BSA

BSA
  • 文章类型: Journal Article
    褐变是马铃薯加工过程中常见的问题;它通常通过在生产过程中添加化学品来解决。然而,由于消费者对更健康的饮食越来越感兴趣,因此需要开发抗褐变的马铃薯品种。这项研究最初确定了275种抗褐变的马铃薯品种;这些品种被缩小到8个品种,其中四个具有很高的抵抗力。通过将高抗性CIP395109.29与易褐变的Kexin23杂交,开发了杂种种群。进行了批量分离分析(BSA),通过测序数据分析和组织,鉴定了21个与抗褐变特性相关的马铃薯基因。本研究结果为今后选育具有抗褐变性状的马铃薯奠定了坚实的基础,提供识别抗褐变品种的分子标记,并为进一步研究马铃薯褐变机理提供了有价值的参考。
    Browning is a common problem that occurs during potato processing; it is typically resolved by adding chemicals during the production process. However, there is a need to develop potato varieties that are resistant to browning due to a growing consumer interest in healthier diets. This study initially identified 275 potato varieties that are resistant to browning; these were narrowed down to eight varieties, with four of them being highly resistant. A hybrid population was developed by crossing the highly resistant CIP395109.29 with the easily browned Kexin 23. Bulked segregant analysis (BSA) was conducted, which identified 21 potato genes associated with anti-browning properties through sequencing data analysis and organization. The findings of this study lay a solid groundwork for future research on breeding potatoes with anti-browning traits, offer molecular markers for identifying anti-browning varieties, and serve as a valuable reference for further investigations into potato browning mechanisms.
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  • 文章类型: Journal Article
    在这项工作中,太赫兹时域光谱法分析了两种高浓度(50和334mg/mL)的牛血清白蛋白(BSA)在三个pH值(2.5,6.5,8.5)和相同的溶剂中不含蛋白质的溶液,25°C还记录了干BSA的光谱。第一次,一种测定水溶液中蛋白质分子复介电常数的方法,没有水相的介电贡献,是提议的。表明溶解和干燥的BSA的介电常数(冻干,在天然构象中)在太赫兹频率范围内显着不同。这些差异在70cm-1附近很小,但随着频率的降低而大大增加。发现溶液中蛋白质分子的介电损耗接近水性环境的介电损耗,在这个频率范围内由水的分子间弛豫过程决定。由于介电损耗与分子动力学直接相关,这一事实表明,蛋白质的分子内动力学完全适应水环境的分子间动力学。它还表明,天然构象并不能决定蛋白质分子的所有基本特征,特别是,它不能决定蛋白质的动力学,这在很大程度上取决于水环境。
    In this work, the terahertz time-domain spectroscopy method analyzed solutions of bovine serum albumin (BSA) in two high concentrations (50 and 334 mg/mL) at three pH values (2.5, 6.5, 8.5) and the same solvents without protein, at 25°C. The spectra of dry BSA were also recorded. For the first time, a method for determining the complex dielectric permittivity of protein molecules in aqueous solutions, without the dielectric contribution of the aqueous phase, is proposed. It is shown that the dielectric permittivity of dissolved and dry BSA (lyophilized, in the native conformation) differ significantly in the terahertz frequency range. These differences are small near 70 cm-1, but they increase greatly with decreasing frequency. It was found that the dielectric losses of protein molecules in solution are close to the dielectric losses of the aqueous environment, which in this frequency range are determined by intermolecular relaxation processes of water. Since dielectric losses are directly related to molecular dynamics, this fact shows that the intramolecular dynamics of the protein completely adjusts to the intermolecular dynamics of the aqueous environment. It also indicates that the native conformation does not determine all the fundamental characteristics of a protein molecule, in particular, it does not determine the dynamics of the protein, which significantly depends on the water environment.
