Repurposing

Repuring
  • 文章类型: Journal Article
    新药从基础科学发展到临床实践需要数年时间,很多努力,和成本。药物再利用可以促进临床药物在肿瘤治疗中的应用。最近的研究表明,洛米他必特治疗恶性肿瘤的潜在作用,目前用于治疗家族性高胆固醇血症。我们系统地回顾了lomitapide作为抗肿瘤化合物的可能功能和机制。关于凋亡的方面,自噬,和肿瘤细胞的代谢,支持将洛米他必特用于肿瘤的临床治疗。
    The development of novel drugs from basic science to clinical practice requires several years, much effort, and cost. Drug repurposing can promote the utilization of clinical drugs in cancer therapy. Recent studies have shown the potential effects of lomitapide on treating malignancies, which is currently used for the treatment of familial hypercholesterolemia. We systematically review possible functions and mechanisms of lomitapide as an anti-tumor compound, regarding the aspects of apoptosis, autophagy, and metabolism of tumor cells, to support repurposing lomitapide for the clinical treatment of tumors.
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  • 文章类型: Systematic Review
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  • 文章类型: Journal Article
    正电子发射断层扫描(PET)探针具有特异性和敏感性,同时具有辐射风险。值得探索探针原型的化学发射饱和转移(CEST)效应,并将其重新用于CEST成像以避免辐射。在这项研究中,我们使用11C-PiB作为检测淀粉样蛋白的PET探针的例子,并测试了重新利用这种PET探针原型的可行性,PiB,用于CEST成像。在通过初步的体模实验优化参数后,我们使用APP/PS1转基因小鼠和年龄匹配的C57小鼠进行淀粉样蛋白的体内CEST磁共振成像(MRI)。此外,在相同的脑片上进行病理评估,以评估CESTMRI信号异常与免疫组织化学染色检测到的β-淀粉样蛋白沉积之间的相关性。在我们的结果中,Z-光谱显示明显的CEST效应在约6ppm处达到峰值。与对照组相比,注射PiB的9个月大的APP/PS1小鼠显示出显著更高的CEST效应。高信号区域与病理染色显示的Aβ沉积相关。总之,将PET探针原型重新用于CESTMRI成像是可行的,并且能够实现淀粉样蛋白的无标记和无辐射检测,同时保持配体的灵敏度和特异性。这项研究为开发基于PET探针原型的CEST探针打开了大门。
    Positron emission tomography (PET) probes are specific and sensitive while suffering from radiation risk. It is worthwhile to explore the chemical emission saturation transfer (CEST) effects of the probe prototypes and repurpose them for CEST imaging to avoid radiation. In this study, we used 11C-PiB as an example of a PET probe for detecting amyloid and tested the feasibility of repurposing this PET probe prototype, PiB, for CEST imaging. After optimizing the parameters through preliminary phantom experiments, we used APP/PS1 transgenic mice and age-matched C57 mice for in vivo CEST magnetic resonance imaging (MRI) of amyloid. Furthermore, the pathological assessment was conducted on the same brain slices to evaluate the correlation between the CEST MRI signal abnormality and β-amyloid deposition detected by immunohistochemical staining. In our results, the Z-spectra revealed an apparent CEST effect that peaked at approximately 6 ppm. APP/PS1 mice as young as 9 months injected with PiB showed a significantly higher CEST effect compared to the control groups. The hyperintense region was correlated with the Aβ deposition shown by pathological staining. In conclusion, repurposing the PET probe prototype for CEST MRI imaging is feasible and enables label- and radiation-free detection of the amyloid while maintaining the sensitivity and specificity of the ligand. This study opens the door to developing CEST probes based on PET probe prototypes.
