pathogen transmission

病原体传播
  • 文章类型: Journal Article
    变形虫-细菌相互作用在自然生态系统和工程环境中都很普遍。变形虫,作为重要的消费者,在生态系统中具有重要的生态重要性。此外,它们可以与细菌建立稳定的共生关系。铜通过杀死或限制吞噬体中摄入的细菌的生长,在变形虫的捕食中起着至关重要的作用。然而,某些共生细菌已经进化了在吞噬体液泡中持续存在的机制,逃避抗菌防御。尽管有这些见解,铜对变形虫和细菌之间共生关系的影响仍然知之甚少。在这项研究中,我们研究了铜胁迫对变形虫的影响及其与细菌的共生关系。我们的发现表明,铜浓度升高会对变形虫的生长产生不利影响,并改变细胞命运。共生类型显著影响共生关系对铜胁迫的响应。有益共生体在铜应力下保持稳定,但是寄生共生体表现出变形虫的定殖增强。此外,铜胁迫有利于变形虫和有益共生体之间的共生关系向宿主的利益转变。相反,在铜胁迫下,寄生共生体对宿主的致病作用加剧。本研究揭示了土壤变形虫和变形虫-细菌共生系统对铜胁迫的复杂响应机制。为非生物因素下的共生动力学提供新的见解。此外,结果强调了铜在环境中积累对病原体传播和生物安全的潜在风险。
    Amoeba-bacteria interactions are prevalent in both natural ecosystems and engineered environments. Amoebae, as essential consumers, hold significant ecological importance within ecosystems. Besides, they can establish stable symbiotic associations with bacteria. Copper plays a critical role in amoeba predation by either killing or restricting the growth of ingested bacteria in phagosomes. However, certain symbiotic bacteria have evolved mechanisms to persist within the phagosomal vacuole, evading antimicrobial defenses. Despite these insights, the impact of copper on the symbiotic relationships between amoebae and bacteria remains poorly understood. In this study, we investigated the effects of copper stress on amoebae and their symbiotic relationships with bacteria. Our findings revealed that elevated copper concentration adversely affected amoeba growth and altered cellular fate. Symbiont type significantly influenced the responses of the symbiotic relationships to copper stress. Beneficial symbionts maintained stability under copper stress, but parasitic symbionts exhibited enhanced colonization of amoebae. Furthermore, copper stress favored the transition of symbiotic relationships between amoebae and beneficial symbionts toward the host\'s benefit. Conversely, the pathogenic effects of parasitic symbionts on hosts were exacerbated under copper stress. This study sheds light on the intricate response mechanisms of soil amoebae and amoeba-bacteria symbiotic systems to copper stress, providing new insights into symbiotic dynamics under abiotic factors. Additionally, the results underscore the potential risks of copper accumulation in the environment for pathogen transmission and biosafety.