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  • 文章类型: Journal Article
    毫无疑问,癌症是一个全球性的医疗保健挑战。刺激新治疗方法的推广。近年来,纳米材料由于其细胞特异性递送而获得了对靶向纳米制剂的最大希望,改善治疗效果,并减少对生物体的全身毒性。纳米颗粒成功临床翻译的问题可能与以下事实有关:大多数体外测试是在正常细胞和组织的pH值进行的,从7.2到7.4。肿瘤的细胞外pH值的特征在于向5.6-7.0范围内的更酸性区域的偏移,并且代表用于增强纳米颗粒递送至癌细胞的关键靶标。在这里,我们展示了将非活性蛋白掺入HER2靶向纳米颗粒表面以在肿瘤微环境的pH范围内实现最佳细胞摄取的方法。在体外和体内证实了该方法的功效,表明在pH值为6.4时纳米颗粒与细胞的最大结合。即,荧光磁性纳米粒子,经HER2识别亲和体ZHER2:342修饰,在HER2识别方面具有经证实的特异性(与对照纳米颗粒相比,细胞摄取高62倍),被设计用于在微酸性pH值下靶向癌细胞。稳定蛋白,即,牛血清白蛋白,具有广泛可用性和生物相容性的主要血液成分之一,用于修饰纳米颗粒表面以改变靶向磁性缀合物的pH响应。最佳设计的纳米颗粒在5.6-8.0的pH范围内显示出与癌细胞相互作用的钟形依赖性,在pH值6.4时的最大细胞摄取接近肿瘤微环境。体内实验表明,静脉给药后,与仅用亲和体修饰的磁性纳米颗粒相比,BSA修饰的纳米颗粒在肿瘤中的积累高2倍。因此,我们证明了一种在不改变纳米粒子的功能成分的情况下增强靶向纳米粒子递送至癌细胞的特异性的有效方法。
    Cancer is unquestionably a global healthcare challenge, spurring the exporation of novel treatment approaches. In recent years, nanomaterials have garnered significant interest with the greatest hopes for targeted nanoformulations due to their cell-specific delivery, improved therapeutic efficacy, and reduced systemic toxicity for the organism. The problem of successful clinical translation of nanoparticles may be related to the fact that most in vitro tests are performed at pH values of normal cells and tissues, ranging from 7.2 to 7.4. The extracellular pH values of tumors are characterized by a shift to a more acidic region in the range of 5.6-7.0 and represent a crucial target for enhancing nanoparticle delivery to cancer cells. Here we show the method of non-active protein incorporation into the surface of HER2-targeted nanoparticles to achieve optimal cellular uptake within the pH range of the tumor microenvironment. The method efficacy was confirmed in vitro and in vivo showing the maximum binding of nanoparticles to cells at a pH value 6.4. Namely, fluorescent magnetic nanoparticles, modified with HER2-recognising affibody ZHER2:342, with proven specificity in terms of HER2 recognition (with 62-fold higher cellular uptake compared to control nanoparticles) were designed for targeting cancer cells at slightly acidic pH values. The stabilizing protein, namely, bovine serum albumin, one of the major blood components with widespread availability and biocompatibility, was used for the decoration of the nanoparticle surface to alter the pH response of the targeting magnetic conjugates. The optimally designed nanoparticles showed a bell-shaped dependency of interaction with cancer cells in the pH range of 5.6-8.0 with maximum cellular uptake at pH value 6.4 close to that of the tumor microenvironment. In vivo experiments revealed that after i.v. administration, BSA-decorated nanoparticles exhibited 2 times higher accumulation in tumors compared to magnetic nanoparticles modified with affibody only. Thus, we demonstrated a valid method for enhancing the specificity of targeted nanoparticle delivery to cancer cells without changing the functional components of nanoparticles.
