Statistics as Topic

统计作为主题
  • 文章类型: Journal Article
    从统计的角度来看,单个细胞通常不是独立的实验复制。为了测试平均值的差异,来自每个实验样本的细胞可以被平均,每个样本的平均值被视为n为1。这里,我概述了如何确定每个样品平均多少个细胞。
    From a statistical standpoint, individual cells are typically not independent experimental replicates. To test for differences in mean, cells from each experimental sample can be averaged and each sample\'s average treated as an n of 1. Here, I outline how to determine how many cells to average per sample.
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  • 文章类型: Journal Article
    背景:在中国医学生中,医学统计通常被认为是一个令人生畏的学科。虽然现有研究探讨了中国研究生医学生对统计学的态度及其对学业成绩的影响,缺乏研究中国医学本科生对这一主题的态度的研究。本研究试图审查中国医学本科生对统计学的态度,评估他们对学习成就的影响,深入研究人口因素的影响。
    方法:1266名医学本科生参加了这项研究,填写包括SATS-36和其他查询的问卷。此外,医学统计课程结束时进行了检查。分析包括SATS分数和考试成绩,检查总体参与者人口和特定的人口统计亚组。
    结果:本科医学生通常对有关情感的统计数据表现出良好的倾向,认知能力,和价值组件,然而,对SATS-36的困难部分抱有较少的好感,与以前的研究结果一致。与他们的研究生相比,本科生对医学统计表现出更高的热情。然而,他们在统计学方面表现出较低的认知能力,并且倾向于低估学习统计学的价值和难度。尽管存在这些差异,本科医学生对统计学表现出真正的兴趣,并表现出对掌握该主题的强烈奉献精神。值得注意的是,学生对统计的态度可能会受到他们的专业和性别的影响。此外,学习成绩与情感之间存在统计学上显著的正相关,认知能力,值,利息,和SATS-36的努力分量,而与困难分量呈负相关。
    结论:教育工作者应仔细考虑对统计学的态度的影响,特别是在制定加强医学统计教育的策略和课程时,观察到专业和性别之间的差异。
    BACKGROUND: Among Chinese medical students, medical statistics is often perceived as a formidable subject. While existing research has explored the attitudes of Chinese postgraduate medical students towards statistics and its impact on academic performance, there is a scarcity of studies examining the attitudes of Chinese medical undergraduates on this subject. This study endeavors to scrutinize the attitudes of Chinese medical undergraduates towards statistics, assessing their ramifications on learning achievements, and delving into the influence of demographic factors.
    METHODS: 1266 medical undergraduates participated in this study, completing a questionnaire that included SATS-36 and additional queries. Furthermore, an examination was administered at the end of the medical statistics course. The analysis encompassed the SATS score and exam scores, examining both the overall participant population and specific demographic subgroups.
    RESULTS: Undergraduate medical students generally exhibit a favorable disposition towards statistics concerning Affect, Cognitive Competence, and Value components, yet harbor less favorable sentiments regarding the Difficulty component of SATS-36, aligning with previous research findings. In comparison to their postgraduate counterparts, undergraduates display heightened enthusiasm for medical statistics. However, they demonstrate a lower cognitive capacity in statistics and tend to underestimate both the value and difficulty of learning statistics. Despite these disparities, undergraduate medical students express a genuine interest in statistics and exhibit a strong dedication to mastering the subject. It is noteworthy that students\' attitudes toward statistics may be influenced by their major and gender. Additionally, there exists a statistically significant positive correlation between learning achievement and the Affect, Cognitive Competence, Value, Interest, and Effort components of the SATS-36, while a negative correlation is observed with the Difficulty component.
    CONCLUSIONS: Educators should carefully consider the influence of attitudes toward statistics, especially the variations observed among majors and genders when formulating strategies and curricula to enhance medical statistics education.