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  • 文章类型: Journal Article
    全身炎症反应综合征(SIRS),至少部分是由坏死引起的,以危及生命的多器官衰竭为特征。阻断SIRS的进展和随之而来的多器官功能障碍是具有挑战性的。受体-丝氨酸/苏氨酸蛋白激酶1(RIPK1)是一种重要的细胞死亡和炎症介质,使其成为几种疾病的潜在治疗目标。这里,使用药物再利用的方法,我们表明抑制RIPK1也是SIRS的有效治疗方法。我们对美国食品和药物管理局(FDA)批准的药物库进行了基于细胞的高通量药物筛选,该药物库包含1953种药物,以通过SYTOX绿色染色鉴定坏死细胞死亡的有效抑制剂。顶级候选的剂量反应验证,quizartinib,在HT-22和MEF的两种细胞系中进行。Quizartinib对坏死相关蛋白的影响使用蛋白质印迹法进行评估,免疫沉淀,和体外RIPK1激酶测定。在鼠肿瘤坏死因子α(TNFα)诱导的SIRS模型中评估了奎扎替尼的体内作用。高通量筛选将Quizartinib确定为在体外拯救细胞免于坏死性凋亡的化合物文库中的最高“命中”。Quizartinib通过直接抑制RIPK1激酶活性和阻断下游复合物IIb形成来抑制坏死。此外,quizartinib保护小鼠免受TNFα诱导的SIRS。Quizartinib,作为FDA批准的药物,具有证明的安全性和有效性,被重新用于RIPK1的靶向抑制。这项工作为将奎扎替尼转移到RIPK1依赖性坏死性凋亡诱导的炎性疾病的治疗提供了必要的临床前数据。包括SIRS。
    Systemic inflammatory response syndrome (SIRS), at least in part driven by necroptosis, is characterized by life-threatening multiple organ failure. Blocking the progression of SIRS and consequent multiple organ dysfunction is challenging. Receptor-interacting serine/threonine protein kinase 1 (RIPK1) is an important cell death and inflammatory mediator, making it a potential treatment target in several diseases. Here, using a drug repurposing approach, we show that inhibiting RIPK1 is also an effective treatment for SIRS. We performed cell-based high-throughput drug screening of an US Food and Drug Administration (FDA)-approved drug library that contains 1953 drugs to identify effective inhibitors of necroptotic cell death by SYTOX green staining. Dose-response validation of the top candidate, quizartinib, was conducted in two cell lines of HT-22 and MEFs. The effect of quizartinib on necroptosis-related proteins was evaluated using western blotting, immunoprecipitation, and an in vitro RIPK1 kinase assay. The in vivo effects of quizartinib were assessed in a murine tumor necrosis factor α (TNFα)-induced SIRS model. High-throughput screening identified quizartinib as the top \"hit\" in the compound library that rescued cells from necroptosis in vitro. Quizartinib inhibited necroptosis by directly inhibiting RIPK1 kinase activity and blocking downstream complex IIb formation. Furthermore, quizartinib protected mice against TNFα-induced SIRS. Quizartinib, as an FDA-approved drug with proven safety and efficacy, was repurposed for targeted inhibition of RIPK1. This work provides essential preclinical data for transferring quizartinib to the treatment of RIPK1-dependent necroptosis-induced inflammatory diseases, including SIRS.
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  • 文章类型: Journal Article
    阿片类药物使用障碍(OUD)在全球范围内不断带来重大的公共卫生挑战和社会影响,阿片类药物依赖的急剧上升导致潜在的滥用。尽管一些药物已被批准用于OUD治疗,所述药剂对OUD的功效需要进一步改善,以便提供更安全和更有效的药理学和社会心理治疗。蛋白质包括mu,delta,kappa,痛觉肽,和zeta阿片受体是阿片类药物的直接靶标,在治疗性治疗中起着至关重要的作用。这些受体的蛋白质-蛋白质相互作用(PPI)网络增加了有效的阿片类药物成瘾治疗药物开发过程的复杂性。下面的报告介绍了OUD的PPI网络信息机器学习研究。我们已经检查了五种阿片受体网络中的500多种蛋白质,随后收集了74个抑制剂数据集。通过将梯度增强决策树(GBDT)算法与两个基于高级自然语言处理(NLP)的自动编码器和分子的Transformer指纹配对来构建机器学习模型。有了这些模型,我们系统地评估了超过12万种候选药物对4种阿片受体的筛选和再利用潜力.此外,吸收,分布,新陈代谢,排泄,在筛选潜在候选药物时也考虑了毒性(ADMET)特性.我们的机器学习工具确定了一些具有所需效力和ADMET特性的抑制剂化合物。我们的方法为OUD治疗的药理学开发提供了有价值和有前途的工具。
    Opioid use disorder (OUD) continuously poses major public health challenges and social implications worldwide with dramatic rise of opioid dependence leading to potential abuse. Despite that a few pharmacological agents have been approved for OUD treatment, the efficacy of said agents for OUD requires further improvement in order to provide safer and more effective pharmacological and psychosocial treatments. Proteins including mu, delta, kappa, nociceptin, and zeta opioid receptors are the direct targets of opioids and play critical roles in therapeutic treatments. The protein-protein interaction (PPI) networks of the these receptors increase the complexity in the drug development process for an effective opioid addiction treatment. The report below presents a PPI-network informed machine-learning study of OUD. We have examined more than 500 proteins in the five opioid receptor networks and subsequently collected 74 inhibitor datasets. Machine learning models were constructed by pairing gradient boosting decision tree (GBDT) algorithm with two advanced natural language processing (NLP)-based autoencoder and Transformer fingerprints for molecules. With these models, we systematically carried out evaluations of screening and repurposing potential of more than 120,000 drug candidates for four opioid receptors. In addition, absorption, distribution, metabolism, excretion, and toxicity (ADMET) properties were also considered in the screening of potential drug candidates. Our machine-learning tools determined a few inhibitor compounds with desired potency and ADMET properties for nociceptin opioid receptors. Our approach offers a valuable and promising tool for the pharmacological development of OUD treatments.
