foodborne pathogen

食源性病原体
  • 文章类型: Journal Article
    单核细胞增生李斯特菌(L.单核细胞增多症)是一种食源性病原体,可引起人类和其他动物的李斯特菌病。具有LPXTG基序的表面蛋白在单核细胞增生李斯特菌的毒力中具有重要作用。Lmo0159是一种这样的蛋白质,但对它在单核细胞增生李斯特菌毒力中的作用知之甚少,运动性,和生物膜的形成。这里,我们构建并表征了lmo0159的缺失突变体(Δlmo0159)。我们不仅分析了生物膜形成的能力,运动性,附件,和不同细胞类型的细胞内生长,还有LD50;小鼠肝脏中的细菌负荷,脾,脾和大脑;毒力基因的表达;以及攻击后小鼠的存活时间。结果表明,通过显微镜检查,Δlmo0159菌株的生物膜交联密度低于WT。生物膜形成和毒力基因的表达在生物膜状态下也降低。随后,Δlmo0159在培养基中的生长和运动增强。相反,单核细胞增生李斯特菌的生长和运动性在细胞和小鼠水平上都被Δlmo0159减弱。在细胞层面,Δlmo0159减少斑块大小;加速划痕愈合;并减弱粘连的效率,入侵,和猪肠道上皮细胞(SIEC)的细胞内增殖,RAW264.7,小鼠脑微血管内皮细胞(mBMEC),和人脑微血管内皮细胞(hCMEC/D3)。毒力基因的表达也受到抑制。在鼠标级别,Δlmo0159菌株的LD50是WT菌株的100.97倍。Δlmo0159菌株在肝脏和脾脏中的细菌负荷低于WT菌株。在腹腔感染的小鼠模型中,lmo0159基因的缺失显著延长了小鼠的存活时间,表明lmo0159缺失突变体也表现出降低的毒力。因此,我们的研究确定lmo0159是单核细胞增生李斯特菌LPXTG蛋白中的一种新型毒力因子。
    Listeria monocytogenes (L. monocytogenes) is a foodborne pathogen that causes listeriosis in humans and other animals. Surface proteins with the LPXTG motif have important roles in the virulence of L. monocytogenes. Lmo0159 is one such protein, but little is known about its role in L. monocytogenes virulence, motility, and biofilm formation. Here, we constructed and characterized a deletion mutant of lmo0159 (∆lmo0159). We analyzed not only the capacity of biofilm formation, motility, attachment, and intracellular growth in different cell types but also LD50; bacterial load in mice\'s liver, spleen, and brain; expression of virulence genes; and survival time of mice after challenge. The results showed that the cross-linking density of the biofilm of ∆lmo0159 strain was lower than that of WT by microscopic examination. The expression of biofilm-formation and virulence genes also decreased in the biofilm state. Subsequently, the growth and motility of ∆lmo0159 in the culture medium were enhanced. Conversely, the growth and motility of L. monocytogenes were attenuated by ∆lmo0159 at both the cellular and mouse levels. At the cellular level, ∆lmo0159 reduced plaque size; accelerated scratch healing; and attenuated the efficiency of adhesion, invasion, and intracellular proliferation in swine intestinal epithelial cells (SIEC), RAW264.7, mouse-brain microvascular endothelial cells (mBMEC), and human-brain microvascular endothelial cells (hCMEC/D3). The expression of virulence genes was also inhibited. At the mouse level, the LD50 of the ∆lmo0159 strain was 100.97 times higher than that of the WT strain. The bacterial load of the ∆lmo0159 strain in the liver and spleen was lower than that of the WT strain. In a mouse model of intraperitoneal infection, the deletion of the lmo0159 gene significantly prolonged the survival time of the mice, suggesting that the lmo0159 deletion mutant also exhibited reduced virulence. Thus, our study identified lmo0159 as a novel virulence factor among L. monocytogenes LPXTG proteins.