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  • 文章类型: Journal Article
    背景:统计学知识对于研究学者来说非常重要,因为他们预计将提交基于原始研究的论文作为博士课程的一部分。由于统计数据在科学数据的分析和解释中起着重要作用,博士课程开始时的强化培训是必不可少的。博士课程在印度的大学和高等教育机构中是强制性的。本研究旨在比较印度南部医学高等教育研究所的研究学者在博士学位的不同时间点(即,之前,在课程完成后不久和2-3年),以确定诸如博士课程之类的强化培训计划是否可以改变他们对统计学的知识或态度。
    方法:通过电子邮件邀请了在过去三年中完成博士学位课程的一百三十名研究学者参加研究。在课程作业之前和之后不久,对统计的知识和态度已经作为课程作业模块的一部分进行了评估。使用Google表格评估课程作业后2-3年对统计数据的知识和态度。参与是自愿的,并征求知情同意。
    结果:课程作业后,知识和态度得分显着提高(即,不久之后,变化百分比:77%,分别为43%)。然而,与课程后不久的分数相比,课程后2-3年的知识和态度分数显着降低;知识和态度分数下降了10%,分别为37%。
    结论:该研究的结论是,该课程计划有利于提高研究学者对统计学的知识和态度。课程完成后2-3年的进修课程将极大地有利于研究学者。统计教育者必须同情理解学者对统计的焦虑和态度及其对学习成果的影响。
    BACKGROUND: Knowledge of statistics is highly important for research scholars, as they are expected to submit a thesis based on original research as part of a PhD program. As statistics play a major role in the analysis and interpretation of scientific data, intensive training at the beginning of a PhD programme is essential. PhD coursework is mandatory in universities and higher education institutes in India. This study aimed to compare the scores of knowledge in statistics and attitudes towards statistics among the research scholars of an institute of medical higher education in South India at different time points of their PhD (i.e., before, soon after and 2-3 years after the coursework) to determine whether intensive training programs such as PhD coursework can change their knowledge or attitudes toward statistics.
    METHODS: One hundred and thirty research scholars who had completed PhD coursework in the last three years were invited by e-mail to be part of the study. Knowledge and attitudes toward statistics before and soon after the coursework were already assessed as part of the coursework module. Knowledge and attitudes towards statistics 2-3 years after the coursework were assessed using Google forms. Participation was voluntary, and informed consent was also sought.
    RESULTS: Knowledge and attitude scores improved significantly subsequent to the coursework (i.e., soon after, percentage of change: 77%, 43% respectively). However, there was significant reduction in knowledge and attitude scores 2-3 years after coursework compared to the scores soon after coursework; knowledge and attitude scores have decreased by 10%, 37% respectively.
    CONCLUSIONS: The study concluded that the coursework program was beneficial for improving research scholars\' knowledge and attitudes toward statistics. A refresher program 2-3 years after the coursework would greatly benefit the research scholars. Statistics educators must be empathetic to understanding scholars\' anxiety and attitudes toward statistics and its influence on learning outcomes.
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  • 文章类型: Journal Article
    零假说统计测试(NHST)中的.05边界“使许多人非常生气,并被广泛认为是一个糟糕的举动”(引用道格拉斯·亚当斯的话)。这里,Wemovepastmeta-scientificargumentsandaskanempiricalquestion:Whatisthepsychologicalstandingofthe.05boundaryforstatisticalsignificance?Wefoundthatgraduatestudentsinthepsychologicalsciencesshowsaboundaryeffectwhenrelatesp-value我们建议通过NHST中的统计训练和阅读充满“统计意义”的科学文献来学习这种心理边界。与此提议一致,本科生对0.05边界的敏感度不同。此外,研究生的边界效应的大小与他们对可疑研究实践的明确认可无关。这些发现表明,训练会在p值的初始处理中产生扭曲,但是这些可能会通过在更长的时间尺度上运行的科学过程来减弱。
    The .05 boundary within Null Hypothesis Statistical Testing (NHST) \"has made a lot of people very angry and been widely regarded as a bad move\" (to quote Douglas Adams). Here, we move past meta-scientific arguments and ask an empirical question: What is the psychological standing of the .05 boundary for statistical significance? We find that graduate students in the psychological sciences show a boundary effect when relating p-values across .05. We propose this psychological boundary is learned through statistical training in NHST and reading a scientific literature replete with \"statistical significance\". Consistent with this proposal, undergraduates do not show the same sensitivity to the .05 boundary. Additionally, the size of a graduate student\'s boundary effect is not associated with their explicit endorsement of questionable research practices. These findings suggest that training creates distortions in initial processing of p-values, but these might be dampened through scientific processes operating over longer timescales.
