bacteriocins

细菌素
  • 文章类型: Journal Article
    由于革兰氏阳性和革兰氏阴性细菌之间的包膜差异,工程精密杀菌收缩纳米机器需要对其结构的原子级理解;然而,只有那些杀死革兰氏阴性菌是目前已知的。这里,我们报告了一种工程衍射素的原子结构,一种收缩式注射器样分子机器,可杀死革兰氏阳性细菌艰难梭菌。在一个收缩前和两个收缩后状态下捕获,每个结构在细菌靶向基板中形成六种蛋白质,能量储存躯干中的两种蛋白质,和连接鞘与膜穿管的项圈。与针对革兰氏阴性细菌的收缩机器相比,主要差异在于基板和收缩幅度,与目标包络差异一致。多功能hub-水解酶蛋白连接管和基板,并定位为在渗透过程中降解肽聚糖。全长卷尺蛋白形成跨越整个diffocin的卷曲螺旋螺旋束同源三聚体。我们的研究为设计有效的基于蛋白质的精密抗生素提供了机械见解和原理。
    Due to envelope differences between Gram-positive and Gram-negative bacteria, engineering precision bactericidal contractile nanomachines requires atomic-level understanding of their structures; however, only those killing Gram-negative bacteria are currently known. Here, we report the atomic structures of an engineered diffocin, a contractile syringe-like molecular machine that kills the Gram-positive bacterium Clostridioides difficile. Captured in one pre-contraction and two post-contraction states, each structure fashions six proteins in the bacteria-targeting baseplate, two proteins in the energy-storing trunk, and a collar linking the sheath with the membrane-penetrating tube. Compared to contractile machines targeting Gram-negative bacteria, major differences reside in the baseplate and contraction magnitude, consistent with target envelope differences. The multifunctional hub-hydrolase protein connects the tube and baseplate and is positioned to degrade peptidoglycan during penetration. The full-length tape measure protein forms a coiled-coil helix bundle homotrimer spanning the entire diffocin. Our study offers mechanical insights and principles for designing potent protein-based precision antibiotics.
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  • 文章类型: Journal Article
    细菌素是广谱抗微生物化合物或窄谱抗微生物化合物,由于其治疗由抗生素抗性致病菌引起的感染的潜力而受到重大科学关注。假双歧杆菌MM0196的基因组,从健康孕妇身上分离出粪便,被证明含有一个预测编码Pseudocin196的基因簇,一种新的羊毛抗生素,除了参与其加工的蛋白质,运输和免疫。针对各种指示菌株进行抗菌评估后,蛋白酶敏感的Pseudocin196从无细胞上清液中纯化至同质。MALDITOF质谱证实,纯化的抗微生物化合物对应的分子量为2679Da,这与从其遗传起源推断的结果是一致的。Pseudocin196基于其与乳酸乳球菌产生的含羊毛硫氨酸环的抗生素lacticin481的相似性而被分类为羊毛硫抗生素。Pseudocin196,第一个报道的由人类来源的假芽孢杆菌产生的细菌素,被证明能抑制临床相关的病原体,如梭菌属。和链球菌。从而突出了该菌株作为益生菌治疗和预防细菌感染的潜在应用。
    Bacteriocins are broad or narrow-spectrum antimicrobial compounds that have received significant scientific attention due to their potential to treat infections caused by antibiotic-resistant pathogenic bacteria. The genome of Bifidobacterium pseudocatenulatum MM0196, an antimicrobial-producing, fecal isolate from a healthy pregnant woman, was shown to contain a gene cluster predicted to encode Pseudocin 196, a novel lantibiotic, in addition to proteins involved in its processing, transport and immunity. Following antimicrobial assessment against various indicator strains, protease-sensitive Pseudocin 196 was purified to homogeneity from cell-free supernatant. MALDI TOF mass spectrometry confirmed that the purified antimicrobial compound corresponds to a molecular mass of 2679 Da, which is consistent with that deduced from its genetic origin. Pseudocin 196 is classified as a lantibiotic based on its similarity to lacticin 481, a lanthionine ring-containing lantibiotic produced by Lactococcus lactis. Pseudocin 196, the first reported bacteriocin produced by a B. pseudocatenulatum species of human origin, was shown to inhibit clinically relevant pathogens, such as Clostridium spp. and Streptococcus spp. thereby highlighting the potential application of this strain as a probiotic to treat and prevent bacterial infections.
