entanglements

纠缠
  • 文章类型: Journal Article
    当前的聚合物流动范式假设(i)大分子分子量的影响,M,和温度,T,关于聚合物熔体粘度的表达式;(ii)缠结的分子量,Mc,与T无关;(iii)通过对数粘度曲线相对于对数M的断裂来确定Mc明确地将未缠结的熔体与缠结的熔体区分开。我们使用从极低分子量(M/Mc=0.015)到相对较高分子量(M/Mc=34)的单分散聚苯乙烯样品的可靠流变学数据来测试M和T在粘度表达式中的分离;我们揭示了T和M分离有效性的总体错觉在数学上是可理解的,特别是在高温下,对于M>2Mc,但是,严格来说,M和T的分离无效,除了M的某些周期值等于Mc,2Mc,4Mc,8Mc,16Mc,等。(周期加倍)围绕“极点参考”值MR=4Mc组织。我们还透露,对于MTg:TgTLL,其中TLL是液-液温度。我们的结论是,聚合物熔体粘度的经典配方过于简化,以至于缺少重要的实验事实。例如T和M分离的周期加倍,TLL,M\'c,Mc,导致它无法理解纠缠的真正本质。我们在本文的讨论中提出了粘弹性行为的替代方法,二元一致性的“二元性和交叉二元性”,显示了该模型形式主义如何用于数学测试并使经典粘度公式中T和M的分离无效。
    The current paradigm of polymer flow assumes that (i) the effect of the molecular weight of the macromolecules, M, and of the temperature, T, on the expression of the viscosity of polymer melts separate; (ii) the molecular weight for entanglement, Mc, is independent of T; and (iii) the determination of Mc by the break in the log viscosity curve against log M unequivocally differentiates un-entangled melts from entangled melts. We use reliable rheological data on monodispersed polystyrene samples from very low molecular weight (M/Mc = 0.015) to relatively high molecular weight (M/Mc = 34) to test the separation of M and T in the expression of the viscosity; we reveal that an overall illusion of the validity of the separation of T and M is mathematically comprehensible, especially at high temperature and for M > 2Mc, but that, strictly speaking, the separation of M and T is not valid, except for certain periodic values of M equal to Mc, 2Mc, 4Mc, 8Mc, 16Mc, etc. (period doubling) organized around a \"pole reference\" value MR = 4Mc. We also reveal, for M < Mc, the existence of a lower molecular weight limit, M\'c = Mc/8 for the onset of the macromolecular behavior (macro-coil). The discrete and periodic values of M that validate the separation of the effect of M and T on the viscosity generate the fragmentation of the molecular range into three rheological ranges. Likewise, we show that the effect of temperature is also fragmented into three rheological ranges for T > Tg: Tg < T< (Tg + 23°), (Tg + 23°) < T < TLL and T > TLL\' where TLL is the liquid-liquid temperature. Our conclusion is that the classical formulation of the viscosity of polymer melts is so overly simplified that it is missing important experimental facts, such as period doubling for the separation of T and M, TLL, M\'c, and Mc, resulting in its inability to understand the true nature of entanglements. We present in the discussion of the paper the alternative approach to the viscoelastic behavior, \"the duality and cross-duality\" of the Dual-conformers, showing how this model formalism was used to test mathematically and invalidate the separation of T and M in the classical formulation of viscosity.
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  • 文章类型: Journal Article
    柔性大分子容易与邻近的大分子缠结。由此产生的网络决定了许多聚合物的性质,包括流变和机械性能。因此,进行了许多实验和建模研究,以描述大分子的缠结程度与聚合物性能之间的关系。引言提供了有关大分子链缠结的一般信息,在研究平衡缠结聚合物的基础上收集。还显示了如何降低缠结的密度。第二章介绍了导致描述单个大分子运动的实验和模型。本文的下一部分讨论了聚合物部分解缠结后的流变性能如何变化。给出了链缠结程度对机械性能影响的结果。
    Flexible macromolecules easily become entangled with neighboring macromolecules. The resulting network determines many polymer properties, including rheological and mechanical properties. Therefore, a number of experimental and modeling studies were performed to describe the relationship between the degree of entanglement of macromolecules and polymer properties. The introduction presents general information about the entanglements of macromolecule chains, collected on the basis of studies of equilibrium entangled polymers. It is also shown how the density of entanglements can be reduced. The second chapter presents experiments and models leading to the description of the movement of a single macromolecule. The next part of the text discusses how the rheological properties change after partial disentangling of the polymer. The results on the influence of the degree of chain entanglement on mechanical properties are presented.
