Genosensor

Genosensor
  • 文章类型: Journal Article
    快速、灵敏地检测食品污染物对于及时预防和治疗食源性疾病变得越来越重要。在这次审查中,我们讨论了电化学生物传感器的最新进展,快速,敏感,和用户友好的分析设备及其在食品安全分析中的应用,由于电化学检测的分析特性以及生物受体(抗体,DNA,适体,肽,分子印迹聚合物,酶,噬菌体,等。).它们可以提供食品污染物(如过敏原)所需的低检测限,杀虫剂,抗生素痕迹,毒素,细菌,等。我们提供了广泛的电化学生物传感设计的概述,并考虑了该技术在食品控制中的未来机会。
    The rapid and sensitive detection of food contaminants is becoming increasingly important for timely prevention and treatment of foodborne disease. In this review, we discuss recent developments of electrochemical biosensors as facile, rapid, sensitive, and user-friendly analytical devices and their applications in food safety analysis, owing to the analytical characteristics of electrochemical detection and to advances in the design and production of bioreceptors (antibodies, DNA, aptamers, peptides, molecular imprinted polymers, enzymes, bacteriophages, etc.). They can offer a low limit of detection required for food contaminants such as allergens, pesticides, antibiotic traces, toxins, bacteria, etc. We provide an overview of a broad range of electrochemical biosensing designs and consider future opportunities for this technology in food control.
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  • 文章类型: Journal Article
    快速有效的诊断是监测当前冠状病毒2(CoV-2)大流行的第一步。在这里,我们使用磁性纳米复合材料和DNA夹心探针建立了简单而灵敏的电化学测定法,以快速定量CoV-2核衣壳(N)基因至0.37fM水平。该测定使用一对特异性DNA探针。捕获探针与Au修饰的磁性还原氧化石墨烯(AMrGO)纳米复合材料共价缀合,以有效捕获靶RNA。相比之下,检测探针与过氧化物酶连接用于信号放大。探针靶向COV-2基因,允许特定的磁分离,酶信号放大,和随后产生的伏安电流与45分钟的总测定时间。所开发的生物传感器具有较高的选择性,可以区分非特异性基因序列。合成的COV-2N基因可以在血清和唾液中高效检测,而1-bp错配基因产生的反应较低。基因传感器的性能在5aM-50pM的广泛线性范围内良好。对于合成的N基因,我们在人类唾液中达到了0.37、0.33和0.19fM的检测限,尿液,和血清。这个简单的,选择性,和敏感的基因传感器可以有各种基于遗传学的生物传感和诊断应用。
    Fast and effective diagnosis is the first step in monitoring the current coronavirus 2 (CoV-2) pandemic. Herein, we establish a simple and sensitive electrochemical assay using magnetic nanocomposite and DNA sandwich probes to rapidly quantify the CoV-2 nucleocapsid (N) gene down to the 0.37 fM level. This assay uses a pair of specific DNA probes. The capture probe is covalently conjugated to Au-decorated magnetic reduced graphene oxide (AMrGO) nanocomposite for efficiently capturing target RNA. In contrast, the detection probe is linked to peroxidase for signal amplification. The probes target the COV-2 gene, allowing for specific magnetic separation, enzymatic signal amplification, and subsequent generation of voltammetric current with a total assay time of 45 min. The developed biosensor has high selectivity and can discriminate non-specific gene sequences. Synthetic COV-2 N-gene can be detected efficiently in serum and saliva, while 1-bp mismatch gene yielded a low response. The performance of the genosensor was good in an extensive linear range of 5 aM-50 pM. For synthetic N-gene, we achieved the detection limit of 0.37, 0.33, and 0.19 fM in human saliva, urine, and serum. This simple, selective, and sensitive genosensor could have various genetics-based biosensing and diagnostic applications.
