biodegradation mechanism

生物降解机理
  • 文章类型: Journal Article
    镁基和锌基生物可降解材料有可能成为治疗骨病的下一代植入材料,因为它们所需的降解和机械性能。本文综述了这些植入材料的研究现状。生物可降解材料所需的性能,如生物降解性,机械性能,简要讨论了性能评价的生物相容性。制造技术的影响,微观结构,合金元素,研究了Mg和Zn基材料性能的后处理技术。通过溶解降解机理,氧化,并讨论了与人体细胞的相互作用。分析了镁锌基生物可降解材料的生物相容性。强调了体外和体内生物相容性测试的重要性,强调体内结果优于细胞系研究。本文确定了许多Mg和Zn基生物可降解材料,并总结了主要发现。
    Mg-based and Zn-based biodegradable materials have the potential to become the next-generation implant materials to treat bone diseases, because of their desired degradation and mechanical properties. This article reviews the status of these implant materials. The required properties of biodegradable materials such as biodegradability, mechanical properties, and biocompatibility for performance evaluation were briefly discussed. The influence of fabrication techniques, microstructure, alloying elements, and post-processing techniques on the properties of Mg and Zn-based materials was addressed. The degradation mechanism by dissolution, oxidation, and interaction with human body cells was discussed. The biocompatibility of Mg and Zn-based biodegradable materials was analyzed. The significance of in vitro and in vivo biocompatibility testing was highlighted, emphasizing the superiority of in vivo results over cell line studies. This article identifies the many Mg and Zn-based biodegradable materials and summarizes the key findings.
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  • 文章类型: Journal Article
    通过降低分子量和改变化学结构,研究了聚苯乙烯(PS)在膨胀PS(EPS)上饲养的粉虫中的降解机理。在饲喂粉虫1周后,观察到消化的PS的分子量降低了33%。消化的PS的FT-IR和py-GC/MS光谱显示,在粉虫体内发生了自由基氧化反应。氢过氧化物的存在,确认了醇和苯酚基团,并获得了带有醌和苯酚基团的苯乙烯的二聚体片段。分子量的降低和苯环的交替表明,在粉虫体内同时发生了通过酚类中间体的自氧化和喹化。EPS饲养的粉虫存活率高于饥饿虫,表明EPS是营养来源。然而,在仅饲喂EPS的粉虫中没有观察到体重增加。与麸皮或聚氨酯泡沫(PU)混合饮食的比较表明,蛋白质,EPS中不存在的磷和镁成分是粉虫生长所必需的。
    A degradation mechanism of polystyrene (PS) in mealworms reared on expanded PS (EPS) was investigated by its decrease in molecular weight and change in chemical structure. A 33% decrease in molecular weight was observed for the digested PS in the frass after 1 week of feeding to mealworms. The FT-IR and py-GC/MS spectra of the digested PS showed radical oxidative reactions taking place in the mealworm body. The presence of hydroperoxide, alcohol and phenol groups was confirmed, and dimer fragments of styrene with quinone and phenol groups were obtained. The decrease in molecular weight and the alternation of benzene rings indicated that autoxidation and quinonization via phenolic intermediates occurred simultaneously in the mealworm body. The survival rate of mealworms reared on EPS was higher than that of starved worms, indicating that EPS was a nutrient source. However, no weight gain was observed in mealworms fed EPS alone. Comparison with the mixed diets with bran or urethane foams (PU) indicated that protein, phosphorus and magnesium components absent from EPS were required for mealworm growth.