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  • 文章类型: Journal Article
    细菌科细菌家族包括从动物和相关食品中分离的物种。此外,这些物种已经在其他生态位被发现,包括水。一些物种,特别是Butzleri杆菌和低温嗜氧杆菌,已从人类临床病例中分离出来,并与胃肠道症状有关。抗生素耐药菌株的存在是公众健康的问题,考虑到可能的人畜共患病和食源性感染是由含有对抗生素治疗有抗性的细菌的污染食物引起的。这篇综述旨在强调糖杆菌属中抗生素耐药性的重要性。从几个来源分离,包括有关该细菌已显示出抗药性的抗生素类别的信息。弓形虫。表现出广泛的抗生素耐药性,包括几个抗生素抗性基因。抗生素抗性基因组性状包括抗生素靶蛋白中的外排泵和突变。文献显示高比例的糖杆菌属。具有多重耐药性。然而,文献中的研究主要集中在对Butzleri和A.cryaerophilus的抗生素耐药性的评估上,因为这些物种经常从各种来源中分离出来。这些方面强调了将重点放在可能从几种来源分离的几种拟杆菌属物种上的研究的必要性。
    The Arcobacteraceae bacterial family includes species isolated from animals and related food products. Moreover, these species have been found in other ecological niches, including water. Some species, particularly Arcobacter butzleri and Arcobacter cryaerophilus, have been isolated from human clinical cases and linked to gastrointestinal symptoms. The presence of antibiotic-resistant strains is a concern for public health, considering the possible zoonoses and foodborne infections caused by contaminated food containing bacteria resistant to antibiotic treatments. This review aims to highlight the importance of antibiotic resistance in Arcobacter spp. isolates from several sources, including information about antibiotic classes to which this bacterium has shown resistance. Arcobacter spp. demonstrated a wide spectrum of antibiotic resistance, including several antibiotic resistance genes. Antibiotic resistance genomic traits include efflux pumps and mutations in antibiotic target proteins. The literature shows a high proportion of Arcobacter spp. that are multidrug-resistant. However, studies in the literature have primarily focused on the evaluation of antibiotic resistance in A. butzleri and A. cryaerophilus, as these species are frequently isolated from various sources. These aspects underline the necessity of studies focused on several Arcobacter species that could potentially be isolated from several sources.
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  • 文章类型: Journal Article
    空肠弯曲杆菌是全球食源性疾病的主要原因。开发针对空肠弯曲杆菌的替代抗菌策略,这项研究设计并优化了具有药用真菌无柄灵芝细胞内成分的金属纳米颗粒(NPs)的绿色合成,以提供所需的还原剂和稳定剂。通过透射电子显微镜和动态光散射对NP进行表征,准球形NP的氧化铜NP的尺寸为2.9±0.9nm,银NP的尺寸为14.7±0.6nm。表面电荷评估显示,氧化铜和银NP的zeta电位为-21.0±6.5mV和-24.4±7.9mV,分别。NPs对空肠弯曲杆菌的生长抑制通过附着到外部细胞膜和随后的细胞内内化而发生,并导致6μg/mL的银NP和10μg/mL的氧化铜NP的最小抑制浓度。另一方面,观察到由银和铜NP引起的不同的ROS产生。总之,这项研究首次证明了使用绿色合成与药用真菌G.无柄产生有效抑制空肠弯曲菌生长的金属NPs,为传统的抗菌药物使用提供可持续和有效的方法。
    Campylobacter jejuni is a major cause of global foodborne illnesses. To develop alternative antimicrobial strategies against C. jejuni, this study designed and optimized the green synthesis of metallic nanoparticles (NPs) with intracellular components of the medicinal fungus Ganoderma sessile to provide the needed reducing and stabilizing agents. NPs were characterized by transmission electron microscopy and dynamic light scattering, and the quasi-spherical NPs had sizes of 2.9 ± 0.9 nm for the copper oxide NPs and 14.7 ± 0.6 nm for the silver NPs. Surface charge assessment revealed zeta potentials of -21.0 ± 6.5 mV and -24.4 ± 7.9 mV for the copper oxide and silver NPs, respectively. The growth inhibition of C. jejuni by the NPs occurred through attachment to the outer cell membrane and subsequent intracellular internalization and resulted in minimum inhibitory concentrations of the silver NPs at 6 µg/mL and copper oxide NPs at 10 µg/mL. On the other hand, a differential ROS production caused by silver and copper NPs was observed. In summary, this research presents the first demonstration of using green synthesis with the medicinal fungus G. sessile to produce metallic NPs that effectively inhibit C. jejuni growth, providing a sustainable and effective approach to the traditional use of antimicrobials.