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  • 文章类型: Journal Article
    COVID-19大流行在全世界产生了毁灭性的影响,在一长串国家的卫生系统和经济中产生严重的危机,甚至是发达的。因此,高度敏感和选择性的分析生物平台,允许分离和快速检测严重的急性呼吸道综合征冠状病毒2(SARS-CoV-2),是非常必要的。自2020年以来,已经发表了一些评论,他们中的大多数专注于从RNA中检测SARS-CoV-2的不同策略,由于病毒的存在而产生的病毒蛋白或宿主抗体。在这次审查中,特别介绍了用于检测SARS-CoV-2RNA的最相关的生物传感器,特别强调生物识别层的讨论和用于转导杂交事件的不同方案。
    The COVID-19 pandemic had devastating effects throughout the world, producing a severe crisis in the health systems and in the economy of a long list of countries, even developed ones. Therefore, highly sensitive and selective analytical bioplatforms that allow the descentralized and fast detection of the severe acute respiratory síndrome coronavirus 2 (SARS-CoV-2), are extremely necessary. Since 2020, several reviews have been published, most of them focused on the different strategies to detect the SARS-CoV-2, either from RNA, viral proteins or host antibodies produced due to the presence of the virus. In this review, the most relevant biosensors for the detection of SARS-CoV-2 RNA are particularly addressed, with special emphasis on the discussion of the biorecognition layers and the different schemes for transducing the hybridization event.
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  • 文章类型: Journal Article
    缺乏可靠的针对特定物种的疟疾即时诊断工具(POC)仍然是有效疾病管理的重大挫折。部分原因是当前疟疾POC诊断试剂盒的灵敏度和特异性有限,尤其是在低密度寄生虫血症和混合物种感染的情况下。在这项研究中,我们描述了第一个基于电化学阻抗谱(EIS)的无标记基于DNA的基因传感器,用于恶性疟原虫的物种特异性检测,疟原虫和卵卵圆虫。三种特定物种的基因传感器的检测限(LOD)在18.7aM至43.6aM的阿多摩尔浓度下下降,低于先前报道的疟疾基因传感器的检测限。更重要的是,使用纯化的基因组DNA和来自临床样本的配对全血裂解物,将三种基因传感器的诊断性能与定量实时聚合酶链反应(qPCR)分析进行了比较.值得注意的是,所有qPCR阳性的纯化基因组DNA样本均通过基因传感器正确鉴定,这表明3种疟疾的敏感性均为100%.三个基因传感器的特异性范围从66.7%到100.0%,治疗周转时间(TTAT)在30分钟内,这与当前疟疾POC诊断工具的TTAT相当。这项工作代表了朝着开发用于在POC诊断疟疾的准确,快速的基于物种特异性核酸的工具包迈出的重要一步。
    The absence of reliable species-specific diagnostic tools for malaria at point-of-care (POC) remains a major setback towards effective disease management. This is partly due to the limited sensitivity and specificity of the current malaria POC diagnostic kits especially in cases of low-density parasitaemia and mixed species infections. In this study, we describe the first label-free DNA-based genosensors based on electrochemical impedance spectroscopy (EIS) for species-specific detection of P. falciparum, P. malariae and P. ovale. The limits of detection (LOD) for the three species-specific genosensors were down in attomolar concentrations ranging from 18.7 aM to 43.6 aM, which is below the detection limits of previously reported malaria genosensors. More importantly, the diagnostic performance of the three genosensors were compared to quantitative real-time polymerase chain reaction (qPCR) assays using purified genomic DNA and the paired whole blood lysates from clinical samples. Remarkably, all the qPCR-positive purified genomic DNA samples were correctly identified by the genosensors indicating 100% sensitivity for each of the three malaria species. The specificities of the three genosensors ranged from 66.7% to 100.0% with a Therapeutic Turnaround Time (TTAT) within 30 min, which is comparable to the TTAT of current POC diagnostic tools for malaria. This work represents a significant step towards the development of accurate and rapid species-specific nucleic acid-based toolkits for the diagnosis of malaria at the POC.