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  • 文章类型: Journal Article
    南海一号1号沉船是南宋时期的古代木船。目前,船体木材存在微生物疾病的严峻挑战。本研究旨在于2021年12月从船体中获取微生物样本,并通过扫描电子显微镜和高通量测序分析微生物疾病,以保存南海一号。1次海难。通过全基因组测序,检测不同条件下患病微生物的酶活性和基因表达水平,探索患病微生物的生物降解机理。结果表明,船体木材表面有明显的真菌定植,枯萎病菌NK-NH1为表面优势病菌。NK-NH1具有较强的纤维素和木质素降解能力。其全基因组大小为52,389,955bp,它包含17,402个基因。它具有多种参与纤维素和木质素降解的关键酶基因。NK-NH1优势降解酶木质素过氧化物酶在pH=4、NaCl浓度30%、和FeSO4浓度为50mg/L,漆酶在pH=4,NaCl浓度为10%时具有最高的酶活性,和FeSO4浓度为100mg/L以上研究结果证明NK-NH1是船体木材暴露于空气中时生物降解的关键真菌,低pH值,高盐,富含硫铁化合物。该研究为南海一号的保存提供了理论依据。1次海难。
    The Nanhai No. 1 shipwreck is an ancient wooden ship in the Southern Song Dynasty. Currently, serious challenges of microbial diseases exist on the hull wood. This study aimed to obtain microbial samples from the ship hull in December 2021 and analyze the microbial diseases through scanning electron microscopy and high-throughput sequencing to preserve the Nanhai No. 1 shipwreck. The biodegradation mechanism of diseased microorganisms was explored through whole genome sequencing and the detection of enzyme activity and gene expression levels of diseased microorganisms under different conditions. The results showed that there was obvious fungal colonization on the surface of the hull wood and Fusarium solani NK-NH1 was the dominant disease fungus on the surface. NK-NH1 has strong cellulose and lignin degradation ability. Its whole genome size is 52,389,955 bp, and it contains 17,402 genes. It has a variety of key enzyme genes involved in cellulose and lignin degradation. The NK-NH1 dominant degrading enzyme lignin peroxidase has the highest enzyme activity at pH = 4, NaCl concentration of 30%, and FeSO4 concentration of 50 mg/L, while laccase has the highest enzyme activity at pH = 4, NaCl concentration of 10%, and FeSO4 concentration of 100 mg/L. The above research results prove that NK-NH1 is a key fungus to the biodegradation of ship hull wood when it is exposed to air, low pH, high salt, and rich in sulfur iron compounds. This study provides a theoretical basis for the preservation of the Nanhai No. 1 shipwreck.
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  • 文章类型: Journal Article
    开发并研究了孟多辛假单胞菌与线虫的共培养,以改善聚乳酸/聚己二酸丁二醇酯-对苯二甲酸酯(PLA/PBAT)的生物降解。共培养系统可以产生高效的PLA/PBAT降解酶系统,以降解PLA/PBAT膜。结果表明,共培养物的蛋白酶活性(11.50U/mL)和脂肪酶活性(40.46U/mL)超过了单一培养物(P。7.31U/mL的mendocina,A.线虫32.47U/mL)。使用共培养体系的PLA/PBAT膜在5天内的降解率为18.95wt%,大大高于门多辛(12.94重量%)和秀丽隐杆线虫(9.27重量%),提示门多辛和秀丽隐杆线虫具有协同降解作用。此外,P.mendocina和A.elegans可以分泌蛋白酶和脂肪酶,分别,可以催化PLA/PBAT薄膜中PLA1和PBAT的酯键,分别,并将它们水解成不同的单体和低聚物作为营养来源。因此,PLA/PBAT薄膜可以完全降解。在这项研究中,PLA/PBAT膜在共培养体系中首次得到有效降解,显著提高了PLA/PBAT薄膜的生物降解性能。
    A cocultivation of the Pseudomonas mendocina with Actinomucor elegans was developed and investigated to improve the biodegradation of polylactic acid/polybutylene adipate-co-terephthalate (PLA/PBAT). And the coculture system could produce an efficient PLA/PBAT-degrading enzymes system to degrade PLA/PBAT films. The results showed that the protease activity (11.50 U/mL) and lipase activity (40.46 U/mL) of the coculture exceeded that of the monoculture (P. mendocina of 7.31 U/mL, A. elegans of 32.47 U/mL). The degradation rate of PLA/PBAT films using the coculture system was 18.95 wt% within 5 days, which was considerably higher than that of P. mendocina (12.94 wt%) and A. elegans (9.27 wt%) individually, suggesting that P. mendocina and A. elegans had synergistic degradation. In addition, P. mendocina and A. elegans could secrete proteases and lipases, respectively, which could catalyze the ester bonds of PLA1 and PBAT in PLA/PBAT films, respectively, and hydrolyze them into different monomers and oligomers as nutrition sources. Therefore, the PLA/PBAT films could be completely degraded. In this study, the PLA/PBAT films were efficiently degraded in the coculture system for the first time, which significantly improved the biodegradation of PLA/PBAT films.
