taphonomy

taphonomy
  • 文章类型: Journal Article
    许多昆虫化石显示出单色图案,可以为古代昆虫的行为和生态提供有价值的见解。这些图案是否反映了原始的色素着色,然而,未知,其形成机制尚未得到研究。这里,我们对具有基于黑色素的颜色图案的现存甲虫进行了热成熟实验。扫描电子显微镜显示,富含黑色素的角质层比富含黑色素的角质层更能抵抗降解:随着逐渐成熟,黑色素贫乏的角质层区域经历优先变薄和损失,然而富含黑色素的角质层仍然存在。具有单调颜色图案的化石昆虫的比较分析证实,色调的变化对应于保留的角质层厚度的变化。因此,这些保留的颜色图案可以合理地解释为基于黑色素的图案。识别化石昆虫中基于黑色素的颜色模式为解释深度时间昆虫颜色和行为的演变开辟了新途径。
    Many fossil insects show monochromatic colour patterns that may provide valuable insights into ancient insect behaviour and ecology. Whether these patterns reflect original pigmentary coloration is, however, unknown, and their formation mechanism has not been investigated. Here, we performed thermal maturation experiments on extant beetles with melanin-based colour patterns. Scanning electron microscopy reveals that melanin-rich cuticle is more resistant to degradation than melanin-poor cuticle: with progressive maturation, melanin-poor cuticle regions experience preferential thinning and loss, yet melanin-rich cuticle remains. Comparative analysis of fossil insects with monotonal colour patterns confirms that the variations in tone correspond to variations in preserved cuticle thickness. These preserved colour patterns can thus be plausibly explained as melanin-based patterning. Recognition of melanin-based colour patterns in fossil insects opens new avenues for interpreting the evolution of insect coloration and behaviour through deep time.
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  • 文章类型: Journal Article
    化石的出色保存通常归因于细菌的作用,这些细菌有助于保存通常会迅速腐烂的软组织。然而,众所周知,真菌在有机物分解中起主要作用,元素的生物地球化学循环,和现代生态系统中的金属矿物转化。尽管真菌化石记录可以追溯到十亿多年前,只有少数记录的真菌在化石中的作用。在这项研究中,我们对早期更新世鬣狗(化石粪便)进行了详细的地质生物学调查,试图确定真菌可能参与其形成。使用先进的微观和矿物学方法,我们发现许多羟基磷灰石纳米纤维(平均25-34nm),交织形成球形结构,除了食物残骸外,还构成了共prolites的基质。发现这些结构在质地和矿物质组成上与普通腐生和地球活性真菌的实验室培养过程中产生的生物矿物质极为相似。黑曲霉,在存在钙(Ca)和磷(P)的固体来源的情况下。这个观察,以及我们获得的其他数据,强烈表明真菌代谢可以提供一种可以导致化石生物矿化的机制,我们假设,因此,这可能有助于在地质记录中形成保存完好的化石(Lagerstätten)。特有的多晶纳米纤维也可能是早期地球和外星环境中真菌生命的潜在生物特征。
    Exceptional preservation of fossils has often been attributed to the actions of bacteria that aid in the preservation of soft tissues that normally decay rapidly. However, it is well known that fungi play a major role in organic matter decomposition, biogeochemical cycling of elements, and metal-mineral transformations in modern ecosystems. Although the fungal fossil record can be traced back over a billion years, there are only a few recorded examples of fungal roles in fossilization. In this research, we have carried out a detailed geobiological investigation on early Pleistocene hyena coprolites (fossilized dung) in an attempt to ascertain possible fungal involvement in their formation. Using an advanced microscopic and mineralogical approach, we found that numerous hydroxyapatite nanofibers (25-34 nm on average), interwoven to form spheroidal structures, constituted the matrix of the coprolites in addition to food remains. These structures were found to be extremely similar in texture and mineral composition to biominerals produced during laboratory culture of a common saprophytic and geoactive fungus, Aspergillus niger, in the presence of a solid source of calcium (Ca) and phosphorus (P). This observation, and our other data obtained, strongly suggests that fungal metabolism can provide a mechanism that can result in fossil biomineralization, and we hypothesize, therefore, that this may have contributed to the formation of well-preserved fossils (Lagerstätten) in the geological record. The characteristic polycrystalline nanofibers may also have served as a potential biosignature for fungal life in early Earth and extraterrestrial environments.