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  • 文章类型: Journal Article
    研究了降低大分子缠结密度对β型聚丙烯结晶的影响。从二甲苯溶液中获得缠结少七倍的聚丙烯,并将其性能与完全缠结聚丙烯进行了比较。为了获得高的β相含量,使用庚二酸钙使聚合物成核。在非等温结晶研究中,发现β晶体的加速生长,提高结晶温度。此外,等温结晶在成核过程中最快,部分解开聚丙烯。在更多可移动的大分子存在下,球晶的生长速率增加和成核活性增强是导致解缠结聚丙烯中熔体转化为晶体的高速率的原因。还观察到,在解开大分子后,β-晶体的平衡熔融温度较低。根据方案II,减少缠结后更好的晶体形成条件导致结晶增强。
    The influence of decreasing the entanglement density of macromolecules on the crystallization of the β-form of polypropylene was investigated. Polypropylene with seven times less entanglement was obtained from a solution in xylene, and its properties were compared with those of fully entangled polypropylene. To obtain a high β-phase content, the polymer was nucleated using calcium pimelate. In non-isothermal crystallization studies, accelerated growth of β-crystals was found, increasing the crystallization temperature. Also, the isothermal crystallization was fastest in the nucleated, partially disentangled polypropylene. Increased growth rate of spherulites and enhanced nucleation activity in the presence of more mobile macromolecules were responsible for the high rate of melt conversion to crystals in the disentangled polypropylene. It was also observed that the equilibrium melting temperature of β-crystals is lower after disentangling macromolecules. Better conditions for crystal building after reduction of entanglements resulted in enhanced crystallization according to regime II.
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  • 文章类型: Journal Article
    理解和表征具有结晶和无定形片段的半结晶模型对于工业应用至关重要。粗粒分子动力学(CGMD)模拟研究了熔体在高密度聚乙烯(HDPE)中形成的晶体网络,并对拉伸性能进行微观结构分析。修改后的Paul-Yoon-Smith(PYS/R)力场参数用于计算PE链之间的原子间力。在300K和1atm下的等温结晶预测了多核晶体生长;此外,层状晶体茎和无定形区域交替取向。沿替代层状茎的一维密度分布进一步证实了层状堆叠取向的有序。使用这种塑料模型的制备方法,大约的半结晶模型密度(ρcr)。0.913g·cm-3和约的无定形模型密度(ρam)。得到0.856g·cm-3。此外,ρcr/ρam≈1.06的比值与计算(≈1.096)和实验(≈1.14)数据非常吻合,确保模拟的可靠性。模型的结晶度(χc)约为。在300K时为52%。尽管如此,结晶度在指定时间内逐渐增加,表明结晶过程中层状茎的排列。沿z轴方向模拟拉伸试验的特征应力-应变曲线表现出可逆的尖锐弹性状态,屈服抗拉强度约为。100MPa,和350%的不可逆断裂拉伸强度。空化机制包括层状茎沿变形轴的排列。该研究强调了使用PYS/R力场的PE模型的晶体网络形成的解释性模型,它产生了具有有序层状和无定形段的微观结构,具有强大的机械性能,这有助于预测塑料在外加力作用下的微观结构-力学性能关系。
    Understanding and characterizing semi-crystalline models with crystalline and amorphous segments is crucial for industrial applications. A coarse-grained molecular dynamics (CGMD) simulations study probed the crystal network formation in high-density polyethylene (HDPE) from melt, and shed light on tensile properties for microstructure analysis. Modified Paul-Yoon-Smith (PYS/R) forcefield parameters are used to compute the interatomic forces among the PE chains. The isothermal crystallization at 300 K and 1 atm predicts the multi-nucleus crystal growth; moreover, the lamellar crystal stems and amorphous region are alternatively oriented. A one-dimensional density distribution along the alternative lamellar stems further confirms the ordering of the lamellar-stack orientation. Using this plastic model preparation approach, the semi-crystalline model density (ρcr) of ca. 0.913 g·cm-3 and amorphous model density (ρam) of ca. 0.856 g·cm-3 are obtained. Furthermore, the ratio of ρcr/ρam ≈ 1.06 is in good agreement with computational (≈1.096) and experimental (≈1.14) data, ensuring the reliability of the simulations. The degree of crystallinity (χc) of the model is ca. 52% at 300 K. Nevertheless, there is a gradual increase in crystallinity over the specified time, indicating the alignment of the lamellar stems during crystallization. The characteristic stress-strain curve mimicking tensile tests along the