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  • 文章类型: Journal Article
    吡哆醛-S-甲基-异硫氨基脲(PLITSC)是一类重要配体的成员,其特征在于与各种过渡金属的络合模式不同。在这一贡献中,获得了包含两个不同质子化的PLITSC配体([Fe(PLITSC-H)(PLITSC)]SO4)的新络合物2.5H2O。通过X射线分析解决了晶体结构,并进一步用于B3LYP/6-311G的优化(d,P)(H,C,N,O,S)/def2-TZVP(Fe)理论水平。通过分子中原子的量子理论检查,观察到由于质子化引起的相互作用强度和键合距离的变化。通过荧光光谱滴定和分子对接研究了[Fe(PLITSC-H)(PLITSC)]SO4对转运蛋白(牛血清白蛋白(BSA)和人血清白蛋白(HSA))的蛋白质结合亲和力。详细检查了与含有荧光氨基酸的活性口袋的相互作用,这解释了荧光猝灭。通过溴化乙锭置换滴定和分子对接来跟踪复合物与DNA之间的相互作用。沿着小沟的结合是涉及DNA附近复合物的主要过程。
    Pyridoxal-S-methyl-isothiosemicarbazone (PLITSC) is a member of an important group of ligands characterized by different complexation modes to various transition metals. In this contribution, a new complex containing two differently protonated PLITSC ligands ([Fe(PLITSC-H)(PLITSC)]SO4)∙2.5H2O was obtained. The crystal structure was solved by the X-ray analysis and used further for the optimization at B3LYP/6-311++G(d,p)(H,C,N,O,S)/def2-TZVP(Fe) level of theory. Changes in the interaction strength and bond distance due to protonation were observed upon examination by the Quantum Theory of Atoms in Molecules. The protein binding affinity of [Fe(PLITSC-H)(PLITSC)]SO4 towards transport proteins (Bovine Serum Albumin (BSA) and Human Serum Albumin (HSA)) was investigated by the spectrofluorimetric titration and molecular docking. The interactions with the active pocket containing fluorescent amino acids were examined in detail, which explained the fluorescence quenching. The interactions between complex and DNA were followed by the ethidium-bromide displacement titration and molecular docking. The binding along the minor groove was the dominant process involving complex in the proximity of DNA.
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  • 文章类型: Journal Article
    暂无摘要。
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  • 文章类型: Journal Article
    生物污染是医学工程材料面临的巨大挑战。marine-,和制药相关的应用。在这项研究中,一种新型的三甲胺N-氧化物(TMAO)-类似物单体,3-(2-甲基丙烯酰胺基)-N,N-二甲基丙胺N-氧化物(MADMPAO),通过结合生物激发的聚多巴胺(pDA)和表面引发的原子转移自由基聚合技术,合成了聚(MADMPAO)(pMPAO)刷在石英晶体微天平(QCM)芯片上的接枝。离子吸附的结果表明,从芯片表面开始的顺序pDA和pMPAO排列具有与简单pDA层不同的特性。在1和10mmol/L的低盐浓度下,由于在芯片表面外层上两性离子pMPAO刷的带电N和O-存在下,强烈的表面水合作用,在pMPAO接枝芯片上的离子吸附受到极大抑制,众所周知的“抗聚电解质”效应。在BSA吸附过程中,pMPAO嫁接也导致频移明显减少,表明对蛋白质吸附有很大的抑制作用。这归因于较弱的BSA-pMPAO相互作用。在这项研究中,DA涂层浓度最高的Au@pDA-4-pMPAO芯片在BSA吸附中保持稳定的耗散,表明该芯片具有良好的防污性能。该研究为两性离子聚合物提供了一种新型单体,并证明了pMPAO刷在防污材料开发和改性中的潜力。
    Biofouling is a great challenge for engineering material in medical-, marine-, and pharmaceutical-related applications. In this study, a novel trimethylamine N-oxide (TMAO)-analog monomer, 3-(2-methylacrylamido)-N,N-dimethylpropylamine N-oxide (MADMPAO), was synthesized and applied for the grafting of poly(MADMPAO) (pMPAO) brushes on quartz crystal microbalance (QCM) chips by the combination of bio-inspired poly-dopamine (pDA) and surface-initiated atom transfer radical polymerization technology. The result of ion adsorption exhibited that a sequential pDA and pMPAO arrangement from the chip surface had different characteristics from a simple pDA layer. Ion adsorption on pMPAO-grafted chips was greatly inhibited at low salt concentrations of 1 and 10 mmol/L due to strong surface hydration in the presence of charged N+ and O- of zwitterionic pMPAO brushes on the outer layer on the chip surface, well known as the \"anti-polyelectrolyte\" effect. During BSA adsorption, pMPAO grafting also led to a marked decrease in frequency shift, indicating great inhibition of protein adsorption. It was attributed to weaker BSA-pMPAO interaction. In this study, the Au@pDA-4-pMPAO chip with the highest coating concentration of DA kept stable dissipation in BSA adsorption, signifying that the chip had a good antifouling property. The research provided a novel monomer for zwitterionic polymer and demonstrated the potential of pMPAO brushes in the development and modification of antifouling materials.