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  • 文章类型: Journal Article
    mi-Mic,微生物组差异丰度分析的新方法,解决了此类统计测试的关键挑战:大量测试,稀疏,不同的丰度尺度,和分类关系。mi-Mic首先将微生物计数转换为均值的分支图。然后对分支图的上层应用先验测试以检测整体关系。最后,它在沿分支图或叶子上始终重要的路径上执行Mann-Whitney测试。mi-Mic的真假阳性率比现有测试高得多,用一个新的真实到洗牌的积极分数来衡量。
    mi-Mic, a novel approach for microbiome differential abundance analysis, tackles the key challenges of such statistical tests: a large number of tests, sparsity, varying abundance scales, and taxonomic relationships. mi-Mic first converts microbial counts to a cladogram of means. It then applies a priori tests on the upper levels of the cladogram to detect overall relationships. Finally, it performs a Mann-Whitney test on paths that are consistently significant along the cladogram or on the leaves. mi-Mic has much higher true to false positives ratios than existing tests, as measured by a new real-to-shuffle positive score.
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  • 文章类型: Review
    背景:统计学家是确保临床研究的基础,包括临床试验,是以质量进行的,透明度,再现性和完整性。良好临床实践规范(GCP)是进行临床试验研究的国际质量标准。统计师需要进行GCP培训,但现有培训是通用的,至关重要的是,不包括统计活动。这导致统计人员接受培训,大多与他们在认识和执行有关统计行为的相关监管要求方面的作用和变化无关。需要与角色相关的培训是由英国NHS健康研究管理局和药品和保健产品监管机构(MHRA)认可的。
    方法:良好统计规范(统计学家GCP)项目由英国临床研究合作组织(UKCRC)注册临床试验单位(CTU)统计学家运营小组发起,并由美国国家卫生和护理研究所资助研究(NIHR),开发材料,以便为统计人员量身定制特定角色的GCP培训。通过调查对当前的GCP培训进行了审查。培训材料的开发基于MHRAGCP。与UKCRCCTU和NIHR研究人员一起进行了严格的审查和试点,并发表了MHRA的评论。最后审查是通过UKCRCCTU统计小组进行的。
    结果:调查证实了为统计人员开发专门的GCP培训的需要和愿望。一个可访问的,全面,试点培训包是为从事临床研究的统计学家量身定制的,尤其是临床试验领域。培训材料涵盖统计学参与的所有临床试验过程中的最佳实践的立法和指导。包括练习和现实生活场景,以弥合理论与实践之间的差距。综合反馈。培训材料可免费提供,供国家和国际采用。
    结论:所有研究人员都应接受GCP培训,但大多数学术统计人员进行的培训不包括与其角色相关的活动。良好统计规范(统计员GCP)项目已制定并广泛试行了新的,特定于角色,全面,为从事临床研究的统计学家量身定制的GCP培训,尤其是临床试验领域。这种特定角色的培训将鼓励最佳实践,导致透明和可重复的统计活动,根据监管机构和出资人的要求。
    BACKGROUND: Statisticians are fundamental in ensuring clinical research, including clinical trials, are conducted with quality, transparency, reproducibility and integrity. Good Clinical Practice (GCP) is an international quality standard for the conduct of clinical trials research. Statisticians are required to undertake training on GCP but existing training is generic and, crucially, does not cover statistical activities. This results in statisticians undertaking training mostly unrelated to their role and variation in awareness and implementation of relevant regulatory requirements with regards to statistical conduct. The need for role-relevant training is recognised by the UK NHS Health Research Authority and the Medicines and Healthcare products Regulatory Agency (MHRA).