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  • 文章类型: Journal Article
    鲍曼不动杆菌(A.鲍曼不动杆菌)在表型上与钙乙酸不动杆菌-A.鲍曼不动杆菌(ACB)复杂成员使用常规实验室方法。早期诊断在控制鲍曼不动杆菌感染中起着重要作用,然而敏感的诊断测试。在这项研究中,我们开发了一种基于酶的电化学基因传感器,用于鲍曼不动杆菌中blaOXA-51样基因的不对称PCR(aPCR)扩增子检测。设计了A.baumanniiblaOXA-51样基因PCR引物,具有在5'末端用FAM修饰的反向引物。设计了一种blaOXA-51样基因序列特异性生物素标记的捕获探针,并使用沉积在链霉亲和素修饰的工作电极上的合成低聚物(FAM标记)进行了固定,丝网印刷碳电极(SPCE)。zot基因用作内部对照,生物素和FAM标记为正向和反向引物,分别。使用不对称PCR(aPCR)扩增blaOXA-51样基因以产生使用设计的SPCE检测的单链扩增子。安培电流响应是用过氧化物酶缀合的,抗荧光素抗体.使用参考和临床鲍曼不动杆菌菌株和其他医院细菌测试测定。基因组水平和细菌细胞水平的分析灵敏度为0.5pg/mL(1.443µA)和103CFU/mL,分别。该测定对于鲍曼不动杆菌是100%特异性和敏感性的。基于加速稳定性能,开发的基因传感器在4°C下储存时稳定1.6年,在>25°C下储存长达28天。所开发的电化学基因传感器具有特异性和敏感性,即使在温带地区也能准确诊断鲍曼不动杆菌感染。
    Acinetobacter baumannii (A. baumannii) are phenotypically indistinguishable from the Acinetobacter calcoaceticus−A. baumannii (ACB) complex members using routine laboratory methods. Early diagnosis plays an important role in controlling A. baumannii infections and this could be assisted by the development of a rapid, yet sensitive diagnostic test. In this study, we developed an enzyme-based electrochemical genosensor for asymmetric PCR (aPCR) amplicon detection of the blaOXA-51-like gene in A. baumannii. A. baumanniiblaOXA-51-like gene PCR primers were designed, having the reverse primer modified at the 5′ end with FAM. A blaOXA-51-like gene sequence-specific biotin labelled capture probe was designed and immobilized using a synthetic oligomer (FAM-labelled) deposited on the working electrode of a streptavidin-modified, screen-printed carbon electrode (SPCE). The zot gene was used as an internal control with biotin and FAM labelled as forward and reverse primers, respectively. The blaOXA-51-like gene was amplified using asymmetric PCR (aPCR) to generate single-stranded amplicons that were detected using the designed SPCE. The amperometric current response was detected with a peroxidase-conjugated, anti-fluorescein antibody. The assay was tested using reference and clinical A. baumannii strains and other nosocomial bacteria. The analytical sensitivity of the assay at the genomic level and bacterial cell level was 0.5 pg/mL (1.443 µA) and 103 CFU/mL, respectively. The assay was 100% specific and sensitive for A. baumannii. Based on accelerated stability performance, the developed genosensor was stable for 1.6 years when stored at 4 °C and up to 28 days at >25 °C. The developed electrochemical genosensor is specific and sensitive and could be useful for rapid, accurate diagnosis of A. baumannii infections even in temperate regions.
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  • 文章类型: Journal Article
    病毒感染是造成全世界数百万人死亡的原因。自从高度传染性和突变病毒如当代sars-cov-2大流行爆发以来,挑战了传统的诊断方法,一个完全敏感的实体,具体,快速且廉价的检测技术,具有最低水平的假阳性或阴性,比过去几十年里的任何时候都迫切需要。作为最小化设备的生物传感器可以以简单的格式检测病毒。到目前为止,各种核酸,基于免疫和蛋白质的生物传感器被设计和测试用于识别基因组,抗原,或蛋白质水平的病毒,分别;然而,基于核酸的传感技术,这是构建基因传感器的基础,是优选的,不仅因为它们在感染早期的超敏感性和适用性,而且因为它们能够区分相同病毒的各种毒株。迄今为止,与基因传感器相关的评论文章仅限于特定的致病疾病;在这方面,本综述涵盖了电化学研究进展的综合信息,光学,和表面等离子体共振(SPR)基因传感器,应用于人类病毒\'疾病检测,也提供了病毒\'临床重要性的良好描述,病毒的常规诊断方法及其缺点。这篇综述将解决当前发展的局限性以及使用功能化纳米材料成功构建传感方法所涉及的未来挑战,并探索有关该领域的核心研究工作。
    Viral infections are responsible for the deaths of millions of people throughout the world. Since outbreak of highly contagious and mutant viruses such as contemporary sars-cov-2 pandemic, has challenged the conventional diagnostic methods, the entity of a thoroughly sensitive, specific, rapid and inexpensive detecting technique with minimum level of false-positivity or -negativity, is desperately needed more than any time in the past decades. Biosensors as minimized devices could detect viruses in simple formats. So far, various nucleic acid, immune- and protein-based biosensors were designed and tested for recognizing the genome, antigen, or protein level of viruses, respectively; however, nucleic acid-based sensing techniques, which is the foundation of constructing genosensors, are preferred not only because of their ultra-sensitivity and applicability in the early stages of infections but also for their ability to differentiate various strains of the same virus. To date, the review articles related to genosensors are just confined to particular pathogenic diseases; In this regard, the present review covers comprehensive information of the research progress of the electrochemical, optical, and surface plasmon resonance (SPR) genosensors that applied for human viruses\' diseases detection and also provides a well description of viruses\' clinical importance, the conventional diagnosis approaches of viruses and their disadvantages. This review would address the limitations in the current developments as well as the future challenges involved in the successful construction of sensing approaches with the functionalized nanomaterials and also allow exploring into core-research works regarding this area.