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  • 文章类型: Journal Article
    产气荚膜梭菌是引起食物中毒和动物肠炎的主要厌氧病原体之一。随着抗生素耐药性的上升和农业中使用抗生素生长促进剂(AGP)的限制,梭菌肠炎和食物沾染已变得更加普遍。用标准培养方法确认检测费时费力,有必要开发现场快速检测工具。在这项研究中,重组酶聚合酶扩增(RPA)和侧流生物传感器(LFB)的组合用于目视检测鸡肉和牛奶中的产气荚膜梭菌。
    针对产气荚膜梭菌的plc基因设计了两组引物,以及引物的扩增效率和特异性。引物的选择产生在其上设计探针的扩增片段。将探针与侧流生物传感器(LFB)组合。优化了RPA-LFB法的反应时间和温度,并对测定的灵敏度进行了评估。选择了几种常见的食源性致病菌,对所建立的方法进行特异性测试。用不同浓度(1×102CFU/mL至1×106CFU/mL)的产气荚膜梭菌人工接种鸡肉和牛奶样品,比较了RPA-LFB法和PCR法的检测效率。RPA-LFB可以在20分钟内完成,并且可以通过LFB测试条直观地读取结果。RPA-LFB具有可接受的特异性和100pg的最低检测限。/μL的核酸样品。能够在1×104CFU/mL和1×103CFU/mL的最低浓度下稳定检测鸡肉和牛奶中的产气荚膜梭菌污染,分别。
    总而言之,RPA-LFB具有特异性和敏感性。这是一个快速的,食品中产气荚膜梭菌的检测方法简单易行,适用于现场检测工作。
    UNASSIGNED: Clostridium perfringens is one of the major anaerobic pathogen causing food poisoning and animal enteritis. With the rise of antibiotic resistance and the restrictions of the use of antibiotic growth promoting agents (AGPs) in farming, Clostridium enteritis and food contamination have become more common. It is time-consuming and labor-intensive to confirm the detection by standard culture methods, and it is necessary to develop on-site rapid detection tools. In this study, a combination of recombinase polymerase amplification (RPA) and lateral flow biosensor (LFB) was used to visually detect C. perfringens in chicken meat and milk.
    UNASSIGNED: Two sets of primers were designed for the plc gene of C. perfringens, and the amplification efficiency and specificity of the primers. Selection of primers produces an amplified fragment on which the probe is designed. The probe was combined with the lateral flow biosensor (LFB). The reaction time and temperature of RPA-LFB assay were optimized, and the sensitivity of the assay was assessed. Several common foodborne pathogens were selected to test the specificity of the established method. Chicken and milk samples were artificially inoculated with different concentrations (1 × 102 CFU/mL to 1 × 106 CFU/mL) of C. perfringens, and the detection efficiency of RPA-LFB method and PCR method was compared. RPA-LFB can be completed in 20 min and the results can be read visually by the LFB test strips. The RPA-LFB has acceptable specificity and the lowest detection limit of 100 pg./μL for nucleic acid samples. It was able to stably detect C. perfringens contamination in chicken and milk at the lowest concentration of 1 × 104 CFU/mL and 1 × 103 CFU/mL, respectively.
    UNASSIGNED: In conclusion, RPA-LFB is specific and sensitive. It is a rapid, simple and easy-to-visualize method for the detection of C. perfringens in food and is suitable for use in field testing work.
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  • 文章类型: Journal Article
    目的:关于基因组数据库在公共卫生中的应用已经写了很多。在食品安全中,这些数据库包含来自两种类型的分离株的数据-来自患者的数据(即,临床)和非临床来源(例如,食品制造环境)。来自这些来源的分离株之间的遗传匹配代表了感兴趣的信号。我们调查了三个大型基因组数据库(单核细胞增生李斯特菌,大肠杆菌,和沙门氏菌)和较小的Cronobacter数据库;这些数据库是NCBI(国家生物技术信息中心)病原体检测项目的一部分。
    结果:目前,单核细胞增生李斯特菌的临床分离株与非临床分离株的匹配率为33%,46%为沙门氏菌,和7%的大肠杆菌。这些匹配率与几个数据库特征相关,包括生物体的多样性,数据库大小,和非临床生物样品的比例。通过逻辑回归建模匹配率显示出相对较好的性能。我们的预测模型说明了用非临床分离株填充数据库以更好地识别临床样品的匹配的重要性。此类信息应有助于公共卫生官员优先考虑监测策略,并显示填充新兴数据库的关键需求(例如,SakazakiiCronobacter).