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  • 文章类型: Video-Audio Media
    古神经解剖学是古生物学研究的新兴子领域,具有研究进化的巨大潜力。然而,化石神经组织的解释是一项艰巨的任务,目前缺乏严格的方法。我们在这里批判性地回顾了在寒武纪节肢动物中报道的神经组织保存的案例,遵循一套基本的古生物学标准来识别它们。这些标准基于各种解剖学参数,并考虑了形态解剖学的复杂性。这些标准的应用表明,化石神经组织的确凿证据比以前报道的要少。我们在这里综合了有更有力支持的证据。我们认为血管系统,尤其是它的空洞,可能是理解寒武纪节肢动物已知的许多肠道化石特征的核心。总之,我们的结果表明,在解释化石神经组织的证据时需要谨慎,这将提高进化场景的准确性。
    Paleoneuranatomy is an emerging subfield of paleontological research with great potential for the study of evolution. However, the interpretation of fossilized nervous tissues is a difficult task and presently lacks a rigorous methodology. We critically review here cases of neural tissue preservation reported in Cambrian arthropods, following a set of fundamental paleontological criteria for their recognition. These criteria are based on a variety of taphonomic parameters and account for morphoanatomical complexity. Application of these criteria shows that firm evidence for fossilized nervous tissues is less abundant and detailed than previously reported, and we synthesize here evidence that has stronger support. We argue that the vascular system, and in particular its lacunae, may be central to the understanding of many of the fossilized peri-intestinal features known across Cambrian arthropods. In conclusion, our results suggest the need for caution in the interpretation of evidence for fossilized neural tissue, which will increase the accuracy of evolutionary scenarios. Also see the video abstract here: https://youtu.be/2_JlQepRTb0.
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  • 文章类型: Journal Article
    三峡地区早寒武纪(第四阶段)的新风岩标本,对湖北省西部地区进行了描述,并将其指定为东方多叶树。Doliutheca以两种分类模式保存:粉质泥岩中的铸模显示出总体形态和一些柔软部分,和钙质泥灰岩的内部霉菌,展示了海螺和管壳的新形态细节。SEM和Micro-CT分析表明,Doliutheca在由杆状管状元件组成的孔眼内部保留了发达的板状锁骨和主突。此观察结果以及the的独特的基数和圆锥形盾牌表明,Doliutheca可以放置在Paramicrocornidae科内,最近成立的一组与hyolithids密切相关的hyoliths。
    New hyolith specimens from the early Cambrian (Stage 4) of the Three Gorges area, western Hubei Province are described and assigned to the species Doliutheca orientalis. Doliutheca are preserved in two taphonomic modes: casts in silty mudstone revealing gross morphology and some soft parts, and internal molds in calcareous pelites, which exhibit new morphological details of the conch and operculum. SEM and Micro-CT analyses show that Doliutheca preserve well-developed platy clavicles and cardinal processes on the interior of the operculum composed of rod-shaped tubular elements. This observation and the distinct cardinal and conical shields of the operculum indicate that Doliutheca could be placed within the Family Paramicrocornidae, most recently established as a group of hyoliths closely related to hyolithids.
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  • 文章类型: Journal Article
    The record of immature insects from the non-marine Purbeck and Wealden groups (Lower Cretaceous) of southern England is reviewed and expanded. Fossils of adult terrestrial insects are locally common, but terrestrial immature remains are restricted to transported hemipterans, most of which are sessile nymphs or puparia resembling those of extant whiteflies (Aleyrodidae). Remains of immature aquatic insects are more diverse and comprise the extant orders Plecoptera, Ephemeroptera, Odonata, Trichoptera, Hemiptera and Diptera. The Trichoptera are represented by larval cases constructed from a variety of materials corresponding to several ichnogenera. The Wealden immature insects were preserved in predominantly freshwater fluvial settings, whereas the Purbeck ones occur in lagoonal palaeoenvironments, ranging in salinity from brackish to hypersaline. The composition of aquatic immature insect faunas in the latter offers potential for palaeosalinity analysis, although there are complicating factors relating to habitat stability. Uncommon trace fossils such as beetle borings in wood provide evidence of immature insects not represented by body fossils.
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  • 文章类型: Journal Article
    Burmese Cretaceous amber (∼99 Ma, Myanmar) is famous for the preservation of a wide range of fauna and flora, including representatives of marine, freshwater and terrestrial groups. Here, we report on three ostracod specimens, that came visible as syninclusions to an aquatic isopod. The three specimens represent three different taxa, that were found preserved in a single piece of amber. One of the described specimens was studied using µCT scanning data. On the basis of general carapace morphology we assign all three to the group Podocopida, and (tentatively) its ingroup Cypridocopina. A lack of visibility of more particular diagnostic features such as adductor muscle scars and details of the marginal zone precludes a further identification, but we discuss possible affinities with either the marine-brackish group Pontocypridoidea or the non-marine group Cypridoidea. The taphonomy indicates that the studied ostracods had been subject to limited (if any) post-mortem transport, which could be consistent with marginal marine environments.