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  • 文章类型: Journal Article
    目的:顺铂是晚期非小细胞肺癌(NSCLC)一线治疗的核心化疗药物。然而,耐药性严重阻碍了其临床疗效。这项研究通过重新利用具有推定的组蛋白去乙酰化酶(HDAC)抑制作用的非肿瘤药物来研究顺铂耐药性的规避。
    方法:通过一种名为“DRUGSURV”的计算药物再利用工具鉴定了一些临床批准的药物,并评估了HDAC抑制作用。三安令,最初表示为利尿剂,选择对亲本和顺铂耐药的NSCLC细胞系进行进一步研究。使用磺酰罗丹明B测定来评估细胞增殖。进行蛋白质印迹分析以检查组蛋白乙酰化。流式细胞术用于检测细胞凋亡和细胞周期效应。进行染色质免疫沉淀以研究转录因子与调节顺铂摄取和细胞周期进程的基因启动子的相互作用。在来自顺铂难治性NSCLC患者的患者来源的肿瘤异种移植物(PDX)中,进一步证实了氨苯蝶啶对顺铂耐药性的规避。
    结果:发现氨苯蝶啶抑制HDAC。它被证明可以增强细胞顺铂的积累并增强顺铂诱导的细胞周期停滞,DNA损伤,和凋亡。机械上,发现氨苯蝶啶可诱导染色质中的组蛋白乙酰化,从而减少HDAC1的关联,但促进Sp1与hCTR1和p21基因启动子的相互作用。进一步显示氨蝶啶可增强顺铂在顺铂抗性PDX中的体内抗癌作用。
    结论:研究结果主张进一步临床评估氨苯蝶啶的再利用以克服顺铂耐药。
    OBJECTIVE: Cisplatin is the core chemotherapeutic drug used for first-line treatment of advanced non-small cell lung cancer (NSCLC). However, drug resistance is severely hindering its clinical efficacy. This study investigated the circumvention of cisplatin resistance by repurposing non-oncology drugs with putative histone deacetylase (HDAC) inhibitory effect.
    METHODS: A few clinically approved drugs were identified by a computational drug repurposing tool called \"DRUGSURV\" and evaluated for HDAC inhibition. Triamterene, originally indicated as a diuretic, was chosen for further investigation in pairs of parental and cisplatin-resistant NSCLC cell lines. Sulforhodamine B assay was used to evaluate cell proliferation. Western blot analysis was performed to examine histone acetylation. Flow cytometry was used to examine apoptosis and cell cycle effects. Chromatin immunoprecipitation was conducted to investigate the interaction of transcription factors to the promoter of genes regulating cisplatin uptake and cell cycle progression. The circumvention of cisplatin resistance by triamterene was further verified in a patient-derived tumor xenograft (PDX) from a cisplatin-refractory NSCLC patient.