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  • 文章类型: Editorial
    自然,地理障碍在历史上限制了传染病的传播。在当今相互联系的世界中,情况已不再如此,伴随着前所未有的环境和气候变化,强调进化生物学的交叉点,流行病学和地理学(即生物地理学)。题为“地理与健康:人类易位和获得护理的作用”的特刊共14篇文章,文件增加了疾病的疾病传播,比如疟疾,利什曼病,血吸虫病,尽管进行了时空监测,但COVID-19(严重急性呼吸综合征电晕2)和Oropouche热。高分辨率卫星图像可用于了解传播风险和疾病传播的空间分布,并强调增加人畜共患病的发病率和地理范围的主要途径,这些人畜共患病是冠状病毒从蝙蝠溢出传播到猪或果子奶的传播。气候变化和全球化增加了侵入性蚊子在非热带地区的传播和建立,导致新出现的感染爆发,需要改善身体,化学和生物媒介控制策略。病原体及其载体的易位与人类的流动性密切相关,移民和全球货物运输。其他促成因素是森林砍伐和城市化侵蚀野生动物区。自然生态系统的破坏,再加上低收入和社会经济地位,增加被忽视的热带和人畜共患疾病的传播概率。本期特刊中的文章记录了新出现或重新出现的疾病以及发烧症状的监测。健康公平与医疗保健的可及性和医疗保健资源的针对性密切相关,需要空间方法。公共卫生包括整合空间监视系统的成功疾病管理,包括获得卫生设施。引起的抗菌素耐药性,例如,在健康中增加使用抗生素,农业和水产养殖,或者获得抗性基因,可以通过水平基因转移传播。这篇社论回顾了这篇14篇特刊的主要发现,确定了与我们相互联系的世界相关的重要差距,并提出了一些具体建议,以减轻后COVID-19大流行时代传染病的传播风险。
    Natural, geographical barriers have historically limited the spread of communicable diseases. This is no longer the case in today\'s interconnected world, paired with its unprecedented environmental and climate change, emphasising the intersection of evolutionary biology, epidemiology and geography (i.e. biogeography). A total of 14 articles of the special issue entitled \"Geography and health: role of human translocation and access to care\" document enhanced disease transmission of diseases, such as malaria, leishmaniasis, schistosomiasis, COVID-19 (Severe acute respiratory syndrome corona 2) and Oropouche fever in spite of spatiotemporal surveillance. High-resolution satellite images can be used to understand spatial distributions of transmission risks and disease spread and to highlight the major avenue increasing the incidence and geographic range of zoonoses represented by spill-over transmission of coronaviruses from bats to pigs or civets. Climate change and globalization have increased the spread and establishment of invasive mosquitoes in non-tropical areas leading to emerging outbreaks of infections warranting improved physical, chemical and biological vector control strategies. The translocation of pathogens and their vectors is closely connected with human mobility, migration and the global transport of goods. Other contributing factors are deforestation with urbanization encroaching into wildlife zones. The destruction of natural ecosystems, coupled with low income and socioeconomic status, increase transmission probability of neglected tropical and zoonotic diseases. The articles in this special issue document emerging or re-emerging diseases and surveillance of fever symptoms. Health equity is intricately connected to accessibility to health care and the targeting of healthcare resources, necessitating a spatial approach. Public health comprises successful disease management integrating spatial surveillance systems, including access to sanitation facilities. Antimicrobial resistance caused, e.g. by increased use of antibiotics in health, agriculture and aquaculture, or acquisition of resistance genes, can be spread by horizontal gene transfer. This editorial reviews the key findings of this 14-article special issue, identifies important gaps relevant to our interconnected world and makes a number of specific recommendations to mitigate the transmission risks of infectious diseases in the post-COVID-19 pandemic era.
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  • 文章类型: Review
    蚊媒疾病对人类健康构成重大威胁,随着新的蚊媒疾病爆发的可能性总是迫在眉睫。不幸的是,目前防治这些疾病的措施,如疫苗和药物,往往要么不可用,要么无效。然而,最近对微生物群的研究可能揭示了对抗这些疾病的有希望的策略。在这次审查中,我们研究了在了解蚊子和脊椎动物微生物对蚊子传播疾病的影响方面的最新进展。我们认为蚊子的微生物群会对这些疾病的传播产生直接和间接的影响,与蚊子共生的微生物,尤其是Wolbachia细菌,显示出控制蚊媒疾病的潜力。此外,脊椎动物的皮肤微生物群在蚊子偏好中起着重要作用,而肠道微生物组对人类蚊媒疾病的进展有影响。随着研究人员继续探索微生物在蚊媒疾病中的作用,我们强调了该领域的一些有希望的未来方向。最终,更好地了解蚊子之间的相互作用,他们的主人,病原体,蚊子和宿主的微生物群可能是预防和控制蚊子传播疾病的关键。
    Mosquito-borne diseases present a significant threat to human health, with the possibility of outbreaks of new mosquito-borne diseases always looming. Unfortunately, current measures to combat these diseases such as vaccines and drugs are often either unavailable or ineffective. However, recent studies on microbiomes may reveal promising strategies to fight these diseases. In this review, we examine recent advances in our understanding of the effects of both the mosquito and vertebrate microbiomes on mosquito-borne diseases. We argue that the mosquito microbiome can have direct and indirect impacts on the transmission of these diseases, with mosquito symbiotic microorganisms, particularly Wolbachia bacteria, showing potential for controlling mosquito-borne diseases. Moreover, the skin microbiome of vertebrates plays a significant role in mosquito preferences, while the gut microbiome has an impact on the progression of mosquito-borne diseases in humans. As researchers continue to explore the role of microbiomes in mosquito-borne diseases, we highlight some promising future directions for this field. Ultimately, a better understanding of the interplay between mosquitoes, their hosts, pathogens, and the microbiomes of mosquitoes and hosts may hold the key to preventing and controlling mosquito-borne diseases.