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  • 文章类型: Journal Article
    在现代医学中越来越多地使用外源性材料作为留置医疗器械,为病原体进入人体提供了新的途径,在某些情况下,威胁生命的感染。此类材料与细菌或真菌的生物污染是手术期间的主要问题。因为这通常与生物膜形成有关并且难以治疗,顽固性感染。因此,激烈的研究工作已经开发了几种策略来保护医疗设备表面免受病原微生物的定植。这里,我们使用多巴胺作为偶联剂来涂覆四种不同的医学材料(塑料聚醚醚酮(PEEK),不锈钢,钛和硅胶导管)与细菌素,肠霉素EJ97短和硫肽微球菌P1。使用水接触角测量和X射线光电子能谱来验证材料的有效涂层。通过针对生物膜的抗微生物试验(BOAT)和电子扫描显微镜研究了在这些材料上涂覆的细菌素对万古霉素抗性屎肠球菌(VRE)菌株生物膜形成的影响。在培养的人细胞上测试了细菌素修饰的生物材料的体外生物相容性。结果表明,实现了细菌素与植入物表面的结合,两种细菌素的组合可以抑制屎肠球菌在所有四种材料上的生物膜形成。修饰的植入物对测试的人细胞没有细胞毒性。因此,用两种细菌素进行表面改性可以提供一种新颖有效的方法来防止在多种植入材料上形成生物膜。
    The ever-increasing use of exogenous materials as indwelling medical devices in modern medicine offers to pathogens new ways to gain access to human body and begin, in some cases, life threatening infections. Biofouling of such materials with bacteria or fungi is a major concern during surgeries, since this is often associated with biofilm formation and difficult to treat, recalcitrant infections. Intense research efforts have therefore developed several strategies to shield the medical devices\' surface from colonization by pathogenic microorganisms. Here, we used dopamine as a coupling agent to coat four different materials of medical interest (plastic polyetheretherketone (PEEK), stainless steel, titanium and silicone catheter) with the bacteriocins, enterocin EJ97-short and the thiopeptide micrococcin P1. Water contact angle measurements and x-ray photoelectron spectroscopy were used to verify the effective coating of the materials. The effect of bacteriocins coated on these materials on the biofilm formation by a vancomycin resistant Enterococcus faecium (VRE) strain was studied by biofilm-oriented antimicrobial test (BOAT) and electron scanning microscopy. The in vitro biocompatibility of bacteriocin-modified biomaterials was tested on cultured human cells. The results demonstrated that the binding of the bacteriocins to the implant surfaces is achieved, and the two bacteriocins in combination could inhibit biofilm formation by E. faecium on all four materials. The modified implant showed no cytotoxicity to the human cells tested. Therefore, surface modification with the two bacteriocins may offer a novel and effective way to prevent biofilm formation on a wide range of implant materials.
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  • 文章类型: Journal Article
    细菌素是由许多细菌天然产生的抗菌肽。它们在对抗抗生素抗性细菌方面具有巨大潜力,包括ESKAPE病原体。可以产生分泌细菌素的工程化活生物治疗产品(eLBP)以递送靶向细菌素生产。在这里,我们开发了一种模块化细菌素分泌平台,可用于从非致病性大肠杆菌宿主菌株中表达和分泌多种细菌素。作为概念的证明,我们创建了肠菌素A(EntA)和肠菌素B(EntB)分泌菌株,这些菌株在体外对粪肠球菌和屎肠球菌表现出强的抗菌活性,并在固体培养和液体共培养中表征这种活性。然后,我们开发了Lotka-Volterra模型,该模型可用于捕获这些竞争菌株的相互作用。我们表明,同时暴露于EntA和EntB可以延迟肠球菌的生长。我们的系统有可能用作eLBP,以分泌额外的细菌素来靶向杀死致病菌。
    Bacteriocins are antimicrobial peptides that are naturally produced by many bacteria. They hold great potential in the fight against antibiotic resistant bacteria, including ESKAPE pathogens. Engineered live biotherapeutic products (eLBPs) that secrete bacteriocins can be created to deliver targeted bacteriocin production. Here we develop a modular bacteriocin secretion platform that can be used to express and secrete multiple bacteriocins from non-pathogenic Escherichia coli host strains. As a proof of concept we create Enterocin A (EntA) and Enterocin B (EntB) secreting strains that show strong antimicrobial activity against Enterococcus faecalis and Enterococcus faecium in vitro, and characterise this activity in both solid culture and liquid co-culture. We then develop a Lotka-Volterra model that can be used to capture the interactions of these competitor strains. We show that simultaneous exposure to EntA and EntB can delay Enterococcus growth. Our system has the potential to be used as an eLBP to secrete additional bacteriocins for the targeted killing of pathogenic bacteria.