z-axis orientation exhibits a reversible sharp elastic regime, tensile strength at yield ca. 100 MPa, and a non-reversible tensile strength at break of 350%. The cavitation mechanism embraces the alignment of lamellar stems along the deformation axis. The study highlights an explanatory model of crystal network formation for the PE model using a PYS/R forcefield, and it produces a microstructure with ordered lamellar and amorphous segments with robust mechanical properties, which aids in predicting the microstructure-mechanical property relationships in plastics under applied forces.
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  • 文章类型: Journal Article
    这篇文章麻烦触摸,要求体现接近,通过对加冕期间虚拟触摸的情感描述。对不同的学术感兴趣,我们从不同的地方成立了一个在线Barad阅读写作小组。验尸官的空虚不是真空,而是充满亲密关系的可能性,教育学,学习,创造力,和冒险。虽然身体分离,我们每天都通过Zoom见面,我们被彼此和我们阅读的文本感动和感动。写作片段和集体艺术品的蒙太奇,基于Massive_Micro项目,突出显示虚拟触摸。Undone,redone,并重新配置,我们变成了衍射人类/非人类的多重性。
    This article troubles touch as requiring embodied proximity, through an affective account of virtual touch during coronatime. Interested in doing academia differently, we started an online Barad readingwriting group from different locations. The coronatime void was not a vacuum, but a plenitude of possibilities for intimacy, pedagogy, learning, creativity, and adventure. Although physically apart, we met daily through Zoom, and we touched and were touched by each other and the texts we read. A montage of writing fragments and a collective artwork, based on the Massive_Micro project, highlight virtual touching. Undone, redone, and reconfigured, we became a diffractive human/nonhuman multiplicity.
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  • 文章类型: Journal Article
    CATH数据库中三分之一的蛋白质结构域包含最近发现的三级拓扑基序:非共价套索缠结,其中蛋白质骨架的片段形成通过残基之间的非共价相互作用封闭的环,并且通过N-或C-末端骨架片段穿过一次或多次。未知的是这种结构基序在生物体的蛋白质组中出现的频率。这些基序与各种类型的蛋白质功能和生物过程的相关性尚未量化。这里,使用蛋白质晶体结构的组合,AlphaFold2预测,和基因本体论术语,我们表明在大肠杆菌中,酿酒酵母和智人占71%,52%和49%的球状蛋白质在其天然折叠中含有一个或多个非共价套索缠结,并且其中一些线程事件非常复杂。Further,含有这些三级基序的蛋白质在这些生物体的某些功能和生物过程中始终富集,而在其他生物体中却被耗尽,强烈表明进化选择压力对这些基序的分布有积极和消极的影响。一起,这些结果表明,非共价套索缠结是广泛的,并表明它们可能被广泛用于蛋白质功能和亚细胞过程,从而影响表型。
    One-third of protein domains in the CATH database contain a recently discovered tertiary topological motif: non-covalent lasso entanglements, in which a segment of the protein backbone forms a loop closed by non-covalent interactions between residues and is threaded one or more times by the N- or C-terminal backbone segment. Unknown is how frequently this structural motif appears across the proteomes of organisms. And the correlation of these motifs with various classes of protein function and biological processes have not been quantified. Here, using a combination of protein crystal structures, AlphaFold2 predictions, and Gene Ontology terms we show that in E. coli, S. cerevisiae and H. sapiens that 71%, 52% and 49% of globular proteins contain one-or-more non-covalent lasso entanglements in their native fold, and that some of these are highly complex with multiple threading events. Further, proteins containing these tertiary motifs are consistently enriched in certain functions and biological processes across these organisms and depleted in others, strongly indicating an influence of evolutionary selection pressures acting positively and negatively on the distribution of these motifs. Together, these results demonstrate that non-covalent lasso entanglements are widespread and indicate they may be extensively utilized for protein function and subcellular processes, thus impacting phenotype.