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  • 文章类型: Journal Article
    这项工作展开了由FIL([C2C1Im][C4F9SO3]和[N1112(OH)][C4F9SO3])组成的功能化ABS,仅含氟IL([C2C1Im][CF3SO3]和[C4C1Im][CF3SO3]),已知的球状蛋白质稳定剂(蔗糖和[N1112(OH)][C4F9SO3]),低分子量碳水化合物(葡萄糖),甚至高电荷密度盐(K3PO4)。确定了三元相图,强调FIL大大提高了ABS形成的能力。功能化ABS(FIL与仅含氟IL)用于提取溶菌酶(Lys)。根据蛋白质生物相容性筛选ABSs双相区域,通过紫外-可见分光光度法分析Lys中ABS相形成成分的影响,CD光谱学,荧光光谱法,DSC,和酶测定。Lys分配行为以提取效率(%EE)为特征。结构,稳定性,在整个提取步骤中保持或改善了Lys的功能,通过CD光谱学评估,DSC,酶测定,和SDS-PAGE。总的来说,基于FIL的ABS更通用并且适合于通过适当选择相形成组分和选择富集相来调节。通过MST获得了Lys和ABS相形成组分之间的结合研究,证明了Lys和FIL聚集体之间的强相互作用。两个基于FIL的ABS(30%wt[C2C1Im][C4F9SO3]2%wtK3PO4和30%wt[C2C1Im][C4F9SO3]25%wt蔗糖)允许同时纯化Lys和BSA在单个ABS提取步骤中,两种蛋白质的收率都很高(提取效率高达100%)。通过SDS-PAGE分析验证两种回收的蛋白质的纯度。即使使用高电荷密度盐,在这项工作中开发的基于FIL的ABS似乎更适合调整。通过在单个基于FIL的ABS提取步骤中选择性分配到相反相来纯化Lys和BSA。基于FIL的ABS被提议作为蛋白质的改进提取步骤,基于它们的生物相容性,可自定义的属性,和选择性。
    This work unfolds functionalized ABSs composed of FILs ([C2C1Im][C4F9SO3] and [N1112(OH)][C4F9SO3]), mere fluoro-containing ILs ([C2C1Im][CF3SO3] and [C4C1Im][CF3SO3]), known globular protein stabilizers (sucrose and [N1112(OH)][C4F9SO3]), low-molecular-weight carbohydrate (glucose), and even high-charge density salt (K3PO4). The ternary phase diagrams were determined, stressing that FILs highly increased the ability for ABS formation. The functionalized ABSs (FILs vs. mere fluoro-containing ILs) were used to extract lysozyme (Lys). The ABSs\' biphasic regions were screened in terms of protein biocompatibility, analyzing the impact of ABS phase-forming components in Lys by UV-VIS spectrophotometry, CD spectroscopy, fluorescence spectroscopy, DSC, and enzyme assay. Lys partition behavior was characterized in terms of extraction efficiency (% EE). The structure, stability, and function of Lys were maintained or improved throughout the extraction step, as evaluated by CD spectroscopy, DSC, enzyme assay, and SDS-PAGE. Overall, FIL-based ABSs are more versatile and amenable to being tuned by the adequate choice of the phase-forming components and selecting the enriched phase. Binding studies between Lys and ABS phase-forming components were attained by MST, demonstrating the strong interaction between Lys and FILs aggregates. Two of the FIL-based ABSs (30 %wt [C2C1Im][C4F9SO3] + 2 %wt K3PO4 and 30 %wt [C2C1Im][C4F9SO3] + 25 %wt sucrose) allowed the simultaneous purification of Lys and BSA in a single ABS extraction step with high yield (extraction efficiency up to 100%) for both proteins. The purity of both