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  • 文章类型: Journal Article
    无金属成本有效的生物相容性分子对于光电化学生物测定是有益的。在这里,通过接枝聚合制备壳聚糖(CS)共轭丁胺酮。利用光吸收/发射性质,全面研究了CS的自由基活性位点之间的结构完整性及其与丁酮的反应性OH基团在接枝过程中的可能共轭途径,NMR,FT-IR和XPS分析。在干燥的片状状态以及滴注形式下研究了CS缀合的丁酮(CSB)的荧光发射。CSB修饰的玻碳电极的循环伏安研究在磷酸盐缓冲盐水电解质中表现出2e-/2H转移反应,经过表面约束过程,相关系数为0.99。不像原始的Butein,CSB修饰电极在4至9的各种pH下显示出高度可逆的氧化还原行为。对于概念验证,对CSB修饰的柔性丝网印刷电极进行了处理,以在超低的样品浓度下对外泌体CD24特异性核酸进行电化学生物传感,有希望的卵巢癌诊断。
    Metal-free cost-efficient biocompatible molecules are beneficial for opto-electrochemical bioassays. Herein, chitosan (CS) conjugated butein is prepared via graft polymerization. Structural integrity between radical active sites of CS and its probable conjugation routes with reactive OH group of butein during grafting were comprehensively studied using optical absorbance/emission property, NMR, FT-IR and XPS analysis. Fluorescence emission of CS-conjugated butein (CSB) was studied in dried flaky state as well as in drop casted form. Cyclic voltammetric study of CSB modified glassy carbon electrode exhibits 2e-/2H+ transfer reaction in phosphate buffered saline electrolyte following a surface-confined process with a correlation coefficient of 0.99. Unlike pristine butein, CSB modified electrode display a highly reversible redox behavior under various pH ranging from 4 to 9. For the proof-of-concept CSB-modified flexible screen printed electrodes were processed for electrochemical biosensing of exosomal CD24 specific nucleic acid at an ultralow sample concentration, promising for ovarian cancer diagnosis.
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  • 文章类型: Journal Article
    病毒是许多相关疾病的病因,包括流感,埃博拉病毒,艾滋病毒/艾滋病,和COVID-19。它的快速复制和高传播性不仅会对个人而且会对集体健康造成严重后果,造成深刻的经济影响。在这种情况下,诊断工具非常重要,允许快速,精确,和大量个人的低成本测试。目前,基于PCR的技术是诊断病毒性疾病的金标准。虽然这些可以高精度地诊断不同的疾病,它们仍然存在显著的缺点。它们的主要缺点包括获得结果的时间很长,需要专门的专业人员和设备,要求在研究中心进行测试。在这种情况下,生物传感器已被认为是有希望的替代品,精确,低成本,和病毒性疾病的现场诊断。这篇重要的评论文章描述了过去五年中在用于诊断病毒感染的电化学生物传感器方面取得的进展。首先,基因传感器和aptasensor的病毒检测和病毒性疾病诊断的详细介绍了有关探针固定方法,检测方法(无标签和三明治),和放大策略。Follows,免疫传感器被强调,包括许多不同的建设策略,如无标签,三明治,竞争性,和侧流测定。然后,介绍并讨论了用于检测病毒疾病相关生物标志物的生物传感器,以及与传统技术相比的护理系统及其优势。最后,将电化学装置商业化的困难与诸如芯片实验室和柔性传感器等未来趋势一起进行了严格讨论。
    Viruses are the causing agents for many relevant diseases, including influenza, Ebola, HIV/AIDS, and COVID-19. Its rapid replication and high transmissibility can lead to serious consequences not only to the individual but also to collective health, causing deep economic impacts. In this scenario, diagnosis tools are of significant importance, allowing the rapid, precise, and low-cost testing of a substantial number of individuals. Currently, PCR-based techniques are the gold standard for the diagnosis of viral diseases. Although these allow the diagnosis of different illnesses with high precision, they still present significant drawbacks. Their main disadvantages include long periods for obtaining results and the need for specialized professionals and equipment, requiring the tests to be performed in research centers. In this scenario, biosensors have been presented as promising alternatives for the rapid, precise, low-cost, and on-site diagnosis of viral diseases. This critical review article describes the advancements achieved in the last five years regarding electrochemical biosensors for the diagnosis of viral infections. First, genosensors and aptasensors for the detection of virus and the diagnosis of viral diseases are presented in detail regarding probe immobilization approaches, detection methods (label-free and sandwich), and amplification strategies. Following, immunosensors are highlighted, including many different construction strategies such as label-free, sandwich, competitive, and lateral-flow assays. Then, biosensors for the detection of viral-diseases-related biomarkers are presented and discussed, as well as point of care systems and their advantages when compared to traditional techniques. Last, the difficulties of commercializing electrochemical devices are critically discussed in conjunction with future trends such as lab-on-a-chip and flexible sensors.