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  • 文章类型: Journal Article
    有意识消费的全球趋势在消费者对食品和包装材料的成分和质量的偏好中起着重要作用。包括可持续的。可生物降解的活性包装材料的开发可以减少由于油基塑料的使用减少和合成防腐剂的量而对环境的负面影响。这篇综述讨论了相关的功能添加剂,以提高生物聚合物基薄膜的生物活性。添加植物,微生物,动物和有机纳米粒子到生物基薄膜进行了讨论。机械的变化,透明度,对水和氧的阻隔性能进行了综述。由于微生物和氧化变质是食物变质的主要原因,讨论了天然添加剂的抗菌和抗氧化性能,包括开发可生物降解活性包装的观点。
    The global trend towards conscious consumption plays an important role in consumer preferences regarding both the composition and quality of food and packaging materials, including sustainable ones. The development of biodegradable active packaging materials could reduce both the negative impact on the environment due to a decrease in the use of oil-based plastics and the amount of synthetic preservatives. This review discusses relevant functional additives for improving the bioactivity of biopolymer-based films. Addition of plant, microbial, animal and organic nanoparticles into bio-based films is discussed. Changes in mechanical, transparency, water and oxygen barrier properties are reviewed. Since microbial and oxidative deterioration are the main causes of food spoilage, antimicrobial and antioxidant properties of natural additives are discussed, including perspective ones for the development of biodegradable active packaging.
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  • 文章类型: Journal Article
    海洋环境是地球上最大的生态栖息地,尽管是探索最少的,特别是就其微生物居民而言。海洋鱼肠是不同微生物群落的宿主,可以从中获得不同的生物活性分子。由于这些微生物群落经历的独特的环境压力,它们产生的生物活性分子往往进化出独特的适应性,赋予它们不同的结构和活性,将它们与陆地同源物区分开来。特别感兴趣的是,由于其结构和功能的多样性,是核糖体合成的抗菌肽(细菌素)。随着新出现的抗生素抗性疾病和工业对新疗法的需求的压力越来越大,海洋鱼类肠道微生物组代表了一种相对未开发的新型细菌素资源,可以证明对人类健康和水产养殖有益。这篇综述概述了海洋鱼类肠道微生物组,并探讨了其作为人类健康细菌素来源的潜力,并考虑了该领域的应用和未来研究。
    The marine environment is the largest ecological habitat on Earth, albeit one of the least explored, particularly in terms of its microbial inhabitants. The marine fish gut is host to a diverse microbial community from which diverse bioactive molecules can be sourced. Due to the unique environmental pressures these microbial communities experience, the bioactive molecules they produce often evolve unique adaptations that give them diverse structures and activities, differentiating them from terrestrial homologues. Of particular interest, due to their structural and functional diversity, are the ribosomally-synthesized antimicrobial peptides (bacteriocins). With increasing pressure from emerging antibiotic-resistant disease and industrial demand for novel therapeutics, the marine fish gut microbiome represents a relatively untapped resource of novel bacteriocins that could prove beneficial to human health and aquaculture. This review presents an overview of the marine fish gut microbiome and explores its potential as a source of bacteriocins for human health with considerations for applications and future research in this area.