recovered proteins was validated by SDS-PAGE analysis. Even with a high-charge density salt, the FIL-based ABSs developed in this work seem more amenable to be tuned. Lys and BSA were purified through selective partition to opposite phases in a single FIL-based ABS extraction step. FIL-based ABSs are proposed as an improved extraction step for proteins, based on their biocompatibility, customizable properties, and selectivity.
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  • 文章类型: Journal Article
    背景:甲状腺全切除术正在发展成为非恶性甲状腺疾病的治疗选择。因此,理想的甲状腺素替代方法是必要的,以避免这类患者因替代不足和过度而产生的不良影响.
    目的:评估最佳甲状腺素剂量与瘦体重(LBM)等潜在变量之间的相关性,体表面积(BSA),体重指数(BMI),体重,年龄,在我们研究所接受良性多结节性甲状腺肿全甲状腺切除术的患者的性别。
    方法:在Thrissur政府医学院进行了一项纵向队列研究,印度的三级护理提供者,2018年10月至2019年9月。包括100名因各种良性甲状腺疾病而接受全甲状腺切除术的成年患者。他们最初在出院时给予甲状腺素75µg,每两个月接受一次随访剂量,直到他们连续两次访问达到正常甲状腺状态。在这个阶段评估的变量包括年龄,性别,实际体重,瘦体重,BMI,和生化数据(三碘甲状腺原氨酸(T3),甲状腺素(T4),促甲状腺激素(TSH))。相关性,多元逐步回归,和方差使用EPIINFO7.2.2.6版进行。
    结果:最佳甲状腺素剂量的最佳预测因子是BSA(0.923,P<0.01)和LBM(0.921,P<0.01)。体重(0.833,P<0.01)和BMI(0.523,P<0.01)。在我们的研究中,最不显著的因素是患者的年龄(r=0.117,P<0.01)。性别与甲状腺素剂量之间没有显着关联。平均甲状腺素剂量为1.87µg/kg患者体重。
    结论:基于BSA或LBM的最佳甲状腺素替代是比单独基于BMI或体重更理想的方法。
    BACKGROUND: Total thyroidectomy is evolving as the choice of treatment for non-malignant thyroid conditions. Therefore, an ideal method of thyroxine replacement is necessary to avoid the ill effects of under- and over-replacement in such patients.
    OBJECTIVE: To assess the correlation between optimal thyroxine dose and potential variables like lean body mass (LBM), body surface area (BSA), body mass index (BMI), body weight, age, and sex in patients who underwent total thyroidectomies for benign multinodular goiters in our institute.
    METHODS: A longitudinal cohort study was undertaken at the Government Medical College Thrissur, a tertiary care provider in India, between October 2018 and September 2019. One hundred adult patients who underwent a total thyroidectomy for various benign thyroid conditions were included. They were initially given thyroxine 75 µg upon discharge and received follow-up doses every two months until they achieved euthyroid status on two consecutive visits. The variables evaluated at this stage included age, sex, actual body weight, lean body weight, BMI, and biochemical data (triiodothyronine (T3), thyroxine (T4), thyroid-stimulating hormone (TSH)). Correlation, multiple step-wise regression, and variance were carried out using EPI INFO version 7.2.2.6.
