GAS7

Gas7
  • 文章类型: Journal Article
    青光眼的不良结局和分类的可能性因种族而异,国家,性别,和家族病史。几乎,50代表候选基因被认为是自GWAS出现以来原发性开角型青光眼(POAG)发生的潜在贡献者。我们的调查是第一个报道Toll样受体4(TLR4)和生长停滞特异性7(GAS7)在沈阳人群中,中国;调查(TLR4)或GAS7基因中的单核苷酸多态性(SNP)是否是沈阳人群POAG的危险因素,并探讨其潜在的致病机制。选取2015年7月至2019年6月在沈阳市第四人民医院就诊的POAG患者。共纳入218名POAG患者和252名对照。对TLR4的八个潜在功能性SNP(rs7868859、rs7873784、rs77358523和rs752998)和GAS7(rs8012311、rs11656696、rs74629981和rs9900085)进行了基因分型。采用多因素分析评价TLR4、GAS7和POAG的相关性。TLR4的rs7873784等位基因频率表明GC(P=0.030),CC(P=0.040),与CC基因型相比,POAG患者的GCCC基因型(P=0.009)显着高于对照组。GAS7基因的rs8072311和rs9900085也与POAG显著相干。单倍型分析发现,TLR4基因的C-A-T-A单倍型(顺序:rs7873784-rs77358523-rs752998-rs7868859)和GAS7的两个单倍型A-C-C-A和C-C-A-C(顺序:rs9900085-rs7461s981<66srAG)的易感性与P在这项研究中,在沈阳人群中,TLR4的rs7868859和GAS7的rs8012311和rs9900085多态性首次被鉴定为与POAG相关,中国。
    The potential for adverse outcomes and classifications of glaucoma differ among race, country, gender, and family medical history. Nearly, 50 represent candidate genes are considered as potential contributors to the happening for the primary open-angle glaucoma (POAG) since the advent of GWASs. Our investigation is the first to report the Toll-like receptor 4 (TLR4) and growth arrest-specific 7 (GAS7) among people in Shenyang, China; to investigate whether single-nucleotide polymorphisms (SNPs) in (TLR4) or GAS7 gene are risk factors for POAG among people in Shenyang, China; and also to explore their potential pathogenic mechanisms. POAG patients from July 2015 to June 2019 at Shenyang Fourth People\'s Hospital were selected. A total of 218 POAG patients and 252 controls were enrolled. Eight potentially functional SNPs of TLR4 (rs7868859, rs7873784, rs77358523, and rs752998) and GAS7 (rs8012311, rs11656696, rs74629981, and rs9900085) were genotyped. Multifactor analysis was conducted to evaluate the correlation between TLR4, GAS7, and POAG. The allele frequency of rs7873784 of TLR4 demonstrated that the GC (P = 0.030), CC (P = 0.040), and GC + CC genotypes (P = 0.009) were significantly higher compared with CC genotype for POAG patients than that for controls. The rs8072311 and rs9900085 of GAS7 gene also were significantly associated with POAG. Haplotype analysis found that the C-A-T-A haplotype (order: rs7873784-rs77358523-rs752998-rs7868859) of TLR4 gene and the two haplotypes A-C-C-A and C-C-A-C of GAS7 (order: rs9900085-rs74629981-rs8072311-rs11656696) were associated with an elevated susceptibility to POAG (P < 0.05). In this study, rs7868859 of TLR4 and rs8012311 and rs9900085 polymorphisms of GAS7 were first identified to be related to POAG among people in Shenyang, China.
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  • 文章类型: Journal Article
    Background Intraocular pressure (IOP) is a highly heritable risk factor for primary open-angle glaucoma (POAG), with at least 27 related genes; however, we are still not aware as to which receptors or genes that the main components of cannabis use to lower IOP. Methods In the current study, we used data from the UK Biobank (UKBB) to assess the relationship of growth arrest-specific 7 (GAS7) with IOP and cannabis in 37,046 subjects. GAS7, at chromosome 17p31.1, is quite close to a cannabis receptor at chromosome 17p31.3. For comparison, we chose a second IOP/glaucoma gene, CDKN2B-AS1 on chromosome 9p21.3, with no known relationship to cannabis. In addition, we examined the effect of CB1, GPR18, and cannabis on IOP; these two genes are associated with cannabis IOP reduction in mice. Results Total cannabis use versus IOP and genotypes of GAS7 SNP rs9913911 in the 37,046 subjects showed significant variation [p<0.001, univariate analysis of variance (ANOVA)]. Carriers of the GAS7 rs9913911 minor allele G had lower IOP with increased cannabis use. Total cannabis use versus IOP of genotypes of CDKN2B-AS1 SNP rs944801 in 37,046 subjects had IOP variability with cannabis use that was insignificant (p=0.138). We analyzed the relationship of CB1 SNP rs806365 and GPR18 SNP rs3742130 with cannabis use and IOP, which was insignificant. CB1 and GPR18 are probably not involved in cannabis-associated human IOP reduction, unlike what has been reported in mice. Conclusion Cannabis-based treatments, which apparently act on the GAS7 gene, can be utilized to reduce IOP. However, their disadvantages outweigh their advantages, which was not the case when the initial reports of marijuana\'s effects on IOP were published in the 1970s. Hence, cannabis-based glaucoma treatments are now of questionable value.