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  • 文章类型: Journal Article
    机械回收是减少塑料污染的最有效方法,因为它能够保持塑料的固有特性,并提供其他类型回收的经济效益。另一方面,分子动力学(MD)模拟提供了对结构变形的关键见解,层状结晶轴(c轴)取向,和重组,这对于理解结构变形过程中的塑性行为至关重要。为了模拟机械回收过程中高密度聚乙烯(HDPE)结构变形的影响,同时注意获得交替的层状取向,作者研究了一种制备堆叠的层状取向HDPE联合原子(UA)模型的特定方法,从晶体构象的单个1000UA(C1000)链开始,然后将这些链构象包装成2链,10链,15链,和20链半结晶模型。2链,10链,和15链模型产生的HDPE微结构具有所需的交替层状取向和缠结的无定形片段。另一方面,20链模型显示多核晶体生长,而不是层状堆叠取向。使用一维密度分布和局部有序参数{P2(r)}分析的结构表征证明了层状堆叠取向的形成。所有半结晶模型显示的总密度(ρ)和结晶度(χ)范围为0.90-0.94g/cm-3和≥42-45%,分别。在沿层状堆叠取向的单轴应变变形下,观察到显着的应力屈服(σ_屈服)≈100-120MPa和优异的断裂伸长率(ε_断裂)〜250%。同样,在MD模拟期间,微观结构相变表示每个链的平均缠结数()。从目前的研究来看,可以推荐的是,10链交替层状堆叠取向模型是HDPE最可靠的微型模型,可以在各种条件下模仿工业相关的塑料行为。
    Mechanical recycling is the most efficient way to reduce plastic pollution due to its ability to maintain the intrinsic properties of plastics as well as provide economic benefits involved in other types of recycling. On the other hand, molecular dynamics (MD) simulations provide key insights into structural deformation, lamellar crystalline axis (c-axis) orientations, and reorganization, which are essential for understanding plastic behavior during structural deformations. To simulate the influence of structural deformations in high-density polyethylene (HDPE) during mechanical recycling while paying attention to obtaining an alternate lamellar orientation, the authors examine a specific way of preparing stacked lamella-oriented HDPE united atom (UA) models, starting from a single 1000 UA (C1000) chain of crystalline conformations and then packing such chain conformations into 2-chain, 10-chain, 15-chain, and 20-chain semi-crystalline models. The 2-chain, 10-chain, and 15-chain models yielded HDPE microstructures with the desired alternating lamellar orientations and entangled amorphous segments. On the other hand, the 20-chain model displayed multi-nucleus crystal growth instead of the lamellar-stack orientation. Structural characterization using a one-dimensional density profile and local order parameter {P2(r)} analyses demonstrated lamellar-stack orientation formation. All semi-crystalline models displayed the total density (ρ) and degree of crystallinity (χ) range of 0.90-0.94 g/cm-3 and ≥42-45%, respectively. A notable stress yield (σ_yield) ≈ 100-120 MPa and a superior elongation at break (ε_break) ~250% was observed under uniaxial strain deformation along the lamellar-stack orientation. Similarly, during the MD simulations, the microstructure phase change represented the average number of entanglements per chain (). From the present study, it can be recommended that the 10-chain alternate lamellar-stack orientation model is the most reliable miniature model for HDPE that can mimic industrially relevant plastic behavior in various conditions.