    RESULTS: The best predictors for optimum thyroxine dose were BSA (0.923, P < 0.01) and LBM (0.921, P < 0.01), compared with body weight (0.833, P < 0.01) and BMI (0.523, P < 0.01). In our study, the least significant factor was the age of the patient (r = 0.117, P < 0.01). There was no significant association between gender and thyroxine dose. The mean thyroxine dose was 1.87 µg/kg of the patient\'s body weight.
    CONCLUSIONS: The optimum thyroxine replacement based on BSA or LBM is a more ideal method than based on BMI or body weight alone.
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  • 文章类型: Journal Article
    背景:糖基化是一种酶催化的翻译后修饰,其不同于糖基化,并且存在于大多数血浆蛋白上。N-糖基化发生在天冬酰胺残基上,主要在规范的N-糖基化基序(Asn-X-Ser/Thr)内,尽管也报道了非规范的N-糖基化基序Asn-X-Cys/Val。白蛋白是血浆中最丰富的蛋白质,其糖基化在糖尿病中得到了充分研究。然而,白蛋白长期以来一直被认为是一种非糖基化的蛋白质,由于缺乏规范的基序。白蛋白包含两个非规范的N-糖基化基序,其中一个最近被报道为糖基化的。
    方法:我们富集了丰富的血清蛋白,以研究其N-连接糖基化,然后通过大小排阻或混合模式阴离子交换色谱进行胰蛋白酶消化和糖肽富集。通过富集糖肽的液相色谱-串联质谱(LC-MS/MS)评估了规范和非规范位点的糖基化。进行去糖基化分析以确认在非规范位点的N-连接糖基化。白蛋白衍生的糖肽被MS3片段化以确认连接的聚糖。对另外20个样品进行平行反应监测以验证这些发现。通过LC-MS/MS类似地分析牛和兔白蛋白衍生的糖肽。
    结果:人白蛋白在两个非规范位点被N-糖基化,Asn68和Asn123。在带有四个复杂唾液酸化聚糖的两个位点检测到N-糖肽,并通过基于MS3的片段化和去糖基化研究进行验证。靶向质谱证实了20个另外的供体样品中的糖基化。最后,还发现牛和兔血清白蛋白中高度保守的Asn123被糖基化。
    结论:白蛋白是一种具有保守的N-连接糖基化位点的糖蛋白,可能具有潜在的临床应用。
    BACKGROUND: Glycosylation is an enzyme-catalyzed post-translational modification that is distinct from glycation and is present on a majority of plasma proteins. N-glycosylation occurs on asparagine residues predominantly within canonical N-glycosylation motifs (Asn-X-Ser/Thr) although non-canonical N-glycosylation motifs Asn-X-Cys/Val have also been reported. Albumin is the most abundant protein in plasma whose glycation is well-studied in diabetes mellitus. However, albumin has long been considered a non-glycosylated protein due to absence of canonical motifs. Albumin contains two non-canonical N-glycosylation motifs, of which one was recently reported to be glycosylated.
    METHODS: We enriched abundant serum proteins to investigate their N-linked glycosylation followed by trypsin digestion and glycopeptide enrichment by size-exclusion or mixed-mode anion-exchange chromatography. Glycosylation at canonical as well as non-canonical sites was evaluated by liquid chromatography-tandem mass spectrometry (LC-MS/MS) of enriched glycopeptides. Deglycosylation analysis was performed to confirm N-linked glycosylation at non-canonical sites. Albumin-derived glycopeptides were fragmented by MS3 to confirm attached glycans. Parallel reaction monitoring was carried out on twenty additional samples to validate these findings. Bovine and rabbit albumin-derived glycopeptides were similarly analyzed by LC-MS/MS.