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  • 文章类型: Journal Article
    癌症对人类健康构成严重威胁。尽管常规化疗仍是癌症治疗的基石,其显著的副作用和日益严重的耐药性问题使得迫切需要寻找更有效、毒性更小的抗癌药物。近年来,细菌素,微生物来源的抗菌肽,由于它们的靶向抗肿瘤活性而引起了极大的关注。这种独特的活性主要归因于它们的阳离子和两亲性质,这使得细菌素能够特异性地杀死肿瘤细胞而不伤害正常细胞。当涉及非膜破坏机制时,如凋亡诱导,细胞周期阻断,和转移抑制,作用的核心机制是通过破坏细胞膜来实现的,使细菌素具有低耐药性和高选择性。然而,细菌素在体内对水解和溶血的敏感性限制了其临床应用。为了克服这些挑战,细菌素的结构优化或其与纳米技术的结合是未来发展的建议。本文旨在研究细菌素作为抗癌药物的作用机制和研究现状。从而为其临床开发和应用提供新的见解。
    Cancer poses a severe threat to human health. Although conventional chemotherapy remains a cornerstone of cancer treatment, its significant side effects and the growing issue of drug resistance necessitate the urgent search for more efficient and less toxic anticancer drugs. In recent years, bacteriocins, antimicrobial peptides of microbial origin, have garnered significant attention due to their targeted antitumor activity. This unique activity is mainly attributed to their cationic and amphiphilic nature, which enables bacteriocins to specifically kill tumor cells without harming normal cells. When involving non-membrane-disrupting mechanisms, such as apoptosis induction, cell cycle blockade, and metastasis inhibition, the core mechanism of action is achieved by disrupting cell membranes, which endows bacteriocins with low drug resistance and high selectivity. However, the susceptibility of bacteriocins to hydrolysis and hemolysis in vivo limits their clinical application. To overcome these challenges, structural optimization of bacteriocins or their combination with nanotechnology is proposed for future development. This review aims to study the mechanism of action and current research status of bacteriocins as anticancer treatments, thus providing new insights for their clinical development and application.
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  • 文章类型: Journal Article
    细菌素是许多细菌属的次级代谢产物的名称,其必须显示抗微生物活性。尽管今天描述了几种细菌素,对于这些生物分子的分类方法尚未达成共识。此外,由于可能的毒性作用,其中许多尚未被授权用于治疗多药耐药微生物。然而,最近的研究在理解方面取得了相当大的进展,分类,并阐明了它们对微生物的作用机制,具有医学和生物技术意义。因此,在更多的当前时代,协议已经在进行中,以实现最佳使用,希望解决多种健康和食物保护问题。这篇综述旨在综合当今有关细菌素的信息,以及它们的分类,同时还提供了对这两种药物使用的未来可能性的洞察,食物,和生物技术产业。
    Bacteriocins is the name given to products of the secondary metabolism of many bacterial genera that must display antimicrobial activity. Although there are several bacteriocins described today, it has not been possible to reach a consensus on the method of classification for these biomolecules. In addition, many of them are not yet authorized for therapeutic use against multi-drug-resistant microorganisms due to possible toxic effects. However, recent research has achieved considerable progress in the understanding, classification, and elucidation of their mechanisms of action against microorganisms, which are of medical and biotechnological interest. Therefore, in more current times, protocols are already being conducted for their optimal use, in the hopes of solving multiple health and food conservation problems. This review aims to synthetize the information available nowadays regarding bacteriocins, and their classification, while also providing an insight into the future possibilities of their usage for both the pharmaceutical, food, and biotechnological industry.
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  • 文章类型: Journal Article
    在后抗生素时代,病原体的致病性和抗性增加,导致肠道炎症性疾病的增加。细菌感染仍然是动物死亡的主要原因。随着抗生素耐药性的增加,动物对炎症和疾病的抵抗力显著下降,从而降低了生产效率,增加了生产成本。这些副作用造成了严重的后果,不利于我国养猪业的发展。MicrocinC7(McC7)对广谱病原体具有有效的抗菌活性,稳定的物理化学性质,低毒性,降低抗性发展的可能性。因此,McC7作为一种潜在的临床抗菌和免疫调节剂受到越来越多的关注。McC7具有作为新一代抗生素替代品的潜力;然而,其在畜禽行业的商业应用受到限制。在这次审查中,我们总结并讨论了生物合成,生化特性,结构特征,作用机制,和McC7的免疫策略。我们还描述了McC7改善肠道健康的能力。本研究旨在为McC7作为新型饲料添加剂或新兽药在畜禽养殖业的应用提供理论依据。从而为通过饲料减轻耐药性和减轻耐药性提供了新的策略。此外,本文综述了细菌素肽的新功能和抗感染机制,并提出了重要的研究思路,产品开发,以及细菌素肽在不同领域的应用,例如食品和医疗行业。
    In the postantibiotic era, the pathogenicity and resistance of pathogens have increased, leading to an increase in intestinal inflammatory disease. Bacterial infections remain the leading cause of animal mortality. With increasing resistance to antibiotics, there has been a significant decrease in resistance to both inflammation and disease in animals, thus decreasing production efficiency and increasing production costs. These side effects have serious consequences and have detracted from the development of China\'s pig industry. Microcin C7 (McC7) demonstrates potent antibacterial activity against a broad spectrum of pathogens, stable physicochemical properties, and low toxicity, reducing the likelihood of resistance development. Thus, McC7 has received increasing attention as a potential clinical antibacterial and immunomodulatory agent. McC7 has the potential to serve as a new generation of antibiotic substitutes; however, its commercial applications in the livestock and poultry industry have been limited. In this review, we summarize and discuss the biosynthesis, biochemical properties, structural characteristics, mechanism of action, and immune strategies of McC7. We also describe the ability of McC7 to improve intestinal health. Our aim in this study was to provide a theoretical basis for the application of McC7 as a new feed additive or new veterinary drug in the livestock and poultry breeding industry, thus providing a new strategy for alleviating resistance through feed and mitigating drug resistance. Furthermore, this review provides insight into the new functions and anti-infection mechanisms of bacteriocin peptides and proposes crucial ideas for the research, product development, and application of bacteriocin peptides in different fields, such as the food and medical industries.