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  • 文章类型: Journal Article
    脂肪酸(FA)组成是评估猪肉质的最重要参数之一。猪肉中的FA成分也会影响人体健康。我们的目的是通过全基因组关联研究(GWAS)和GWAS后高分辨率作图分析,在长白猪和韩国本地猪之间的大型F2杂交中,确定影响背肌FA谱的数量性状基因座(QTL)和位置候选基因。我们使用PorcineSNP60KBeadChip和线性混合模型进行GWAS。在SSC8,SSC12,SSC14和SSC16中检测到四个全基因组重要的QTL区域(p<2.53×10-7)。SSC12中QTL对油酸的几种共定位,亚油酸,花生四烯酸,单不饱和脂肪酸,多不饱和脂肪酸,观察到多不饱和/饱和FA比。为了细化SSC12中的QTL区域,应用了连锁和连锁不平衡分析,可以将关键区域缩小到0.749Mb区域。在这个地区的基因中,基于进一步的条件关联分析,GAS7、MYH2和MYH3被鉴定为强的新候选基因。这些发现为猪肉中FA组成的遗传基础提供了新的见解,并可能有助于改善猪肉品质。
    Fatty acid (FA) composition is one of the most important parameters for the assessment of meat quality in pigs. The FA composition in pork can also affect human health. Our aim was to identify quantitative trait loci (QTLs) and positional candidate genes affecting the FA profile of the longissimus dorsi muscle in a large F2 intercross between Landrace and Korean native pigs comprising 1105 F2 progeny by genome-wide association studies (GWAS) and post-GWAS high-resolution mapping analyses. We performed GWAS using the PorcineSNP60K BeadChip and a linear mixed model. Four genome-wide significant QTL regions in SSC8, SSC12, SSC14, and SSC16 were detected (p < 2.53 × 10-7). Several co-localizations of QTLs in SSC12 for oleic acid, linoleic acid, arachidonic acid, monounsaturated FAs, polyunsaturated FAs, and the polyunsaturated/saturated FA ratio were observed. To refine the QTL region in SSC12, a linkage and linkage disequilibrium analysis was applied and could narrow down the critical region to a 0.749 Mb region. Of the genes in this region, GAS7, MYH2, and MYH3 were identified as strong novel candidate genes based on further conditional association analyses. These findings provide a novel insight into the genetic basis of FA composition in pork and could contribute to the improvement of pork quality.
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  • 文章类型: Journal Article
    Here we show that Gas7 inhibits phosphorylated tau fibrillogenesis by binding to phosphorylated tau at its non-WW domain, presumably F-BAR domain. We revealed that Gas7 binds to the third repeat domain of tau, the core element of tau oligomerization and the C-terminal domain of tau and alters the conformation not to form fibrils. These results suggest that Gas7 may serve to protect against Alzheimer\'s disease and other tauopathies by preventing tau fibrillogenesis.
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  • 文章类型: Journal Article
    Recently, miR-362-5p has attracted special interest as a novel prognostic predictor in acute myeloid leukemia (AML). However, its biological function and underlying molecular mechanism in AML remain to be further defined. Herein, we found that a significant increase in miR-362-5p expression was observed in AML patients and cell lines using quantitative real-time PCR. The expression of miR-362-5p was altered in THP-1 and HL-60 cells by transfecting with miR-362-5p mimic or inhibitor. A series of experiments showed that inhibition of miR-362-5p expression significantly suppressed cell proliferation, induced G0/G1 phase arrest and attenuated tumor growth in vivo. On the contrary, ectopic expression of miR-362-5p resulted in enhanced cell proliferation, cell cycle progression and tumor growth. Moreover, growth arrest-specific 7 (GAS7) was confirmed as a direct target gene of miR-362-5p and was negatively modulated by miR-362-5p. GAS7 overexpression imitated the tumor suppressive effect of silenced miR-362-5p on THP-1 cells. Furthermore, miR-362-5p knockdown or GAS7 overexpression obviously down-regulated the expression levels of PCNA, CDK4 and cyclin D1, but up-regulated p21 expression. Collectively, our findings demonstrate that miR-362-5p exerts oncogenic effects in AML by directly targeting GAS7, which might provide a promising therapeutic target for AML.
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  • 文章类型: Journal Article
    In view of recent data on the linkage of Gas7 protein to schizophrenia, and in view of its role in neurite outgrowth, histochemical localization of the Gas7 protein was studied in normal human brain tissue using an online tissue atlas. Selective localization to neurons in the cerebral cortex was found with moderate levels in the hippocampus and caudate, but fairly low levels were noted within the human cerebellum and was limited to small granule cells as well as the neuropil of the cerebellar molecular layers. Despite this low intensity histochemical localization in the cerebellum, molecular data indicate a substantially large number of RNA transcripts in the cerebellum that exceeded the cerebral cortex as determined by sequencing studies.