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  • 文章类型: Journal Article
    微嫁接,大约50年前开发的,长期以来一直被用于根除病毒,微传播,再生,嫩肤,和移植物相容性。最近,微嫁接已用于研究接穗和砧木之间分子的远距离运输和信号传导。专性植物病原体的嫁接性,如病毒,类病毒,和植物等离子体,促进了使用微移植来研究生物索引和病原体传播,病原体诱导的移植物不相容性,并在过去20年中筛选病原体抗性。本研究提供了有关后者的全面信息。最后,提出了指导进一步研究的前景。
    Micrografting, which was developed almost 50 years ago, has long been used for virus eradication, micropropagation, regeneration, rejuvenation, and graft compatibility. Recently, micrografting has been used for studies of long-distance trafficking and signaling of molecules between scions and rootstocks. The graft transmissiveness of obligate plant pathogens, such as viruses, viroids, and phytoplasmas, facilitated the use of micrografting to study biological indexing and pathogen transmission, pathogen-induced graft incompatibility, and screening for the pathogen resistance during the past 20 years. The present study provides comprehensive information on the latter subjects. Finally, prospects are proposed to direct further studies.
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  • 文章类型: Journal Article
    SARS-CoV-2等呼吸道病原体的传播取决于人群之间的接触和混合模式。了解这一点对于预测病原体传播和控制努力的有效性至关重要。迄今为止,大多数对接触模式的分析都集中在高收入环境上。
    这里,我们对在低收入和中等收入国家进行的调查进行了系统回顾和个体参与者荟萃分析,并将这些环境中的接触模式与以前在高收入国家进行的调查进行了比较.使用来自27项调查的28,503名参与者和413,069名联系人的个人数据,我们探索了接触特征(数量,location,持续时间,以及是否物理)因收入设置而异。
    在高收入和中高收入地区,接触率随着年龄的增长而下降,但不是在低收入环境中,65岁以上的成年人与年轻人接触的数量相似,并且与所有年龄组混合。在所有设置中,家庭规模的增加是接触频率和特征的关键决定因素,低收入环境的特点是最大的,大多数代际家庭。在低收入环境中,在家中进行接触的比例更高,工作/学校接触在高收入阶层更为频繁。我们还观察到不同收入阶层的性别对频率的对比影响,持续时间,以及个人接触的类型。
    环境之间接触模式的这些差异对呼吸道病原体的传播和不同非药物干预措施的有效性都有实质性影响。
    这项工作主要由英国医学研究委员会和DFID(MR/R015600/1)联合中心资助。
    传染病,特别是由SARS-CoV-2等空气传播的病原体引起的,通过社会接触传播,了解人们如何混合对于控制疫情至关重要。为了探索这些模式,研究人员通常进行大型接触调查。参与者被要求提供个人信息(如性别、年龄和职业),以及最近社会接触的细节,通常是在过去24小时内发生的。这些信息包括,接触者的年龄和性别,互动发生的地方,它持续了多长时间,以及它是否涉及身体接触。这些调查有助于科学家预测传染病可能如何传播。但有一个问题:大部分数据来自高收入国家,有证据表明,不同地方的社会接触模式不同。因此,来自这些国家的数据可能对预测感染在低收入地区的传播方式没有帮助.这里,Mousaetal.收集并合并了COVID-19大流行前进行的27次接触调查的数据,以了解高收入和低收入环境之间的基线社交互动如何变化。比较显示,在高收入国家,人们每天接触的数量随着年龄的增长而减少。但是,在低收入国家,年轻人和老年人的接触数量相似,并且与所有年龄组混合.在高收入国家,更多的接触发生在工作或学校,在低收入环境中,更多的互动发生在家里,人们也更有可能生活在更大的地方,代际家庭。Mousaetal.还发现性别影响接触的持续时间以及它们是否涉及身体接触,这两者都是传播空气病原体的关键风险因素。这些发现可以帮助研究人员预测传染病如何在不同的环境中传播。它们还可以用来评估非医疗限制的有效性,比如保护老年人和关闭工作场所,将减少世界不同地区的传输。
    Transmission of respiratory pathogens such as SARS-CoV-2 depends on patterns of contact and mixing across populations. Understanding this is crucial to predict pathogen spread and the effectiveness of control efforts. Most analyses of contact patterns to date have focused on high-income settings.
    Here, we conduct a systematic review and individual-participant meta-analysis of surveys carried out in low- and middle-income countries and compare patterns of contact in these settings to surveys previously carried out in high-income countries. Using individual-level data from 28,503 participants and 413,069 contacts across 27 surveys, we explored how contact characteristics (number, location, duration, and whether physical) vary across income settings.