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  • 文章类型: Journal Article
    Staudinger告诉我们,大分子是由共价键合的单体重复单元组成的,这些单元链接为聚合物链。这种范式在本文中没有受到挑战。聚合物物理学中提出的主要问题仍然是:当它们是粘性液体时,当它们在高温下经受剪切变形时,这些长链如何相互作用和作为一个群体移动?目前的共识是我们需要区分两种情况:分子量大分子的“未缠结链”的变形,M,比我小,“纠缠分子量”,以及M>Me的“纠缠”链的变形。目前的范式规定,聚合物的性质来源于大分子本身的统计特征,定义聚合物热力学状态的指定统计系统。当前的范式声称,Rouse模型很好地描述了未缠结熔体的粘弹性,并且当M>Me时提出了缠结问题,由deGennes和他的同事们介绍的复制模型很好地理解了这一点。这两种模型都可以归类为“链动态统计”类别。在本文中,我们详细研究了当前聚合物流变学范式面临的失败和当前挑战:未缠结熔体的Rouse模型,纠缠熔体的复制模型,时间-温度叠加原理,应变引起的粘度的时间依赖性,剪切细化和持续取向。本文记录了当前范式的基本失败及其固有的无法完全描述实验现实。在本文的讨论和结论部分,我们建议需要一种不同的解决方案来解释聚合物链及其“缠结”的粘弹性。这需要改变范式来描述链内部和链之间的相互作用的动态。简要介绍了我们目前提出的开放耗散统计方法,“粮田统计”,是presented。
    Staudinger taught us that macromolecules were made up of covalently bonded monomer repeat units chaining up as polymer chains. This paradigm is not challenged in this paper. The main question raised in polymer physics remains: how do these long chains interact and move as a group when submitted to shear deformation at high temperature when they are viscous liquids? The current consensus is that we need to distinguish two cases: the deformation of \"un-entangled chains\" for macromolecules with molecular weight, M, smaller than Me, \"the entanglement molecular weight\", and the deformation of \"entangled\" chains for M > Me. The current paradigm stipulates that the properties of polymers derive from the statistical characteristics of the macromolecule itself, the designated statistical system that defines the thermodynamic state of the polymer. The current paradigm claims that the viscoelasticity of un-entangled melts is well described by the Rouse model and that the entanglement issues raised when M > Me, are well understood by the reptation model introduced by de Gennes and colleagues. Both models can be classified in the category of \"chain dynamics statistics\". In this paper, we examine in detail the failures and the current challenges facing the current paradigm of polymer rheology: the Rouse model for un-entangled melts, the reptation model for entangled melts, the time-temperature superposition principle, the strain-induced time dependence of viscosity, shear-refinement and sustained-orientation. The basic failure of the current paradigm and its inherent inability to fully describe the experimental reality is documented in this paper. In the discussion and conclusion sections of the paper, we suggest that a different solution to explain the viscoelasticity of polymer chains and of their \"entanglement\" is needed. This requires a change in paradigm to describe the dynamics of the interactions within the chains and across the chains. A brief description of our currently proposed open dissipative statistical approach, \"the Grain-Field Statistics\", is presented.
