TOX

TOX
  • 文章类型: Journal Article
    背景:胸腺细胞选择相关的HMG-BOX(TOX)属于一个转录因子家族,其中含有高迁移率基团盒(HMG-Box)的高度保守区域。越来越多的研究表明,TOX参与肿瘤的发生和发展,促进T细胞衰竭。我们用癌症基因组图谱(TCGA)癌症数据评估了TOX的作用。
    方法:用来自TCGA和基因型-组织表达(GTEx)数据库的RNA-seq数据检测TOX表达。使用数据库分析TOX的遗传改变状态和蛋白质水平,包括人类蛋白质图谱(HPA),GeneCards,和字符串。用TCGA的生存数据估计预后意义。此外,采用R软件对TOX进行富集分析。用肿瘤免疫评估资源(TIMER)2.0数据库和“CIBERSORT”方法评估TOX与免疫细胞浸润之间的关系。进一步探讨了TOX与免疫检查点之间的相关性。免疫组织化学分析进一步验证癌组织和癌旁组织中TOX表达的差异,并且使用CCK-8测定评估细胞活力。
    结果:在TCGA队列中的大多数癌症类型中,观察到差异TOX表达。检测TOX基因改变状态和蛋白水平,癌症的预后与TOX表达相关。此外,TOX水平与不同的免疫相关途径密切相关,免疫细胞浸润和免疫检查点。此外,验证了几种癌组织和癌旁组织之间TOX表达的显着差异。此外,TOX明显影响癌细胞的活力。
    结论:TOX,一种潜在的癌症生物标志物,可能参与免疫微环境的调节,可用于新的靶向药物。
    BACKGROUND: Thymocyte selection-associated HMG-BOX (TOX) belongs to a family of transcription factors containing a highly conserved region of the high mobility group box (HMG-Box). A growing body of research has shown that TOX is involved in the occurrence and development of tumors and promotes T-cell exhaustion. We assessed the role of TOX with The Cancer Genome Atlas (TCGA) Pancancer Data.
    METHODS: TOX expression was examined with RNA-seq data from the TCGA and Genotype-Tissue Expression (GTEx) databases. The genetic alteration status and protein level of TOX were analyzed using databases, including the Human Protein Atlas (HPA), GeneCards, and STRING. The prognostic significance was estimated with survival data from the TCGA. Moreover, R software was used for enrichment analysis of TOX. The relationship between TOX and immune cell infiltration was assessed with the Tumor Immune Estimation Resource (TIMER) 2.0 database and the \"CIBERSORT\" method. The correlation between TOX and immune checkpoints was further explored. Immunohistochemical analysis was used to further verify the difference in TOX expression between cancerous and paracancerous tissues, and cell viability was evaluated using a CCK-8 assay.
    RESULTS: In most cancer types in the TCGA cohort, differential TOX expression was observed. The genetic alteration status and protein level of TOX were examined, and the prognosis of cancers was associated with TOX expression. Moreover, TOX levels were closely related to different immune-related pathways, immune cell infiltration and immune checkpoints. Additionally, significant differences in TOX expression between several cancerous and paracancerous tissues were validated. Furthermore, TOX clearly impacted the viability of cancer cells.
    CONCLUSIONS: TOX, a potential biomarker for cancer, may be involved in the regulation of the immune microenvironment and can be used for new targeted drugs.