    Contact rates declined with age in high- and upper-middle-income settings, but not in low-income settings, where adults aged 65+ made similar numbers of contacts as younger individuals and mixed with all age groups. Across all settings, increasing household size was a key determinant of contact frequency and characteristics, with low-income settings characterised by the largest, most intergenerational households. A higher proportion of contacts were made at home in low-income settings, and work/school contacts were more frequent in high-income strata. We also observed contrasting effects of gender across income strata on the frequency, duration, and type of contacts individuals made.
    These differences in contact patterns between settings have material consequences for both spread of respiratory pathogens and the effectiveness of different non-pharmaceutical interventions.
    This work is primarily being funded by joint Centre funding from the UK Medical Research Council and DFID (MR/R015600/1).
    Infectious diseases, particularly those caused by airborne pathogens like SARS-CoV-2, spread by social contact, and understanding how people mix is critical in controlling outbreaks. To explore these patterns, researchers typically carry out large contact surveys. Participants are asked for personal information (such as gender, age and occupation), as well as details of recent social contacts, usually those that happened in the last 24 hours. This information includes, the age and gender of the contact, where the interaction happened, how long it lasted, and whether it involved physical touch. These kinds of surveys help scientists to predict how infectious diseases might spread. But there is a problem: most of the data come from high-income countries, and there is evidence to suggest that social contact patterns differ between places. Therefore, data from these countries might not be useful for predicting how infections spread in lower-income regions. Here, Mousa et al. have collected and combined data from 27 contact surveys carried out before the COVID-19 pandemic to see how baseline social interactions vary between high- and lower-income settings. The comparison revealed that, in higher-income countries, the number of daily contacts people made decreased with age. But, in lower-income countries, younger and older individuals made similar numbers of contacts and mixed with all age groups. In higher-income countries, more contacts happened at work or school, while in low-income settings, more interactions happened at home and people were also more likely to live in larger, intergenerational households. Mousa et al. also found that gender affected how long contacts lasted and whether they involved physical contact, both of which are key risk factors for transmitting airborne pathogens. These findings can help researchers to predict how infectious diseases might spread in different settings. They can also be used to assess how effective non-medical restrictions, like shielding of the elderly and workplace closures, will be at reducing transmissions in different parts of the world.