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  • 文章类型: Journal Article
    野生型乳酸乳球菌菌株LAC460分泌原蛋白编码的细菌素样溶素LysL,杀死一些乳球菌菌株,但对生产者没有裂解作用。LysL携带两个N端酶活性结构域(EAD),和未知的C末端,与已知结构域没有同源性。本研究旨在确定LysL的C端是否携带用于LysL的靶特异性的细胞壁结合域(CBD)。将LysL的C端推定的CBD区域与His标记的绿色荧光蛋白(HGFPuv)融合。将HGFPuv_CBDlysL基因融合体连接到pASG-IBA4载体中,并引入大肠杆菌。制备融合蛋白并用亲和层析纯化。为了分析HGFPuv_CBDLysL与乳球菌细胞的结合,该蛋白与LysL敏感和LysL抗性菌株混合,包括LysL-生产者LAC460,并分析细胞的荧光。如在荧光显微镜下看到的,HGFPuv_CBDLysL用绿色荧光修饰了对LysL敏感的CremorisMG1614的细胞表面,而抗性乳酸乳球菌菌株LM0230和LAC460仍然没有荧光。荧光板读数器证实显微镜结果仅检测来自四个测试的LysL敏感菌株的荧光,而不是来自11个测试的LysL抗性菌株的荧光。HGFPuv_CBDLysL与LysL敏感细胞的特异性结合而不是与LysL抗性菌株的特异性结合表明LysL的C端含有特异性CBD。总之,该报告提供了在乳球菌噬菌体溶素中存在CBD的实验证据。此外,HGFPuv_CBDLysL无法与LysL生产者LAC460结合,可能部分解释了宿主对其自身原蛋白的抗性。
    Wild-type Lactococcus lactis strain LAC460 secretes prophage-encoded bacteriocin-like lysin LysL, which kills some Lactococcus strains, but has no lytic effect on the producer. LysL carries two N-terminal enzymatic active domains (EAD), and an unknown C-terminus without homology to known domains. This study aimed to determine whether the C-terminus of LysL carries a cell wall binding domain (CBD) for target specificity of LysL. The C-terminal putative CBD region of LysL was fused with His-tagged green fluorescent protein (HGFPuv). The HGFPuv_CBDlysL gene fusion was ligated into the pASG-IBA4 vector, and introduced into Escherichia coli. The fusion protein was produced and purified with affinity chromatography. To analyse the binding of HGFPuv_CBDLysL to Lactococcus cells, the protein was mixed with LysL-sensitive and LysL-resistant strains, including the LysL-producer LAC460, and the fluorescence of the cells was analysed. As seen in fluorescence microscope, HGFPuv_CBDLysL decorated the cell surface of LysL-sensitive L. cremoris MG1614 with green fluorescence, whereas the resistant L. lactis strains LM0230 and LAC460 remained unfluorescent. The fluorescence plate reader confirmed the microscopy results detecting fluorescence only from four tested LysL-sensitive strains but not from 11 tested LysL-resistant strains. Specific binding of HGFPuv_CBDLysL onto the LysL-sensitive cells but not onto the LysL-resistant strains indicates that the C-terminus of LysL contains specific CBD. In conclusion, this report presents experimental evidence of the presence of a CBD in a lactococcal phage lysin. Moreover, the inability of HGFPuv_CBDLysL to bind to the LysL producer LAC460 may partly explain the host\'s resistance to its own prophage lysin.
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