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  • 文章类型: Journal Article
    偶氮染料对生态系统和人类健康造成危害,共底物策略已成为偶氮染料生物修复的焦点。在这里,辉煌大黄鱼素(BC),模型污染物,由活性污泥驯化的Providenciarettgeri生物降解。额外的乙醇,作为共底物,可以加速P.rettgeri的生长和BC的生物降解,正如Gompertz模型所反映的那样。这种现象归因于在乙醇的协同作用下观察到的更小的代谢物和更多的潜在途径。P.rettgeri的基因组分析表明,与偶氮键切割相关的功能基因,氧化还原反应,开环和水解在偶氮染料的生物降解中起着至关重要的作用。此外,提出的机制是乙醇可能通过相关基因的表达刺激额外的还原力的产生,导致偶氮键和芳香环的裂解。然而,没有乙醇的生物降解只能部分裂解偶氮键。
    Azo dyes pose hazards to ecosystems and human health and the cosubstrate strategy has become the focus for the bioremediation of azo dyes. Herein, Brilliant Crocein (BC), a model pollutant, was biodegraded by Providencia rettgeri domesticated from activated sludge. Additional ethanol, as a cosubstrate, could accelerate P. rettgeri growth and BC biodegradation, as reflected by the Gompertz models. This phenomenon was attributed to the smaller metabolites and greater number of potential pathways observed under the synergistic effect of ethanol. Genomic analysis of P. rettgeri showed that functional genes related to azo bond cleavage, redox reactions, ring opening and hydrolysis played crucial roles in azo dye biodegradation. Furthermore, the mechanism proposed was that ethanol might stimulate the production of additional reducing power via the expression of related genes, leading to the cleavage of azo bonds and aromatic rings. However, biodegradation without ethanol could only partly cleave the azo bonds.
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  • 文章类型: Journal Article
    The widespread detection of 17β-estradiol (E2) in the environment has become an emerging concern worldwide due to its endocrine disrupting effects. This work focuses on the aerobic and anaerobic biodegradations of E2 in various sedimentary environments with different availabilities of electron acceptors, including O2, NO3-, Fe3+, SO42-, or HCO3-. The highest removal efficiency (98.9%) and shortest degradation half-life of E2 (t1/2 = 5.0 d) were achieved under aerobic condition, followed by nitrate-reducing, ferric-reducing, sulfate-reducing and methanogenic conditions. We propose four different degradation pathways of E2 based on the metabolites identified under various redox conditions. Although most of E2 was effectively removed under aerobic condition, the potential environmental risk still needs to be considered due to the residual estrogenic activity induced by estrone (E1) formation. The endocrine-disrupting activities, as indicated by estradiol equivalent (EEQ) values, were related to E2 degradation rate and metabolite formation. We further analyzed the succession of bacterial community compositions and functions using Illumina HiSeq sequencing and Phylogenetic Investigation of Communities by Reconstruction of Unobserved States (PICRUSt). The findings herein evidenced that bacterial community compositions and metabolic functions associated with different redox conditions impact the biodegradation of E2 and its endocrine-disrupting activity. This knowledge will be useful in predicting the environmental fates of estrogenic hormones in various sedimentary environments and aid in establishing appropriate strategies for eliminating potential environmental risks.
