakii的OMV如何引发心律失常,和SCFA可能是一种治疗败血症性心律失常。
    Sepsis-induced arrhythmia, linked to sudden cardiac death, is associated with gut microbiota, though the exact relationship is unclear. This study aimed to elucidate the relationship between Cronobacter sakazakii (C. sakazakii) and arrhythmia. The relative abundance of C. sakazakii was increased in cecal ligation and puncture (CLP)-induced septic mice. Live C. sakazakii, supernatant, and outer membrane vesicles (OMVs) resulted in premature ventricular beat (PVB), sinus arrhythmia (SA), and increased arrhythmia and mortality in sepsis model through dysregulated ion channel proteins. Moreover, short-chain fatty acids (SCFAs) showed antibacterial effects in vitro. We confirmed sodium acetate (C2) and sodium butyrate (C4) protect from C. sakazakii-induced arrhythmia, and C2 and C4 protected from septic arrhythmia by activating free fatty acid receptor 2 and 3 (FFAR2 and FFAR3) in mice. These findings point to how C. sakazakii\'s OMVs trigger arrhythmia, and SCFAs may be a treatment for septic arrhythmia.
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  • 文章类型: Journal Article
    内分泌腺分泌激素进入循环以靶向远处组织并调节其功能。激素分泌器官与其靶组织之间的定性关系已得到很好的确立,但定量方法目前是有限的。量化很重要,因为它可以使我们使用最优性和折衷的工程概念来研究内分泌系统。在这项研究中,我们收集了由专用内分泌细胞分泌的24种人类激素的文献数据.我们发现分泌激素的内分泌细胞的数量与其靶细胞的数量成正比。单个内分泌细胞服务于大约2,000个靶细胞,跨越细胞数6个数量级的关系。这表明细胞在其最大容量附近工作的经济原理,和腺体没有比它们需要的大。
    Endocrine glands secrete hormones into the circulation to target distant tissues and regulate their functions. The qualitative relationship between hormone-secreting organs and their target tissues is well established, but a quantitative approach is currently limited. Quantification is important, as it could allow us to study the endocrine system using engineering concepts of optimality and tradeoffs. In this study, we collected literature data on 24 human hormones secreted from dedicated endocrine cells. We find that the number of endocrine cells secreting a hormone is proportional to the number of its target cells. A single endocrine cell serves approximately 2,000 target cells, a relationship that spans 6 orders of magnitude of cell numbers. This suggests an economic principle of cells working near their maximal capacity, and glands that are no bigger than they need to be.
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  • 文章类型: Journal Article
    铁凋亡与几种疾病有关,包括铁过载诱导的骨关节炎(IOOA),以氧化应激为标志,铁失衡,和脂质过氧化。鉴于罗格列酮(RSG)抑制脂质过氧化和铁凋亡的能力,本研究旨在评估其治疗IOOA的潜力.我们的体外结果表明,RSG靶向酰基辅酶A合成酶长链家族成员4,以减轻白细胞介素-1β和柠檬酸铁铵诱导的损伤,包括细胞凋亡,衰老,炎症反应,细胞外基质降解,和铁中毒。RSG降低细胞内铁含量,减轻氧化应激和脂质过氧化,减轻对膜结合细胞器的损害,和增强葡萄糖转运。此外,用RSG预处理赋予软骨细胞抗铁性。在体内,RSG缓解软骨降解,炎症反应,和患有IOOA的小鼠的铁性凋亡。总之,RSG通过抑制脂质过氧化和恢复铁稳态表现出软骨保护和抗铁作用。强调其治疗IOOA的潜力。
    Ferroptosis is implicated in several diseases, including iron overload-induced osteoarthritis (IOOA), which is marked by oxidative stress, iron imbalance, and lipid peroxidation. Given rosiglitazone\'s (RSG) ability to inhibit lipid peroxidation and ferroptosis, this study aims to assess its therapeutic potential for treating IOOA. Our in vitro results show that RSG targets acyl-CoA synthetase long-chain family member 4 to mitigate impairments induced by interleukin-1 beta and ferric ammonium citrate, including cell apoptosis, senescence, inflammatory responses, extracellular matrix degradation, and ferroptosis. RSG reduced intracellular iron content, alleviated oxidative stress and lipid peroxidation, mitigated damage to membrane-bound organelles, and enhanced glucose transport. Additionally, pre-treatment with RSG imparted anti-ferroptotic properties to chondrocytes. In vivo, RSG alleviated cartilage degradation, inflammatory responses, and ferroptosis in mice with IOOA. In conclusion, RSG exhibits chondroprotective and anti-ferroptotic effects by suppressing lipid peroxidation and restoring iron homeostasis, highlighting its potential for treating IOOA.