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  • 文章类型: Journal Article
    The challenge of identifying fossilized organelles has long hampered attempts to interpret the fossil record of early eukaryote evolution. We explore this challenge through experimental taphonomy of nuclei in a living eukaryote and microscale physical and chemical characterization of putative nuclei in embryo-like fossils from the early Ediacaran Weng\'an Biota. The fossil nuclei exhibit diverse preservational modes that differ in shape, presence or absence of an inner body and the chemistry of the associated mineralization. The nuclei are not directly fossilized; rather, they manifest as external moulds. Experimental taphonomy of epidermal cells from the common onion (Allium cepa) demonstrates that nuclei are more decay resistant than their host cells, generally maintaining their physical dimensions for weeks to months post-mortem, though under some experimental conditions they exhibit shrinkage and/or become shrouded in microbial biofilms. The fossil and experimental evidence may be rationalized in a single taphonomic pathway of selective mineralization of the cell cytoplasm, preserving an external mould of the nucleus that is itself resistant to both decay and mineral replication. Combined, our results provide both a secure identification of the Weng\'an nuclei as well as the potential of a fossil record of organelles that might help arbitrate in long-standing debates over the relative and absolute timing of the evolutionary assembly of eukaryote-grade cells.
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  • 文章类型: Journal Article
    Structural colours, nature\'s most pure and intense colours, originate when light is scattered via nanoscale modulations of the refractive index. Original colours in fossils illuminate the ecological interactions among extinct organisms and functional evolution of colours. Here, we report multiple examples of vivid metallic colours in diverse insects from mid-Cretaceous amber. Scanning and transmission electron microscopy revealed a smooth outer surface and five alternating electron-dense and electron-lucent layers in the epicuticle of a fossil wasp, suggesting that multilayer reflectors, the most common biophotonic nanostructure in animals and even plants, are responsible for the exceptional preservation of colour in amber fossils. Based on theoretical modelling of the reflectance spectra, a reflective peak of wavelength of 514 nm was calculated, corresponding to the bluish-green colour observed under white light. The green to blue structural colours in fossil wasps, beetles and a fly most likely functioned as camouflage, although other functions such as thermoregulation cannot be ruled out. This discovery not only provides critical evidence of evolution of structural colours in arthropods, but also sheds light on the preservation potential of nanostructures of ancient animals through geological time.
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  • 文章类型: Journal Article
    在几种羊膜动物谱系的化石外皮附属物中发现了保留的黑色素色素(鱼类,青蛙,蛇,海洋爬行动物,非鸟类恐龙,鸟,和哺乳动物)从全球各地的lagerstätten发掘。黑化是这些化石中有机外皮保存的主要因素。现存的脊椎动物中的黑色素通常储存在棒状到球形中,溶酶体衍生的,膜结合的囊泡称为黑色素体。黑色,深棕色,灰色是由真黑素产生的,和红棕色是由phaeomelanin产生的。黑色素的特定形态类型和纳米结构排列及其与角质附肢中角蛋白基质的关系产生了所谓的“结构颜色”。重建古代动物的颜色图案为研究它们的生活开辟了一条令人兴奋的新途径,行为和生态。现代关系的形状,安排,鸟类黑色素体的大小,黑色素化学,和羽毛颜色已用于重建恐龙Anchiornis的孤立羽毛和羽毛的色调和颜色图案,中华翼龙,和Microraptor在开创古色彩重建领域的开创性论文中。从那以后,进一步的研究已经确定了反阴影伪装模式,并对这些灭绝动物的生态和行为进行了后续预测。然而,古色彩重建仍然是一个新生的领域,当前的方法具有进一步完善的巨大潜力,标准化,和扩张。这包括对可能保存在化石表皮中的非黑色素的详细研究。在现有的古色彩研究中,一个共同的问题是缺乏对不同证据的语境化以及当前使用的各种技术。为此,这篇综述集中在化石羊膜:(i)产生了一个总体框架,通过考虑各种色素的化学特征来适当地重建古颜色,色素囊泡的形态和局部排列,色素浓度,宏观颜色图案,和taphonomy;(ii)为颜色产生机制的演变提供背景背景;(iii)鼓励未来在古色彩重建方面的努力,特别是对研究较少的群体,例如非恐龙恐龙和非恐龙羊膜。
    Preserved melanin pigments have been discovered in fossilised integumentary appendages of several amniote lineages (fishes, frogs, snakes, marine reptiles, non-avialan dinosaurs, birds, and mammals) excavated from lagerstätten across the globe. Melanisation is a leading factor in organic integument preservation in these fossils. Melanin in extant vertebrates is typically stored in rod- to sphere-shaped, lysosome-derived, membrane-bound vesicles called melanosomes. Black, dark brown, and grey colours are produced by eumelanin, and reddish-brown colours are produced by phaeomelanin. Specific morphotypes and nanostructural arrangements of melanosomes and their relation to the keratin matrix in integumentary appendages create the so-called \'structural colours\'. Reconstruction of colour patterns in ancient animals has opened an exciting