    OBJECTIVE: Much has been written about the utility of genomic databases to public health. Within food safety these databases contain data from two types of isolates-those from patients (i.e., clinical) and those from non-clinical sources (e.g., a food manufacturing environment). A genetic match between isolates from these sources represents a signal of interest. We investigate the match rate within three large genomic databases (Listeria monocytogenes, Escherichia coli, and Salmonella) and the smaller Cronobacter database; the databases are part of the Pathogen Detection project at NCBI (National Center for Biotechnology Information).
    RESULTS: Currently, the match rate of clinical isolates to non-clinical isolates is 33% for L. monocytogenes, 46% for Salmonella, and 7% for E. coli. These match rates are associated with several database features including the diversity of the organism, the database size, and the proportion of non-clinical BioSamples. Modeling match rate via logistic regression showed relatively good performance. Our prediction model illustrates the importance of populating databases with non-clinical isolates to better identify a match for clinical samples. Such information should help public health officials prioritize surveillance strategies and show the critical need to populate fledgling databases (e.g., Cronobacter sakazakii).
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  • 文章类型: Journal Article
    基于表型的食源性致病菌的拉曼光谱快速鉴定受到越来越多的关注,通过基因型测定的拉曼指纹数据库的可靠性至关重要。在研究中,基于t分布随机近邻嵌入(t-SNE)和支持向量机(SVM)建立4种食源性致病菌分类模型,识别准确率为97.04%。通过拉曼激活细胞喷射(RACE)将模型命名的目标细菌喷射,然后扩增单细胞基因组DNA用于物种分析。靶细胞的预测表型和实际基因型之间的正确匹配的准确度为至少83.3%。此外,通过该模型预测了与物种一致的所有预期测序结果.总之,基于拉曼光谱与机器学习相结合的拉曼指纹数据库在食源性致病菌快速检测领域具有良好的应用前景。
    Raman spectroscopy for rapid identification of foodborne pathogens based on phenotype has attracted increasing attention, and the reliability of the Raman fingerprint database through genotypic determination is crucial. In the research, the classification model of four foodborne pathogens was established based on t-distributed stochastic neighbor embedding (t-SNE) and support vector machine (SVM); the recognition accuracy was 97.04%. The target bacteria named by the model were ejected through Raman-activated cell ejection (RACE), and then single-cell genomic DNA was amplified for species analysis. The accuracy of correct matches between the predicted phenotype and the actual genotype of the target cells was at least 83.3%. Furthermore, all anticipant sequencing results brought into correspondence with the species were predicted through the model. In sum, the Raman fingerprint database based on Raman spectroscopy combined with machine learning was reliable and promising in the field of rapid detection of foodborne pathogens.