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  • 文章类型: Journal Article
    背景:从核自旋的角度来看,水以对位和邻位核自旋异构体(同位素)的形式存在。禁止在分离的水分子中进行自旋相互转化,但是最近的许多报告表明它们是大量发生的,通过大量水分子互连网络之间发生的动态质子交换。在这一贡献中,提供了在较早报道的实验中观察到的冰中邻位水的意外缓慢或延迟的相互转化的可能解释。利用量子力学研究的结果,我们已经讨论了Bjerrum缺陷在动态质子交换和正对位自旋态相互转换中的作用。我们猜在Bjerrum缺陷的地点,有量子纠缠状态的可能性,通过成对互动。基于通过副本过渡状态发生的完全相关的交换,我们推测它可以对水的邻位相互转化产生重大影响。我们还推测,整体的邻位-对位相互转换不是一个连续的过程,可以想象是偶然发生的,但在量子力学规则的边界内。
    方法:用高斯09程序进行所有计算。B3LYP/6-31++G(d,p)方法用于计算所有固定点。使用CCSD(T)/aug-cc-pVTZ方法计算进一步的能量校正。对过渡态进行了本征反应坐标(IRC)路径计算。
    BACKGROUND: From a nuclear spin prospective, water exists as para and ortho nuclear spin isomers (isotopomers). Spin interconversions in isolated molecules of water are forbidden, but many recent reports have shown them to happen in bulk, through dynamic proton exchanges happening between interconnected networks of a large array of water molecules. In this contribution, a possible explanation for an unexpected slow or delayed interconversion of ortho-para water in ice observed in an earlier reported experiment is provided. Using the results of quantum mechanical investigations, we have discussed the roles played by Bjerrum defects in the dynamic proton exchanges and ortho-para spin state interconversions. We guess that at the sites of the Bjerrum defects, there are possibilities of quantum entanglements of states, through pairwise interactions. Based on the perfectly correlated exchange happening via a replica transition state, we speculate that it can have significant influences on ortho-para interconversions of water. We also conjecture that the overall ortho-para interconversion is not a continuous process, rather can be imagined to be happening serendipitously, but within the boundary of the rules of quantum mechanics.
    METHODS: All computations were performed with Gaussian 09 program. B3LYP/6-31++G(d,p) methodology was used to compute all the stationary points. Further energy corrections were computed using CCSD(T)/aug-cc-pVTZ methodology. Intrinsic reaction coordinate (IRC) path computations were carried out for the transition states.
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  • 文章类型: Journal Article
    聚合物从缠结的熔体中结晶通常导致形成具有纳米形态的半结晶材料,所述纳米形态由交替的结晶层和无定形层的堆叠组成。控制晶体层厚度的因素已得到很好的研究;然而,对非晶层的厚度没有定量的了解。通过使用一系列高分子量聚合物与未缠结的低聚物的模型共混物,我们阐明了缠结对半结晶形态的影响,从而导致熔体中的缠结密度降低,如流变学测量所表征。等温结晶后的小角度X射线散射实验表明,非晶层的厚度减小,而晶体厚度基本上不受影响。我们介绍一个简单的,然而,没有可调参数的定量模型,据此,所测量的非晶层的厚度以使得缠结浓度达到特定的最大值的方式调整自身。此外,我们的模型提出了一个解释,如果缠结在结晶过程中不能溶解,聚合物结晶通常需要大的过冷。
    Crystallization of polymers from entangled melts generally leads to the formation of semicrystalline materials with a nanoscopic morphology consisting of stacks of alternating crystalline and amorphous layers. The factors controlling the thickness of the crystalline layers are well studied; however, there is no quantitative understanding of the thickness of the amorphous layers. We elucidate the effect of entanglements on the semicrystalline morphology by the use of a series of model blends of high-molecular-weight polymers with unentangled oligomers leading to a reduced entanglement density in the melt as characterized by rheological measurements. Small-angle X-ray scattering experiments after isothermal crystallization reveal a reduced thickness of the amorphous layers, while the crystal thickness remains largely unaffected. We introduce a simple, yet quantitative model without adjustable parameters, according to which the measured thickness of the amorphous layers adjusts itself in such a way that the entanglement concentration reaches a specific maximum value. Furthermore, our model suggests an explanation for the large supercooling that is typically required for crystallization of polymers if entanglements cannot be dissolved during crystallization.
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