new avenue for studying their life, behaviour and ecology. Modern relationships between the shape, arrangement, and size of avian melanosomes, melanin chemistry, and feather colour have been applied to reconstruct the hues and colour patterns of isolated feathers and plumages of the dinosaurs Anchiornis, Sinosauropteryx, and Microraptor in seminal papers that initiated the field of palaeocolour reconstruction. Since then, further research has identified countershading camouflage patterns, and informed subsequent predictions on the ecology and behaviour of these extinct animals. However, palaeocolour reconstruction remains a nascent field, and current approaches have considerable potential for further refinement, standardisation, and expansion. This includes detailed study of non-melanic pigments that might be preserved in fossilised integuments. A common issue among existing palaeocolour studies is the lack of contextualisation of different lines of evidence and the wide variety of techniques currently employed. To that end, this review focused on fossil amniotes: (i) produces an overarching framework that appropriately reconstructs palaeocolour by accounting for the chemical signatures of various pigments, morphology and local arrangement of pigment-bearing vesicles, pigment concentration, macroscopic colour patterns, and taphonomy; (ii) provides background context for the evolution of colour-producing mechanisms; and (iii) encourages future efforts in palaeocolour reconstructions particularly of less-studied groups such as non-dinosaur archosaurs and non-archosaur amniotes.
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  • 文章类型: Journal Article
    微生物生命渗透到地球的临界区,并可能在沉积岩记录开始之前就居住在我们星球的几乎所有表面和地下附近。鉴于地球充满生命的漫长时间,天体生物学家是否真正了解生物过程未触及的地质特征会是什么样子?在寻找宇宙中的外星生命时,确定什么构成了跨多个尺度的生物特征至关重要,以及这与由非生命过程形成的“形象签名”相比如何。制定非生物和生物特征的标准将为不同数据类型和观察时间范围的比较提供定量指标。生命检测的证据分为三类生物特征:(1)物质,比如元素丰度,同位素,分子,同素异形体,对映体,矿物,及其关联属性;(2)作为物理特征的对象,如垫子,化石包括痕迹化石和微生物岩(叠层石),和凝结;和(3)模式,如物理或化学现象的物理三维或概念n维关系,包括有机同系物的分子间丰度模式,以及化合物之间和化合物内部稳定同位素丰度的模式。需要天体生物学社区未来探索的五个关键挑战包括:(1)在“正确”的空间尺度上检查现象,因为如果不在该特定尺度上使用适当的仪器或建模方法进行检查,生物特征可能会使我们望而却步;(2)识别跨多个时空尺度的精确背景,以了解有形生物特征如何保留;(3)提高挖掘大数据集以揭示关系的能力,例如,地球的矿物多样性如何与生命一起进化;(4)利用网络基础设施进行生物特征类型的数据管理,特点,和分类;(5)使用生物和非生物模型的三维到n-D表示叠加在多个重叠的时空关系上,以提供新的见解。
    Microbial life permeates Earth\'s critical zone and has likely inhabited nearly all our planet\'s surface and near subsurface since before the beginning of the sedimentary rock record. Given the vast time that Earth has been teeming with life, do astrobiologists truly understand what geological features untouched by biological processes would look like? In the search for extraterrestrial life in the Universe, it is critical to determine what constitutes a biosignature across multiple scales, and how this compares with \"abiosignatures\" formed by nonliving processes. Developing standards for abiotic and biotic characteristics would provide quantitative metrics for comparison across different data types and observational time frames. The evidence for life detection falls into three categories of biosignatures: (1) substances, such as elemental abundances, isotopes, molecules, allotropes, enantiomers, minerals, and their associated properties; (2) objects that are physical features such as mats, fossils including trace-fossils and microbialites (stromatolites), and concretions; and (3) patterns, such as physical three-dimensional or conceptual n-dimensional relationships of physical or chemical phenomena, including patterns of intermolecular abundances of organic homologues, and patterns of stable isotopic abundances between and within compounds. Five key challenges that warrant future exploration by the astrobiology community include the following: (1) examining phenomena at the \"right\" spatial scales because biosignatures may elude us if not examined with the appropriate instrumentation or modeling approach at that specific scale; (2) identifying the precise context across multiple spatial and temporal scales to understand how tangible biosignatures may or may not be preserved; (3) increasing capability to mine big data sets to reveal relationships, for example, how Earth\'s mineral diversity may have evolved in conjunction with life; (4) leveraging cyberinfrastructure for data management of biosignature types, characteristics, and classifications; and (5) using three-dimensional to n-D representations of biotic and abiotic models overlain on multiple overlapping spatial and temporal relationships to provide new insights.
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