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  • 文章类型: Journal Article
    免疫检查点阻断(ICB)的基本原理是保护肿瘤浸润性T细胞不被耗尽。尽管ICB治疗取得了显著的成功,只有一小部分患者从中受益。以多种抑制性受体表达的功能低下状态为特征,耗尽的T(Tex)细胞是改善ICB的主要障碍。T细胞耗竭是一个渐进的过程,适应慢性感染和癌症中持续的抗原刺激。在这次审查中,我们阐明了Tex细胞的异质性,并为T细胞耗竭的分级转录调控提供了新的见解。还总结了诱导和促进耗竭的因素和信号通路。此外,我们回顾了Tex细胞的表观遗传和代谢改变,并讨论了PD-1信号如何影响T细胞活化和耗尽之间的平衡,旨在为联合免疫疗法的应用提供更多的治疗靶点。
    The fundamental principle of immune checkpoint blockade (ICB) is to protect tumor-infiltrating T cells from being exhausted. Despite the remarkable success achieved by ICB treatment, only a small group of patients benefit from it. Characterized by a hypofunctional state with the expression of multiple inhibitory receptors, exhausted T (Tex) cells are a major obstacle in improving ICB. T cell exhaustion is a progressive process which adapts to persistent antigen stimulation in chronic infections and cancers. In this review, we elucidate the heterogeneity of Tex cells and offer new insights into the hierarchical transcriptional regulation of T cell exhaustion. Factors and signaling pathways that induce and promote exhaustion are also summarized. Moreover, we review the epigenetic and metabolic alterations of Tex cells and discuss how PD-1 signaling affects the balance between T cell activation and exhaustion, aiming to provide more therapeutic targets for applications of combinational immunotherapies.
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  • 文章类型: Journal Article
    原理:TOX是多种免疫细胞发育和淋巴结形成所需的DNA结合因子。然而,TOX对NK细胞发育和功能的时间调控模式有待进一步探讨。方法:探讨TOX在不同发育阶段NK细胞中的作用,我们在造血干细胞阶段删除了TOX(Vav-Cre),NK细胞前体(CD122-Cre)阶段和晚期NK细胞发育阶段(Ncr1-Cre),分别。流式细胞术检测TOX缺失时NK细胞的发育和功能变化。RNA-seq用于评估WT和TOX缺陷型NK细胞的转录表达谱的差异。利用公开的Chip-seq数据来搜索与NK细胞中的TOX直接相互作用的蛋白质。结果:造血干细胞阶段TOX的缺乏严重阻碍了NK细胞的发育。在较小程度上,TOX在NKp细胞分化为成熟NK细胞的生理过程中也起着重要作用。此外,在NKp阶段TOX的缺失严重损害了NK细胞的免疫监视功能,伴随着IFN-γ和CD107a表达的下调。然而,TOX对于成熟的NK细胞发育和功能是必不可少的。机械上,通过将RNA-seq数据与已发布的TOXChIP-seq数据相结合,我们发现TOX在NKp阶段的失活直接抑制了Hippo信号通路中重要的中间激酶Mst1的表达。在NKp阶段缺乏的Mst1获得了与Toxfl/flCD122Cre小鼠相似的表型。结论:在我们的研究中,我们得出结论,TOX通过维持Mst1的表达来协调NKp阶段早期小鼠NK细胞的发育。此外,我们阐明了转录因子TOX在NK细胞生物学中的不同依赖性。
    Rationale: TOX is a DNA-binding factor required for the development of multiple immune cells and the formation of lymph nodes. However, the temporal regulation mode of TOX on NK cell development and function needs to be further explored. Methods: To investigate the role of TOX in NK cells at distinct developmental phases, we deleted TOX at the hematopoietic stem cell stage (Vav-Cre), NK cell precursor (CD122-Cre) stage and late NK cell developmental stage (Ncr1-Cre), respectively. Flow cytometry was used to detect the development and functional changes of NK cell when deletion of TOX. RNA-seq was used to assess the differences in transcriptional expression profile of WT and TOX-deficient NK cells. Published Chip-seq data was exploited to search for the proteins directly interact with TOX in NK cells. Results: The deficiency of TOX at the hematopoietic stem cell stage severely retarded NK cell development. To a less extent, TOX also played an essential role in the physiological process of NKp cells differentiation into mature NK cells. Furthermore, the deletion of TOX at NKp stage severely impaired the immune surveillance function of NK cells, accompanied by down-regulation of IFN-γ and CD107a expression. However, TOX is dispensable for mature NK cell development and function. Mechanistically, by combining RNA-seq data with published TOX ChIP-seq data, we found that the inactivation of TOX at NKp stage directly repressed the expression of Mst1, an important intermediate kinase in Hippo signaling pathway. Mst1 deficient at NKp stage gained the similar phenotype with Toxfl/flCD122Cre mice. Conclusion: In our study, we conclude that TOX coordinates the early mouse NK cell development at NKp stage by maintaining the expression of Mst1. Moreover, we clarify the different dependence of the transcription factor TOX in NK cells biology.