    METHODS: The Good Statistical Practice (GCP for Statisticians) project was instigated by the UK Clinical Research Collaboration (UKCRC) Registered Clinical Trials Unit (CTU) Statisticians Operational Group and funded by the National Institute for Health and Care Research (NIHR), to develop materials to enable role-specific GCP training tailored to statisticians. Review of current GCP training was undertaken by survey. Development of training materials were based on MHRA GCP. Critical review and piloting was conducted with UKCRC CTU and NIHR researchers with comment from MHRA. Final review was conducted through the UKCRC CTU Statistics group.
    RESULTS: The survey confirmed the need and desire for the development of dedicated GCP training for statisticians. An accessible, comprehensive, piloted training package was developed tailored to statisticians working in clinical research, particularly the clinical trials arena. The training materials cover legislation and guidance for best practice across all clinical trial processes with statistical involvement, including exercises and real-life scenarios to bridge the gap between theory and practice. Comprehensive feedback was incorporated. The training materials are freely available for national and international adoption.
    CONCLUSIONS: All research staff should have training in GCP yet the training undertaken by most academic statisticians does not cover activities related to their role. The Good Statistical Practice (GCP for Statisticians) project has developed and extensively piloted new, role-specific, comprehensive, accessible GCP training tailored to statisticians working in clinical research, particularly the clinical trials arena. This role-specific training will encourage best practice, leading to transparent and reproducible statistical activity, as required by regulatory authorities and funders.
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  • 文章类型: Journal Article
    背景:罕见疾病试验中统计方法的建议很少,尤其是交叉设计。因此,使用来自大疱性表皮松解症研究的说明性数据集来尽可能中性地比较各种最新方法,以建立计数建议,二进制,和顺序结果变量。为此,参数化(模型平均),国际统计学家联盟选择了半参数(广义估计方程类型[GEE-like])和非参数(广义成对比较[GPC]和在R包nparLD中实现的边际模型)方法。
    结果:发现上述类型的结果变量没有统一的最佳方法,但在特殊情况下,有些方法比其他方法更好。特别是如果权力最大化是首要目标,优先化的不匹配GPC方法能够取得特别好的结果,除了适合优先考虑临床相关时间点。在某些情况下,模型平均导致了有利的结果,特别是在二元结果设置中,像类似GEE的半参数方法,还允许适当考虑周期和结转效应。基于非参数边际模型的推断能够实现高功率,尤其是在顺序结果的情况下,尽管由于治疗期的单独测试,样本量很小,当必须考虑纵向和相互作用效应时,它是合适的。
    结论:总体而言,必须在实现高功率之间找到平衡,交叉会计,period,或者遗留效应,并优先考虑临床相关时间点。
    BACKGROUND: Recommendations for statistical methods in rare disease trials are scarce, especially for cross-over designs. As a result various state-of-the-art methodologies were compared as neutrally as possible using an illustrative data set from epidermolysis bullosa research to build recommendations for count, binary, and ordinal outcome variables. For this purpose, parametric (model averaging), semiparametric (generalized estimating equations type [GEE-like]) and nonparametric (generalized pairwise comparisons [GPC] and a marginal model implemented in the R package nparLD) methods were chosen by an international consortium of statisticians.
    RESULTS: It was found that there is no uniformly best method for the aforementioned types of outcome variables, but in particular situations, there are methods that perform better than others. Especially if maximizing power is the primary goal, the prioritized unmatched GPC method was able to achieve particularly good results, besides being appropriate for prioritizing clinically relevant time points. Model averaging led to favorable results in some scenarios especially within the binary outcome setting and, like the GEE-like semiparametric method, also allows for considering period and carry-over effects properly. Inference based on the nonparametric marginal model was able to achieve high power, especially in the ordinal outcome scenario, despite small sample sizes due to separate testing of treatment periods, and is suitable when longitudinal and interaction effects have to be considered.