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  • 文章类型: Journal Article
    鳄梨及其产品的消费与肠道沙门氏菌和单核细胞增生李斯特菌引起的疾病爆发有关。这些病原体是从农场和市场收集的鳄梨中分离出来的。与鳄梨果皮接触后,沙门氏菌和单核细胞增生李斯特菌的细胞可以通过悬浮在水膜中和静电力的吸引而变得松散附着(LA),或通过物理和不可逆的附着机制强烈附着(SA)。附着的细胞可能对用于净化水果的试剂具有更大的抗性。根据暴露时间的函数,评估了将湿蒸汽(WS)应用于Hass鳄梨的表皮对沙门氏菌和单核细胞增生李斯特菌的LA和SA计数减少的影响。将接种的鳄梨洗涤并在处理室内暴露于WS30、45和60s。发现沙门氏菌比单核细胞增生李斯特菌更容易感染WS。蒸汽在减少LA和SA细胞数量方面的功效对于两种病原体是相似的。蒸牛油果60秒减少了4.6和4.8logCFU/牛油果,而SA细胞减少了5.2和4.4logCFU/鳄梨,分别。•将鳄梨蒸60秒可最大程度地减少两种病原体的松散和强烈附着的细胞。•湿蒸汽处理有效地消除了两种病原体的松散和强烈附着的细胞。•单核细胞增生李斯特菌附着的细胞显示出比沙门氏菌对蒸汽处理更大的抗性。
    The consumption of avocados and their products has been linked to outbreaks of illness caused by Salmonella enterica and Listeria monocytogenes. These pathogens have been isolated from avocados collected from farms and markets. After contact with the avocado epicarp, the cells of Salmonella and L. monocytogenes can become loosely attached (LA) by suspension in a film of water and attraction by electrostatic forces, or strongly attached (SA) by physical and irreversible attachment mechanisms. Attached cells may have greater resistance to agents used to decontaminate the fruit. The effect of applying wet steam (WS) to the epicarp of Hass avocados on the reduction LA and SA counts of Salmonella and L. monocytogenes was evaluated as a function of the exposure time. The inoculated avocados were washed and exposed to WS for 30, 45, and 60 s inside a treatment chamber. Salmonella was found to be more susceptible to WS than L. monocytogenes. The efficacy of steam in reducing LA and SA cell numbers was similar for both pathogens. Steaming avocados for 60 s reduced LA Salmonella and L. monocytogenes cells by 4.6 and 4.8 log CFU/avocado, whereas SA cells were decreased by 5.2 and 4.4 log CFU/avocado, respectively.•Steaming the avocados for 60 s produced the greatest reduction in loosely and strongly attached cells for both pathogens.•Wet steam treatment efficiently eliminated the loosely and strongly attached cells of both pathogens.•The Listeria monocytogenes attached cells showed greater resistance to steam treatment than Salmonella.
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  • 文章类型: Journal Article
    作为最常见的食源性疾病,随着2020年COVID-19大流行的开始,德国的弯曲杆菌数量减少。由于食用新鲜鸡肉是人类感染的主要危险因素,这项研究调查了下萨克森州鸡car体弯曲杆菌污染水平与人类病例之间的关系,德国观察了2018年至2021年的新鲜鸡肉消费模式,包括COVID-19大流行的时间。根据中位数和每周使用列联表进行描述性分析,对肉鸡和人类病例中的弯曲杆菌水平进行分类。在COVID-19大流行之前(2018年和2019年),颈部样本和许多人类病例的弯曲杆菌污染水平较高,而随着COVID-19大流行(2020年和2021年)的开始,鸡尸体的污染水平较低,人类病例很少。这两个参数之间的最低一致性显示在2018年(科恩的卡帕系数:0.37)和2020年(0.38)。2021年检查的一致性最高(0.69)。随着2020年COVID-19大流行的开始,下萨克森州的私人新鲜鸡肉消费量大幅增加,与2019年相比增加了63.9吨,平均每周为453.5吨。在COVID-19大流行期间,公共卫生措施和医疗治疗数量的减少无疑对报告较少的人类病例产生了影响。然而,2023年,德国的人类病例数保持在较低水平,而鸡肉消费量增加。因此,关于因食用鸡肉而导致的弯曲性蝶病风险的进一步风险评估应包括原产国,由于欧洲国家对鸡尸体的污染程度不同。
    As the most common foodborne disease, number of campylobacteriosis decreased in Germany with the beginning of the COVID-19 pandemic in 2020. As the consumption of fresh chicken meat is a major risk factor for human infection, this study investigated the relationship between Campylobacter contamination levels on chicken carcasses and human cases in Lower Saxony, Germany and observed fresh chicken meat consumption patterns between 2018 and 2021 including the time of the COVID-19 pandemic. Campylobacter levels in broilers and human cases were classified based on the median and descriptively analysed per week using contingency tables. Before the COVID-19 pandemic (2018 and 2019), high Campylobacter contamination levels on neck samples and many human cases were more present, whereas with the beginning of the COVID-19 pandemic (2020 and 2021), low contamination levels on chicken carcasses and few human cases were more present. Lowest concordance between both parameters was shown in 2018 (Cohen\'s cappa coefficient: 