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  • 文章类型: Journal Article
    胸腺细胞选择相关的高迁移率族盒蛋白(TOX)在所有T淋巴细胞发育阶段都有不同的表达。由于科学技术手段更加先进,包括单细胞测序技术,T淋巴细胞和TOX的异质性逐渐被揭示。对这种异质性的进一步探索将有助于我们更详细地了解T淋巴细胞的发育阶段和功能特征。新出现的证据支持它的监管不仅在耗尽,而且激活T淋巴细胞,从而验证TOX异质性。TOX不只可作为肿瘤疾病和慢性感染的潜伏干预靶点,和自身免疫性疾病的治疗策略,也是预测恶性肿瘤患者药物反应和总体生存的关键因素。
    Thymocyte selection-associated high mobility group box protein (TOX) is expressed differently at all T lymphocytes development stages. Owing to more advanced scientific and technological means, including single-cell sequencing technology, heterogeneity of T lymphocytes and TOX has gradually been revealed. Further exploration of such heterogeneity will help us comprehend the developmental stage and functional characteristics of T lymphocytes in greater detail. Emerging evidence supports its regulation not only in exhausting, but also in activating T lymphocytes, thereby verifying TOX heterogeneity. TOX can be used not only as a latent intervention target for tumor diseases and chronic infections, and a therapeutic strategy for autoimmune diseases, but also as a critical factor predicting the drug response and overall survival of patients with malignant tumors.
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  • 文章类型: Journal Article
    胸腺细胞选择相关高迁移率族盒蛋白(TOX)是调节T淋巴细胞发育和耗尽的重要分子。我们的目的是研究TOX在纯红细胞发育不全(PRCA)的免疫发病机理中的作用。流式细胞术检测PRCA患者外周血CD8+淋巴细胞TOX表达。此外,检测CD8+淋巴细胞免疫检查点分子PD1和LAG3以及细胞毒性分子穿孔素和颗粒酶B的表达.分析CD4+CD25+CD127lowT细胞的数量。PRCA患者CD8+T淋巴细胞上的TOX表达显著增加(40.73[公式:见正文]16.03vs.28.38[公式:见案文]12.20)。PCRA患者CD8+T淋巴细胞上PD1和LAG3的表达水平明显高于对照组(34.18[公式:见正文]13.26vs.21.76[公式:见案文]9.22和14.17[公式:见案文]13.74与7.24[公式:分别见文本]5.44)。PRCA患者CD8+T淋巴细胞中穿孔素和颗粒酶的水平分别为48.60[公式:见正文]19.02和46.66[公式:见正文]25.49,显着高于对照组(分别为31.46[公式:参见正文]7.82和16.17[公式:参见正文]4.84)。PRCA患者CD4+CD25+CD127lowTreg细胞数量显著减少(4.30[公式:见正文]1.27vs.1.75[公式:见正文]1.22)。在PRCA患者中,CD8+T细胞被激活并表现出TOX的过表达,PD1,LAG3,穿孔素,和颗粒酶B,而调节性T细胞减少。这些发现表明T细胞异常在PRCA的发病机理中起着至关重要的作用。
    Thymocyte selection-associated high-mobility group box protein (TOX) is an important molecule regulating the development and exhaustion of T lymphocytes. Our aim is to investigate the role of TOX in the immune pathogenesis of pure red cell aplasia (PRCA). TOX expression of CD8+ lymphocytes from the peripheral blood of patients with PRCA was detected by flow cytometry. Additionally, the expression of immune checkpoint molecules PD1 and LAG3 and cytotoxic molecules perforin and granzyme B of CD8+ lymphocytes was measured. The quantity of CD4+CD25+CD127low T cells was analyzed. TOX expression on CD8+ T lymphocytes in PRCA patients was significantly increased (40.73 [Formula: see text] 16.03 vs. 28.38 [Formula: see text] 