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  • 文章类型: Journal Article
    抗体代表针对呼吸道病毒的保护的主要介质。血清中和抗体(NAb)通常被认为是保护的主要相关性。然而,详细的抗体谱,包括不同解剖区室中抗体功能的表征,人们知之甚少。在这里,我们表明,在恒河猴的全身和粘膜区室中,针对严重急性呼吸综合征冠状病毒2(SARS-CoV-2)攻击的抗体与保护相关。在血清中,NAb是保护的最强相关性,并且与产生更大的保护网络的刺突特异性结合抗体和其他额外NAb功能相关联。在细支气管灌洗(BAL)中,抗体依赖性细胞吞噬作用(ADCP)被证明是保护作用的最强相关性,而不是NAb。在BAL内,ADCP与粘膜刺突特异性免疫球蛋白(Ig)G相关,IgA/分泌型IgA,和Fcγ受体结合抗体。我们的结果支持一个模型,其中具有不同功能的抗体在不同的解剖部位介导保护。
    Antibodies represent a primary mediator of protection against respiratory viruses. Serum neutralizing antibodies (NAbs) are often considered a primary correlate of protection. However, detailed antibody profiles including characterization of antibody functions in different anatomic compartments are poorly understood. Here we show that antibody correlates of protection against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) challenge are different in systemic versus mucosal compartments in rhesus macaques. In serum, NAbs were the strongest correlate of protection and linked to spike-specific binding antibodies and other extra-NAb functions that create a larger protective network. In bronchiolar lavage (BAL), antibody-dependent cellular phagocytosis (ADCP) proved the strongest correlate of protection rather than NAbs. Within BAL, ADCP was linked to mucosal spike-specific immunoglobulin (Ig)G, IgA/secretory IgA, and Fcγ-receptor binding antibodies. Our results support a model in which antibodies with different functions mediate protection at different anatomic sites.
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  • 文章类型: Journal Article
    关节软骨退变可能导致老化过程中的骨关节炎(OA),但其潜在机制仍然未知。这里,我们发现软骨细胞在衰老过程中表现出从糖酵解到氧化磷酸化(OXPHOS)的能量代谢转变。Parkin调节各种细胞代谢过程。通过Parkin消融重新编程的软骨代谢降低了OXPHOS并增加了糖酵解,与衰老相关的OA改善。代谢组学分析表明,月桂酰-L-肉碱(LLC)在衰老的软骨中减少,但在帕金缺乏的软骨中增加。体外,LLC改善了老化软骨细胞的软骨基质合成。在体内,前交叉韧带手术(ACLT)小鼠关节内注射LLC可改善OA进展。这些结果表明,在衰老过程中,Parkin受损的软骨调节了代谢变化,通过补充LLC来靶向这种代谢组学变化是改善OA的有希望的治疗策略。
    Articular cartilage degeneration may lead to osteoarthritis (OA) during the aging process, but its underlying mechanism remains unknown. Here, we found that chondrocytes exhibited an energy metabolism shift from glycolysis to oxidative phosphorylation (OXPHOS) during aging. Parkin regulates various cellular metabolic processes. Reprogrammed cartilage metabolism by Parkin ablation decreased OXPHOS and increased glycolysis, with ameliorated aging-related OA. Metabolomics analysis indicated that lauroyl-L-carnitine (LLC) was decreased in aged cartilage, but increased in Parkin-deficient cartilage. In vitro, LLC improved the cartilage matrix synthesis of aged chondrocytes. In vivo, intra-articular injection of LLC in mice with anterior cruciate ligament transaction (ACLT) ameliorated OA progression. These results suggest that metabolic changes are regulated by Parkin-impaired cartilage during aging, and targeting this metabolomic changes by supplementation with LLC is a promising treatment strategy for ameliorating OA.
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