    CONCLUSIONS: Overall, a balance has to be found between achieving high power, accounting for cross-over, period, or carry-over effects, and prioritizing clinically relevant time points.
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  • 文章类型: Journal Article
    生物系统的比较,通过分析不同条件下的分子变化,对现代生物科学的发展起到了至关重要的作用。具体来说,差异相关分析(DCA)已用于确定基因组特征之间的关系是否因条件或结果而异.因为确定测试统计量的零分布以捕获相关性的变化是具有挑战性的,几种DCA方法利用排列,可以放松参数(例如,正态)假设。然而,由于违反了样本在空值下可交换的假设,因此置换对于DCA通常是有问题的。这里,我们研究了基于置换的DCA的局限性,并研究了基于置换的DCA表现出较差性能的情况。实验结果表明,在等相关结构的零假设下,基于置换的DCA通常无法控制I型误差。
    The comparison of biological systems, through the analysis of molecular changes under different conditions, has played a crucial role in the progress of modern biological science. Specifically, differential correlation analysis (DCA) has been employed to determine whether relationships between genomic features differ across conditions or outcomes. Because ascertaining the null distribution of test statistics to capture variations in correlation is challenging, several DCA methods utilize permutation which can loosen parametric (e.g., normality) assumptions. However, permutation is often problematic for DCA due to violating the assumption that samples are exchangeable under the null. Here, we examine the limitations of permutation-based DCA and investigate instances where the permutation-based DCA exhibits poor performance. Experimental results show that the permutation-based DCA often fails to control the type I error under the null hypothesis of equal correlation structures.
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    文章类型: Journal Article
    本文介绍了夏威夷原住民和太平洋岛民COVID-19响应制定的标准化种族数据收集建议,Recovery,和复原力团队(NHPI3R团队)。这些建议试图解决夏威夷原住民和夏威夷不同的太平洋岛民社区的表达愿望,他们在数据和研究中寻求更大的知名度。夏威夷原住民和太平洋岛民(NHPI)种族类别是管理和预算办公室(OMB)发布的1997年统计政策指令15中列出的5个种族类别之一。OMB指令为联邦调查中的种族数据收集设定了最低标准,行政形式,记录,和其他数据收集。NHPI3R团队的建议为详细的数据收集提供了标准,可以提高较小社区的识别能力,主张,满足自己的需求。本文还介绍了通过由数据驱动的决策和政策影响的NHPI社区成员和领导人领导的协作和迭代过程吸取的经验教训。NHPI3R团队专注于扩大和标准化比赛数据收集,作为其COVID-19应对工作的一部分,但是实施这些建议可能会产生远远超出大流行的好处。
    This article describes recommendations for standardized race data collection developed by the Hawai\'i Native Hawaiian and Pacific Islander COVID-19 Response, Recovery, and Resilience Team (NHPI 3R Team). These recommendations attempt to address the expressed desires of Native Hawaiians and the diverse Pacific Islander communities in Hawai\'i who seek greater visibility in data and research. The Native Hawaiian and Pacific Islander (NHPI) racial category is 1 of the 5 racial categories listed in the 1997 Statistical Policy Directive #15 issued by the Office of Management and Budget (OMB). The OMB directive sets the minimum standard for collection of race data in federal surveys, administrative forms, records, and other data collection. The NHPI 3R Team\'s recommendation provides a standard for detailed data collection that could improve smaller communities\' ability to identify, advocate for, and address their own needs. The article also describes lessons learned through the collaborative and iterative process that was led by members and leaders of NHPI communities impacted by data driven decisions and policies. The NHPI 3R Team focused on expanding and standardizing race data collection as part of their COVID-19 response efforts, but implementation of the recommendations could produce benefits well beyond the pandemic.