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  • 文章类型: Journal Article
    Schizophrenia is a highly heritable chronic mental disorder with significant abnormalities in brain function. The neurodevelopmental hypothesis proposes that schizophrenia originates in the prenatal period due to impairments in neuronal developmental processes such as migration and arborization, leading to abnormal brain maturation. Previous studies have identified multiple promising candidate genes that drive functions in neurodevelopment and are associated with schizophrenia. However, the molecular mechanisms of how they exert effects on the pathophysiology of schizophrenia remain largely unknown.
    In our research, we identified growth arrest specific gene 7 (GAS7) as a schizophrenia risk gene in two independent Han Chinese populations using a two-stage association study. Functional experiments were done to further explore the underlying mechanisms of the role of Gas7 in cortical development. In vitro, we discovered that Gas7 contributed to neurite outgrowth through the F-BAR domain. In vivo, overexpression of Gas7 arrested neuronal migration by increasing leading process branching, while suppression of Gas7 could inhibit neuronal migration by lengthening leading processes. Through a series of behavioral tests, we also found that Gas7-deficient mice showed sensorimotor gating deficits.
    Our results demonstrate GAS7 as a susceptibility gene for schizophrenia. Gas7 might participate in the pathogenesis of schizophrenia by regulating neurite outgrowth and neuronal migration through its C-terminal F-BAR domain. The impaired pre-pulse inhibition (PPI) of Gas7-deficient mice might mirror the disease-related behavior in schizophrenia.
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  • 文章类型: Journal Article
    目的:我们研究了已知青光眼基因的DNA拷贝数变异(CNVs)与原发性开角型青光眼(POAG)的关系。
    方法:我们的研究包括来自两项研究(NEIGHBOR和GLAUGEN)的DNA样本。所有样品用IlluminaHuman660W_Quad_v1BeadChip进行基因分型。去除非血液来源和扩增的DNA样本后,我们基于平均LogR比率和平均B等位基因频率应用质量控制步骤。随后,使用PennCNV软件分析了3057份DNA样本(1599例和1458例对照)的数据.我们将CNV定义为大小≥5千碱基(kb),并由≥5个连续探针进行询问。我们进一步将我们的研究局限于已知POAG相关基因中的CNVs,包括CDKN2B-AS1,TMCO1,SIX1/SIX6,CAV1/CAV2,LRP12-ZFPM2区域,GAS7,ATOH7,FNDC3B,CYP1B1,MYOC,OPTN,WDR36、SRBD1、TBK1和GALC。
    结果:在单个病例中发现了CDKN2B-AS1和TMCO1的基因组重复。在GAS7地区有2例重复。SIX6和ATOH7的基因组缺失分别在一个病例中被鉴定。一种情况携带TBK1删除,另一种情况携带TBK1复制。在这六个基因中没有对照具有重复或缺失。单个对照在MYOC区域中具有重复。在5例病例和2例对照中观察到GALC缺失。
    结论:对大量病例和对照的CNV分析显示,在已知的POAG易感基因中存在罕见的CNV。我们的数据表明,这些罕见的CNVs可能有助于POAG的发病机制并值得功能评估。
    OBJECTIVE: We examined the role of DNA copy number variants (CNVs) of known glaucoma genes in relation to primary open angle glaucoma (POAG).
    METHODS: Our study included DNA samples from two studies (NEIGHBOR and GLAUGEN). All the samples were genotyped with the Illumina Human660W_Quad_v1 BeadChip. After removing non-blood-derived and amplified DNA samples, we applied quality control steps based on the mean Log R Ratio and the mean B allele frequency. Subsequently, data from 3057 DNA samples (1599 cases and 1458 controls) were analyzed with PennCNV software. We defined CNVs as those ≥5 kilobases (kb) in size and interrogated by ≥5 consecutive probes. We further limited our investigation to CNVs in known POAG-related genes, including CDKN2B-AS1, TMCO1, SIX1/SIX6, CAV1/CAV2, the LRP12-ZFPM2 region, GAS7, ATOH7, FNDC3B, CYP1B1, MYOC, OPTN, WDR36, SRBD1, TBK1, and GALC.
    RESULTS: Genomic duplications of CDKN2B-AS1 and TMCO1 were each found in a single case. Two cases carried duplications in the GAS7 region. Genomic deletions of SIX6 and ATOH7 were each identified in one case. One case carried a TBK1 deletion and another case carried a TBK1 duplication. No controls had duplications or deletions in these six genes. A single control had a duplication in the MYOC region. Deletions of GALC were observed in five cases and two controls.
    CONCLUSIONS: The CNV analysis of a large set of cases and controls revealed the presence of rare CNVs in known POAG susceptibility genes. Our data suggest that these rare CNVs may contribute to POAG pathogenesis and merit functional evaluation.
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