12.20). The expression levels of PD1 and LAG3 on CD8+ T lymphocytes in PCRA patients were significantly higher than those in the control group (34.18 [Formula: see text] 13.26 vs. 21.76 [Formula: see text] 9.22 and 14.17 [Formula: see text] 13.74 vs. 7.24 [Formula: see text] 5.44, respectively). The levels of perforin and granzyme in CD8+ T lymphocytes of PRCA patients were 48.60 [Formula: see text] 19.02 and 46.66 [Formula: see text] 25.49, respectively, which were significantly higher than those of the control group (31.46 [Formula: see text] 7.82 and 16.17 [Formula: see text] 4.84, respectively). The number of CD4+CD25+CD127low Treg cells in PRCA patients was significantly decreased (4.30 [Formula: see text] 1.27 vs. 1.75 [Formula: see text] 1.22). In PRCA patients, CD8+ T cells were activated and exhibited overexpression of TOX, PD1, LAG3, perforin, and granzyme B, while regulatory T cells decreased. These findings suggest that T cell abnormality plays a critical role in the pathogenesis of PRCA.
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  • 文章类型: Journal Article
    背景:卵巢癌是最致命的妇科恶性肿瘤之一,预后不佳,对人类健康构成严重威胁,强调需要更多的知识来识别一些生物标志物以进行早期诊断,预测预后和疾病监测。TOX,一个关键的转录因子,与恶性肿瘤的发展有关,有助于淋巴细胞,而不仅仅是T细胞,已被证明在某些癌症中具有预后价值。这里,我们旨在研究TOX在卵巢癌预后中的作用.
    结果:我们发现TOX不仅在CD8T细胞中表达,而且在肿瘤细胞中也表达。卵巢癌组织中TOX表达得分较高,且与生存状态相关。生存分析显示,具有高TOX表达评分的卵巢癌患者总体生存时间和无病生存时间通常较短。单变量和多变量Cox证明TOX表达评分可作为卵巢癌患者的独立预后因素。
    结论:TOX在卵巢癌中的表达可能是预测卵巢癌患者总生存期的一个有前景的工具。
    BACKGROUND: Ovarian cancer is one of the most lethal gynecologic malignancies with a dismal prognosis that poses a serious threat to human health, highlighting the need for more knowledge about what is required for identifying some biomarkers for early diagnosis, prediction of prognosis and disease monitoring. TOX, a critical transcription factor related to the development of malignancies that contributing to lymphocytes not just T cells, had been proved prognostic value in some spectrum of cancers. Here, we aimed to study the prognostic role of TOX in ovarian cancer.
    RESULTS: We found that TOX was not only expressed in CD8 T cells but also tumor cells. TOX expression score was higher in ovarian cancer tissues and correlated with survival status. Survival analysis revealed that ovarian cancer patients with high TOX expression score generally shorter overall survival and disease-free survival times. Univariate and Multivariate Cox demonstrated that TOX expression score could be used as an independent prognostic factor for patients with ovarian cancer.
    CONCLUSIONS: TOX expression in ovarian cancer could be a promising tool for predict overall survival of ovarian cancer patients.