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  • 文章类型: Journal Article
    目的:人们对统计信息的图形或数字表示的理解不同。然而,在决定选择或使用哪种表示时,评估这些技能通常是不可行的。这项研究调查了人们是否选择了他们更好理解的表征,这种选择是否可以提高对风险的理解,以及结果是否受参与者技能(图形识字和算术)的影响。
    方法:在实验中,160名参与者使用数字或图形表示获得了有关止痛药的益处和副作用的信息。在“无选择”条件下,将代表随机分配给每位参与者.在“选择”条件下,参与者可以选择他们希望收到的代表。该研究评估了要点和逐字知识(即时理解和回忆),信息的可访问性,代表性的吸引力,以及图形识字和算术。
    结果:在“选择”条件下,大多数(62.5%)选择图形格式,然而,选择图形或数字格式的人之间的图形素养或算术能力(年龄或性别)没有差异。而选择稍微增加了逐字知识,与随机分配相比,它没有提高要点或总体知识。然而,选择代表的参与者将代表评为更具吸引力,那些选择图表的人认为它们比那些没有选择的人更容易获得。
    结论:样本由受过高等教育的本科生组成,其图形素养高于一般人群。就参与者的健康而言,这项任务无关紧要。
    结论:当人们可以在表示之间进行选择时,他们无法更好地识别他们理解的内容,但在很大程度上基于代表对他们的吸引力。
    结论:人们在理解统计信息的图形或数字表示方面存在系统性差异。然而,评估这些潜在的技能,以获得正确的代表给正确的人在实践中是不可行的。实现这一目标的一种简单而有效的方法可能是让人们自己在表示中进行选择。然而,我们的研究表明,与随机确定表征相比,允许参与者选择表征(数字v图形)并没有提高整体或要点知识,尽管它确实稍微提高了逐字知识。相反,参与者在很大程度上选择了他们认为更具吸引力的代表。最喜欢的图形表示,包括那些图形素养低的人。因此,重要的是开发图形表示,即使对于图形素养较低的人来说,不仅具有吸引力,而且还可以理解。
    People differ in whether they understand graphical or numerical representations of statistical information better. However, assessing these skills is often not feasible when deciding which representation to select or use. This study investigates whether people choose the representation they understand better, whether this choice can improve risk comprehension, and whether results are influenced by participants\' skills (graph literacy and numeracy).
    In an experiment, 160 participants received information about the benefits and side effects of painkillers using either a numerical or a graphical representation. In the \"no choice\" condition, the representation was randomly assigned to each participant. In the \"choice\" condition, participants could select the representation they would like to receive. The study assessed gist and verbatim knowledge (immediate comprehension and recall), accessibility of the information, attractiveness of the representation, as well as graph literacy and numeracy.
    In the \"choice\" condition, most (62.5%) chose the graphical format, yet there was no difference in graph literacy or numeracy (nor age or gender) between people who chose the graphical or the numerical format. Whereas choice slightly increased verbatim knowledge, it did not improve gist or overall knowledge compared with random assignment. However, participants who chose a representation rated the representation as more attractive, and those who chose graphs rated them as more accessible than those without a choice.
    The sample consisted of highly educated undergraduate students with higher graph literacy than the general population. The task was inconsequential for participants in terms of their health.
    When people can choose between representations, they fail to identify what they comprehend better but largely base that choice on how attractive the representation is for them.
    People differ systematically in whether they understand graphical or numerical representations of statistical information better. However, assessing these underlying skills to get the right representation to the right people is not feasible in practice. A simple and efficient method to achieve this could be to let people choose among representations themselves.However, our study showed that allowing participants to choose a representation (numerical v. graphical) did not improve overall or gist knowledge compared with determining the representation randomly, even though it did slightly improve verbatim knowledge.Rather, participants largely chose the representation they found more attractive. Most preferred the graphical representation, including those with low graph literacy.It would therefore be important to develop graphical representations that are not only attractive but also comprehensible even for people with low graph literacy.
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