0.37) and 2020 (0.38). The highest concordance was examined in 2021 (0.69). The private consumption of fresh chicken meat in Lower Saxony increased significantly with the beginning of the COVID-19 pandemic in 2020 by 63.9 tonnes compared to 2019 to an average of 453.5 tonnes per week. Public health measures and a reduced number of medical treatments have undoubtedly had an impact on less reported human cases during the COVID-19 pandemic. However, number of human cases remained at a low level in Germany in 2023 while chicken meat consumption increased. Thus, further risk assessments regarding the risk of campyloabcteriosis due to chicken meat consumption should include the country of origin, as the level of contamination of chicken carcasses varies between European countries.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    2015年新加坡意外的食源性疫情加剧了B组链球菌(GBS,无乳链球菌)序列283型是一种通过食用受污染的生淡水鱼传播的新兴食源性病原体。利用常规微生物和全基因组测序方法的基于分离的工作流程通常用于支持对这种新兴食源性病原体的控制管理至关重要的生物监督工作。然而,这些基于隔离的工作流程往往具有相对较长的周转时间,这阻碍了对实施风险缓解的及时响应。为了解决这个差距,我们已经开发了一种基于宏基因组学的工作流程,用于同时检测和基因组鉴定生淡水鱼中的GBS.值得注意的是,我们的验证结果表明,这种基于宏基因组学的工作流程可以实现相当的准确度和可能更好的检测限,同时相对于基于隔离的工作流程将周转时间减半(从2周到5天).基于宏基因组学的工作流程也成功地适用于便携式长读纳米孔测序仪,证明其对实时需求点测试的潜在适用性。以淡水鱼中的GBS为例,这项工作代表了一项概念验证研究,支持宏基因组学作为一种快速准确的检测方法在复杂食品基质中检测和基因组鉴定食源性病原体的可行性和有效性。
    目的:为了及时有效地应对食源性暴发,显然需要一种快速准确的食品微生物检测方法。这与新兴的食源性病原体特别相关,例如B族链球菌(GBS),其相关的食品安全风险可能未得到充分表征。以生淡水鱼中的GBS为例,本研究描述了基于宏基因组学的食品微生物安全快速检测和监测工作流程的开发.这项研究可以作为其他复杂食品基质中各种食源性病原体的工作模型,为宏基因组学在食品微生物安全检测中的方法学发展铺平了道路。
    The unexpected foodborne outbreak in Singapore in 2015 has accentuated Group B Streptococcus (GBS, Streptococcus agalactiae) sequence type 283 as an emerging foodborne pathogen transmitted via the consumption of contaminated raw freshwater fish. Isolation-based workflows utilizing conventional microbiological and whole-genome sequencing methods are commonly used to support biosurveillance efforts critical for the control management of this emerging foodborne pathogen. However, these isolation-based workflows tend to have relatively long turnaround times that hamper a timely response for implementing risk mitigation. To address this gap, we have developed a metagenomics-based workflow for the simultaneous detection and genomic characterization of GBS in raw freshwater fish. Notably, our validation results showed that this metagenomics-based workflow could achieve comparable accuracy and potentially better detection limits while halving the turnaround time (from 2 weeks to 5 days) relative to an isolation-based workflow. The metagenomics-based workflow was also successfully adapted for use on a portable long-read nanopore sequencer, demonstrating its potential applicability for real-time point-of-need testing. Using GBS in freshwater fish as an example, this work represents a proof-of-concept study that supports the feasibility and validity of metagenomics as a rapid and accurate test methodology for the detection and genomic characterization of foodborne pathogens in complex food matrices.
    OBJECTIVE: The need for a rapid and accurate food microbiological testing method is apparent for a timely and effective foodborne outbreak response. This is particularly relevant for emerging foodborne pathogens such as Group B Streptococcus (GBS) whose associated food safety risk might be undercharacterized. By using GBS in raw freshwater fish as a case example, this study describes the development of a metagenomics-based workflow for rapid food microbiological safety testing and surveillance. This study can inform as a working model for various foodborne pathogens in other complex food matrices, paving the way for future methodological development of metagenomics for food microbiological safety testing.
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