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  • 文章类型: Journal Article
    早期冠状动脉粥样硬化(ECA)的检测仍然是一个挑战,内皮功能障碍的机制仍不清楚。在本研究中,我们旨在鉴定内皮功能障碍中差异表达基因(DEGs)和miRNAs以及TFs的调控网络,以阐明ECA的可能发病机制并寻找新的潜在标志物.GEO数据库的GSE132651数据集用于生物信息学分析。主成分分析(PCA),DEG的识别,显著DEG之间的相关性分析,预测miRNA和转录因子(TFs)的调控网络,选定的显著DEG的验证,和受试者工作特征(ROC)曲线分析以及曲线下面积(AUC)值。我们鉴定了10个具有显著上调特征的基因和13个具有显著下调信号的基因。在此之后,我们发现,根据miRNA-靶基因调控网络,有22种miRNA可调节两个或更多DEGs.目标≥10的TFs为E2F1、RBPJ、SSX3、MMS19、POU3F3、HOXB5和KLF4。最后,三个显著的DEG(TOX,选择RasGRP3,TSPAN13)进行验证实验。我们的研究发现了TOX,RasGRP3和TSPAN13在功能失调的内皮中提供了潜在的生物标志物以及对ECA可能的分子机制的新见解。
    The detection of early coronary atherosclerosis (ECA) is still a challenge and the mechanism of endothelial dysfunction remains unclear. In the present study, we aimed to identify differentially expressed genes (DEGs) and the regulatory network of miRNAs as well as TFs in dysfunctional endothelium to elucidate the possible pathogenesis of ECA and find new potential markers. The GSE132651 data set of the GEO database was used for the bioinformatic analysis. Principal component analysis (PCA), the identification of DEGs, correlation analysis between significant DEGs, the prediction of regulatory networks of miRNA and transcription factors (TFs), the validation of the selected significant DEGs, and the receiver operating characteristic (ROC) curve analysis as well as area under the curve (AUC) values were performed. We identified ten genes with significantly upregulated signatures and thirteen genes with significantly downregulated signals. Following this, we found twenty-two miRNAs regulating two or more DEGs based on the miRNA-target gene regulatory network. TFs with targets ≥ 10 were E2F1, RBPJ, SSX3, MMS19, POU3F3, HOXB5, and KLF4. Finally, three significant DEGs (TOX, RasGRP3, TSPAN13) were selected to perform validation experiments. Our study identified TOX, RasGRP3, and TSPAN13 in dysfunctional endothelium and provided potential biomarkers as well as new insights into the possible molecular mechanisms of ECA.
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  • 文章类型: Journal Article
    αβ/γδ谱系的规格和髓样胸腺上皮细胞(mTECs)的成熟协调了对自身抗原的中心耐受性。然而,这一生物过程的潜在机制仍不清楚。这里,我们报告说,胸腺细胞中TOX的双阶段损失分级损害mTEC成熟,促进胸腺产生IL-17A的γδT细胞(Tγδ17)谱系承诺,并通过不同的机制导致致命的自身免疫性肝炎(AIH)的发展。从TOX缺陷小鼠转移γδT细胞可复制AIH。TOX与TCF1蛋白相互作用并稳定,以维持胸腺祖细胞中γδT细胞发育的平衡,和过表达的TCF1标准化αβ/γδ谱系规范和激活。此外,来自AIH患者的γδT细胞中TOX表达下调,并且与AIH诊断评分呈负相关。我们的发现表明TOX在涉及mTEC和Tγδ17发育的自身免疫控制中的多方面作用,并为AIH提供了潜在的诊断标志物。
    The specification of the αβ/γδ lineage and the maturation of medullary thymic epithelial cells (mTECs) coordinate central tolerance to self-antigens. However, the mechanisms underlying this biological process remain poorly clarified. Here, we report that dual-stage loss of TOX in thymocytes hierarchically impaired mTEC maturation, promoted thymic IL-17A-producing γδ T-cell (Tγδ17) lineage commitment, and led to the development of fatal autoimmune hepatitis (AIH) via different mechanisms. Transfer of γδ T cells from TOX-deficient mice reproduced AIH. TOX interacted with and stabilized the TCF1 protein to maintain the balance of γδ T-cell development in thymic progenitors, and overexpression of TCF1 normalized αβ/γδ lineage specification and activation. In addition, TOX expression was downregulated in γδ T cells from AIH patients and was inversely correlated with the AIH diagnostic score. Our findings suggest multifaceted roles of TOX in autoimmune control involving mTEC and Tγδ17 development and provide a potential diagnostic marker for AIH.