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  • 文章类型: Journal Article
    Alicyclobacillus acidoterrestris is an acidophilic and thermophilic bacterium present in the soil, often associated with the spoilage of acidic juices, such as orange juice. Their spores resist pasteurization and, when reactivated, modify the organoleptic properties of the juice, making it unsuitable for consumption, due mainly to production of guaiacol. Biosensors are detection devices that respond quickly and are easy to handle, with great potential for use in the juice production chain. In this context, this work reports an electrochemical genosensor for detection of A. acidoterrestris, based on a graphite electrode modified with electrochemically reduced graphene oxide, a polymer derived from 3-hydroxybenzoic acid and a specific DNA probe sequence complementary with the genomic DNA of A. acidoterrestris. Detection of the target was performed by monitoring the oxidation peak of the Hoechst 33258, a common DNA stainer. The genosensor detection limit was 12 ng mL-1 and it kept 77% of response after ten weeks, and a test showed that orange juice does not interfere with bacteria lysate detection. This biosensor is the first platform for electrochemical detection of the genomic DNA of A. acidoterrestris in the literature, and the first to use Hoechst 33258 as indicator with whole genomic DNA molecules.
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  • 文章类型: Journal Article
    A voltammetric genosensor has been developed for the early diagnosis of COVID-19 by determination of RNA-dependent RNA polymerase (RdRP) sequence as a specific target of novel coronavirus. The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) uses an RdRP for the replication of its genome and the transcription of its genes. Here, the silver ions (Ag+) in the hexathia-18-crown-6 (HT18C6) were used for the first time as a redox probe. Then, the HT18C6(Ag) incorporated carbon paste electrode (CPE) was further modified with chitosan and PAMAM dendrimer-coated silicon quantum dots (SiQDs@PAMAM) for immobilization of probe sequences (aminated oligonucleotides). The current intensity of differential pulse voltammetry using the redox probe was found to decrease with increasing the concentration of target sequence. Based on such signal-off trend, the proposed genosensor exhibited a good linear response to SARS-CoV-2 RdRP in the concentration range 1.0 pM-8.0 nM with a regression equation I (μA) = - 6.555 log [RdRP sequence] (pM) + 32.676 (R2 = 0.995) and a limit of detection (LOD) of 0.3 pM. The standard addition method with different spike concentrations of RdRP sequence in human sputum samples showed a good recovery for real sample analysis (> 95%). Therefore, the developed voltammetric genosensor can be used to determine SARS-CoV-2 RdRP sequence in sputum samples. PAMAM-functionalized SiQDs were used as a versatile electrochemical platform for the SARS-CoV-2 RdRP detection based on a signal off sensing strategy. In this study, for the first time, the silver ions (Ag+) in the hexathia-18-crown-6 carrier were applied as an electrochemical probe.
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