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  • 文章类型: Journal Article
    In this study, oxytetracycline (OTC) as a target pollutant in swine wastewater was removed by aerobic granular sludge (AGS). The removal rate of 300 μg/L OTC in aerobic granular sludge sequencing batch reactor (AGSBR) increased to 88.00% in 33 days and maintained stable. The chemical oxygen demand (COD), ammonium nitrogen (NH4+-N) and total phosphorus (TP) in wastewater were also efficiently removed. The removal of OTC mainly depended on the adsorption and biodegradation of AGS, and the biodegradation was increased obviously after AGS adaptation to OTC. The degradation products of OTC were analyzed by mass spectrometry. The analysis of metagenome sequencing revealed that the enzymes, such as glycosyl transferases (GTs), polysaccharide lyases (PLs) and auxiliary activities (AAs), may play an important role in the removal of OTC. The Lefse analysis showed that the Flavobacteriia, Flavobacteriales, Cryomorphaceae and Fluviicola were four kinds of microbes with significant difference in OTC feed reactor, which are considered to be drug-resistant bacteria in AGSBR. Furthermore, the dynamics of microbial community changed significantly at three levels, including the enrichment of drug-resistant microorganisms and the microorganisms that gradually reduced or even disappeared under the pressure of OTC.
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  • 文章类型: Journal Article
    Shewanella oneidensis MR-1 degrades various azo dyes under microaerophilic and anaerobic conditions, but this process is inhibited under aerobic conditions. The mechanisms underlying azo dye biodegradation and inhibition remain unknown. Therefore, we investigated metabolic and transcriptional changes in strain MR-1, which was cultured under different conditions, to elucidate these mechanisms. At the transcriptional level, genes involved in certain metabolic processes, particularly the tricarboxylic acid (TCA) cycle, amino acid biodegradation, and the electron transfer system, were significantly altered (M ≧ 2, p > 0.8 ) in the presence of methyl orange (MO). Moreover, a high concentration of dissolved oxygen heavily impacted the expression levels of genes involved in fatty acid biodegradation. Metabolome analysis revealed significant alteration (p < 0.05) in the concentrations of nine metabolites when strain MR-1 was cultured under aerobic conditions; the majority of these metabolites were closely associated with amino acid metabolism and DNA replication. Accordingly, we propose a possible pathway for MO biodegradation and discuss the most likely causes of biodegradation inhibition due to dissolved oxygen.
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  • 文章类型: Journal Article
    The biodegradation effect and mechanism of decabromodiphenyl ether (BDE-209) by crude enzyme extract from Pseudomonas aeruginosa were investigated. The results demonstrated that crude enzyme extract exhibited obviously higher degradation efficiency and shorter biodegradation time than Pseudomonas aeruginosa itself. Under the optimum conditions of pH 9.0, 35 °C and protein content of 2000 mg/L, 92.77% of the initial BDE-209 (20 mg/L) was degraded after 5 h. A BDE-209 biodegradation pathway was proposed on the basis of the biodegradation products identified by GC-MS analysis. The biodegradation mechanism showed that crude enzyme extract degraded BDE-209 into lower brominated PBDEs and OH-PBDEs through debromination and hydroxylation of the aromatic rings.
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  • 文章类型: Journal Article
    Eutrophication has occurred frequently in various lakes and reservoirs, and the metabolic excretion produced during the algae growth causes serious water pollution and threatens ecological security. Biological control approaches such as screening bacteria with the capability to degrade cyanobacteria are an environment-friendly way. An isolated antialgal strain Streptomyces sp. KY-34, was applied to degrade the cyanobacterium Microcystis aeruginosa, and the possible biodegradation mechanism was investigated. The results showed that the fermentation liquor of Streptomyces sp. KY-34 could inhibit the growth of M. aeruginosa by restrained the synthesis of chlorophyll and photosynthetic pigments, and decreasing the contents of cellular protein and non-protein, accordingly led to the increase of malondialdehyde content, and the activities of superoxide dismutase, catalase and peroxidase in algae cells. In addition, the variation of the cellular ultrastructure indicated a serious change in algal physiology. It\'s revealed that the biodegradation mechanism of M. aeruginosa should primarily be that Streptomyces sp. KY-34 caused the damage of algae cell membrane and led to the increases of antioxidant enzymes, and then the growth of M. aeruginosawas inhibited.
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