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  • 文章类型: Journal Article
    T细胞耗竭是减弱T细胞对肿瘤的细胞毒性的关键原因之一。在表达和表观遗传水平上,许多基因,包括转录因子TOX,被认为与调节T细胞耗竭有关。在本研究中,我们发现在NB患者中,耗尽的T细胞的比例,以PD-1和Tim-3上调为特征,增加。同时,抑制性表面受体的表达,包括Lag-3、CD160、VISTA和KLRG1也增加了,但这伴随着释放效应分子IL-2,IFN-γ,NB患者CD3+T细胞中的TNF-α和颗粒酶B。值得注意的是,NB来源的记忆T细胞(Tm)比其他T细胞表现出更明显的耗尽特征。此外,在我们的时程培养实验中,在体外TCR刺激下,NB患者的T细胞具有更高的耗竭转化潜力。在NB患者中,T细胞耗尽被证明与新鲜分选的CD3+T细胞以及抗CD3刺激的PBMC中的TOX的升高的表达相关。最重要的是,我们的数据支持以下观点:TOX启动子的低甲基化可能是调节TOX表达的起始物之一,并使TOX在NB患者的T细胞耗竭重编程中发挥关键作用.
    T-cell exhaustion is one of the key reasons for attenuated T-cell cytotoxicity against tumours. At both the expression and epigenetic levels, a number of genes, including the transcription factor TOX, are believed to be implicated in regulating T-cell exhaustion. In the present study, we found that in NB patients, the ratio of exhausted T cells, featuring upregulated PD-1 and Tim-3, was increased. Meanwhile, the expression of inhibitory surface receptors, including Lag-3, CD160, VISTA and KLRG1, was also increased, but this was accompanied by a reduced ability to release the effector molecules IL-2, IFN-γ, TNF-α and Granzyme B in CD3+ T cells from NB patients. It is noteworthy that NB-derived memory T cells (Tm) showed more obvious exhausted characteristics than other T cells. Moreover, the T cells from NB patients possessed a higher potential for exhaustion conversion upon in vitro TCR stimulation in our time-course culture experiment. In NB patients, T-cell exhaustion was demonstrated to correlate with the elevated expression of TOX in freshly sorted CD3+ T cells as well as in anti-CD3 stimulated PBMCs. Most importantly, our data supported the idea that the hypomethylation of the TOX promoter may be one of the initiators that regulates TOX expression and enables TOX to play a crucial role in T-cell exhaustion reprogramming in NB patients.
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  • 文章类型: Journal Article
    胸腺细胞选择相关的HMG盒蛋白(TOX)亚家族包含进化保守的DNA结合蛋白,并在某些免疫细胞亚群中表达,在CD4+T细胞的发育中起关键作用,先天淋巴样细胞(ILC),T滤泡辅助细胞(Tfh),和CD8+T细胞耗尽。虽然它在CD4+T细胞和自然杀伤(NK)细胞中的作用已被广泛研究,最近的发现已经证明了TOX在ILC发展中的作用,Tfh细胞,以及CD8+T细胞耗尽;然而,TOX调节这些免疫细胞的分子机制仍有待阐明。在这次审查中,我们讨论了最近关于TOX对各种免疫细胞发育和CD8T细胞耗竭的影响以及特定TOX家族成员在免疫系统中的作用的研究。此外,这篇综述提出了细胞疗法和免疫疗法的候选调控靶点.
    The thymocyte selection-related HMG box protein (TOX) subfamily comprises evolutionarily conserved DNA-binding proteins, and is expressed in certain immune cell subsets and plays key roles in the development of CD4+ T cells, innate lymphoid cells (ILCs), T follicular helper (Tfh) cells, and in CD8+ T-cell exhaustion. Although its roles in CD4+ T and natural killer (NK) cells have been extensively studied, recent findings have demonstrated previously unknown roles for TOX in the development of ILCs, Tfh cells, as well as CD8+ T-cell exhaustion; however, the molecular mechanism underlying TOX regulation of these immune cells remains to be elucidated. In this review, we discuss recent studies on the influence of TOX on the development of various immune cells and CD8+ T-cell exhaustion and the roles of specific TOX family members in the immune system. Moreover, this review suggests candidate regulatory targets for cell therapy and immunotherapies.
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