    RESULTS: Human albumin is N-glycosylated at two non-canonical sites, Asn68 and Asn123. N-glycopeptides were detected at both sites bearing four complex sialylated glycans and validated by MS3-based fragmentation and deglycosylation studies. Targeted mass spectrometry confirmed glycosylation in twenty additional donor samples. Finally, the highly conserved Asn123 in bovine and rabbit serum albumin was also found to be glycosylated.
    CONCLUSIONS: Albumin is a glycoprotein with conserved N-linked glycosylation sites that could have potential clinical applications.
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  • 文章类型: Journal Article
    小白菜的两个重要性状,节间长度和出芽时间,在营养生长阶段破坏莲座叶的维持,并在生殖生长阶段影响开花。节间因其对水稻抗倒伏性的影响而备受关注和研究,但很少在大白菜中研究它们。在大白菜中,节间伸长不仅影响莲座叶的维持,而且影响抽苔和产量。出芽也是大白菜进入生殖生长的重要特征。尽管许多研究报道了开花和抽苔,关于芽出芽和出芽时机的研究很少。在这项研究中,EMS(甲磺酸乙酯)诱导的突变体lcc用于研究幼苗期的节间伸长和出芽期的后期出芽。通过比较突变体lcc和野生型A03的基因表达模式,在苗期鉴定出2280个差异表达基因,在萌芽早期鉴定出714个差异表达基因,在萌芽阶段鉴定出1052个差异表达基因。这里,研究了植物激素信号和时钟节律通路中基因的转录表达模式与大白菜节间伸长和出芽的调控关系。此外,用突变体lcc和R500构建F2种群。创建了具有1602标记基因座的高密度遗传图谱,确定了节间长度和出芽时间的QTL。具体来说,获得了五个节间长度的QTL和五个出芽时间的QTL。根据转录组数据分析,鉴定了节间长度候选基因BraA02g005840.3C(PIN8)和出芽时间候选基因BraA02g003870.3C(HY5-1)和BraA02g005190.3C(CHS-1)。这些发现为大白菜节间长度和出芽时间的调节提供了见解。
    Two important traits of Chinese cabbage, internode length and budding time, destroy the maintenance of rosette leaves in the vegetative growth stage and affect flowering in the reproductive growth stage. Internodes have received much attention and research in rice due to their effect on lodging resistance, but they are rarely studied in Chinese cabbage. In Chinese cabbage, internode elongation affects not only the maintenance of rosette leaves but also bolting and yield. Budding is also an important characteristic of Chinese cabbage entering reproductive growth. Although many studies have reported on flowering and bolting, studies on bud emergence and the timing of budding are scarce. In this study, the mutant lcc induced by EMS (Ethyl Methane Sulfonate) was used to study internode elongation in the seedling stage and late budding in the budding stage. By comparing the gene expression patterns of mutant lcc and wild-type A03, 2280 differentially expressed genes were identified in the seedling stage, 714 differentially expressed genes were identified in the early budding stage, and 1052 differentially expressed genes were identified in the budding stage. Here, the transcript expression patterns of genes in the plant hormone signaling and clock rhythm pathways were investigated in relation to the regulation of internode elongation and budding in Chinese cabbage. In addition, an F2 population was constructed with the mutants lcc and R500. A high-density genetic map with 1602 marker loci was created, and QTLs for internode length and budding time were identified. Specifically, five QTLs for internode length and five QTLs for budding time were obtained. According to transcriptome data analysis, the internode length candidate gene BraA02g005840.3C (PIN8) and budding time candidate genes BraA02g003870.3C (HY5-1) and BraA02g005190.3C (CHS-1) were identified. These findings provide insight into the regulation of internode length and budding time in Chinese cabbage.
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