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  • 文章类型: Journal Article
    Time-variant positive air pressure in a drainage stack poses a risk of pathogenic virus transmission into a habitable space, however, the excessive risk and its significance have not yet been sufficiently addressed for drainage system designs. This study proposes a novel measure for the probable pathogenic virus transmission risk of a high-rise drainage stack with the occurrence of positive air pressure. The proposed approach is based on time-variant positive air pressures measured in a 38 m high drainage stack of a full-scale experimental tower under steady flow conditions of flow rate 1-4 Ls-1 discharging at a height between 15 m to 33 m above the stack base. The maximum pressure and probabilistic positive air pressures in the discharging stack ventilation section with no water (Zone A of the discharging drainage stack) were determined. It was demonstrated that the positive air pressures were lower in frequency as compared with those in other stack zones and could propagate along the upper 1/3 portion of the ventilation pipe (H\' ≥ 0.63) towards the ventilation opening at the rooftop. As the probabilistic positive pressures at a stack height were found to be related to the water discharging height and flow rate, a risk model of positive air pressure is proposed. Taking the 119th, 124th, 140th and 11,547th COVID-19 cases of an epidemiological investigation in Hong Kong as a baseline of concern, excessive risk of system overuse was evaluated. The results showed that for a 20-80% increase in the frequency of discharge flow rate, the number of floors identified at risk increased from 1 to 9 and 1 to 6 in the 34- and 25-storey residential buildings, respectively. The outcome can apply to facilities planning for self-quarantine arrangements in high-rise buildings where pathogenic virus transmission associated with drainage system overuse is a concern.
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  • 文章类型: Journal Article
    感染性病原体在各种环境中的传播机制具有很大的复杂性,一直受到许多研究人员的关注。作为一种经济有效且功能强大的方法,计算流体力学(CFD)在数值求解环境流体力学中起着重要作用。此外,随着计算机科学的发展,越来越多的研究人员开始使用CFD方法分析病原体传播。本文以COVID-19的影响为灵感,总结了基于CFD方法的不同模型和算法的病原体传播研究工作。在CFD模拟中将病原体定义为颗粒或气体是一种常见的方法,并且在一些研究中使用了流行病模型来提高计算的真实性。尽管描述病原体的物理特征并不难,如何描述其生物学特性仍是CFD模拟中的一大挑战。一系列调查分析了不同环境中病原体的传播(医院,教学楼,等)证明了气流对病原体传播的影响,并强调了合理通风的重要性。最后,这篇综述提出了三种先进的方法:LBM方法,多孔介质法,和基于Web的预测方法。尽管本综述中提到的CFD方法可能无法缓解当前的大流行情况,它帮助研究人员了解病毒和细菌等病原体的传播机制,并为降低流行或大流行情况下的感染风险提供指导。
    Transmission mechanics of infectious pathogen in various environments are of great complexity and has always been attracting many researchers\' attention. As a cost-effective and powerful method, Computational Fluid Dynamics (CFD) plays an important role in numerically solving environmental fluid mechanics. Besides, with the development of computer science, an increasing number of researchers start to analyze pathogen transmission by using CFD methods. Inspired by the impact of COVID-19, this review summarizes research works of pathogen transmission based on CFD methods with different models and algorithms. Defining the pathogen as the particle or gaseous in CFD simulation is a common method and epidemic models are used in some investigations to rise the authenticity of calculation. Although it is not so difficult to describe the physical characteristics of pathogens, how to describe the biological characteristics of it is still a big challenge in the CFD simulation. A series of investigations which analyzed pathogen transmission in different environments (hospital, teaching building, etc) demonstrated the effect of airflow on pathogen transmission and emphasized the importance of reasonable ventilation. Finally, this review presented three advanced methods: LBM method, Porous Media method, and Web-based forecasting method. Although CFD methods mentioned in this review may not alleviate the current pandemic situation, it helps researchers realize the transmission mechanisms of pathogens like viruses and bacteria and provides guidelines for reducing infection risk in epidemic or pandemic situations.
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  • 文章类型: Journal Article
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