    RESULTS: Triamterene was found to inhibit HDACs. It was shown to enhance cellular cisplatin accumulation and potentiate cisplatin-induced cell cycle arrest, DNA damage, and apoptosis. Mechanistically, triamterene was found to induce histone acetylation in chromatin, thereby reducing the association of HDAC1 but promoting the interaction of Sp1 with the gene promoter of hCTR1 and p21. Triamterene was further shown to potentiate the anti-cancer effect of cisplatin in cisplatin-resistant PDX in vivo.
    CONCLUSIONS: The findings advocate further clinical evaluation of the repurposing use of triamterene to overcome cisplatin resistance.
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  • 文章类型: Journal Article
    背景:在过去的二十年里,世界见证了人畜共患冠状病毒(CoV)的出现,导致人类轻度到严重的呼吸道疾病。人类冠状病毒(HCoV),主要来自α-CoV和β-CoV属,已经进化为高致病性的,如SARS-CoV-2导致COVID-19大流行。这些冠状病毒携带病毒生命周期所必需的功能性酶,这代表了有吸引力的抗病毒靶标。方法和结果:我们旨在治疗靶向HCoV-NL63和HCoV-229E(来自α-CoV属)以及HCoV-OC43和SARS-CoV-2(来自β-CoV属)的主要蛋白酶(Mpro)。通过虚拟筛选,我们发现了一种FDA批准的药物dyphyline,黄嘌呤衍生物,与催化二位残基结合;Mpro结构的组氨酸和胱氨酸。重要的是,在感染病毒的细胞培养模型中,dyphylline剂量依赖性地抑制病毒复制。结论:我们的发现支持将dhphyline重新用作泛冠状病毒抗病毒剂。
    Background: In the last two decades, the world has witnessed the emergence of zoonotic corona viruses (CoVs), which cause mild to severe respiratory diseases in humans. Human coronaviruses (HCoVs), mainly from the alpha-CoV and beta-CoV genera, have evolved to be highly pathogenic, such as SARS-CoV-2 causing the COVID-19 pandemic. These coronaviruses carry functional enzymes necessary for the virus life cycle, which represent attractive antiviral targets. Methods & Results: We aimed to therapeutically target the main protease (Mpro) of HCoV-NL63 and HCoV-229E (from alpha-CoV genus) and HCoV-OC43 and SARS-CoV-2 (from beta-CoV genus). Through virtual screening, we identified an FDA-approved drug dyphylline, a xanthine derivate, that binds to the catalytic dyad residues; histidine and cystine of the Mpro structures. Importantly, dyphylline dose-dependently inhibited the viral replication in cell culture models infected with the viruses. Conclusion: Our findings support the repurposing of dyphylline as a pan-coronavirus antiviral agent.
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  • 文章类型: Journal Article
    真菌被认为是“沉默的杀手”,由于困难,以及延迟诊断感染和缺乏有效的抗真菌药物。作为真核生物,真菌与人类细胞靶标有几个相似之处,给药物发现制造障碍.白色念珠菌,人体中普遍存在的微生物以其在免疫抑制人群中作为机会病原体的作用而闻名。重要的是,白色念珠菌对目前临床上可用的所有三类抗真菌剂具有抗性。在过去的几年里,已建议在白色念珠菌感染的管理中进行范式转变,其中抗毒性策略被认为是发现新抗真菌剂的替代方案。小分子,分子量小于900道尔顿,可以很容易地渗透细胞膜并调节信号转导途径以引起针对病原体的所需毒力抑制作用。这篇综述进行了深入剖析,用小分子抗毒力方法解决白色念珠菌感染的发现。
    Fungi are considered \"silent killers\" due to the difficulty of, and delays in diagnosis of infections and lack of effective antifungals. This challenge is compounded by the fact that being eukaryotes, fungi share several similarities with human cellular targets, creating obstacles to drug discovery. Candida albicans, a ubiquitous microbe in the human body is well-known for its role as an opportunistic pathogen in immunosuppressed people. Significantly, C. albicans is resistant to all the three classes of antifungals that are currently clinically available. Over the past few years, a paradigm shift has been recommended in the management of C. albicans infections, wherein anti-virulence strategies are considered an alternative to the discovery of new antimycotics. Small molecules, with a molecular weight <900 Daltons, can easily permeate the cell membrane and modulate the signal transduction pathways to elicit desired virulence inhibitory actions against pathogens. This review dissects in-depth, the discoveries that have been made with small-molecule anti-virulence approaches to tackle C. albicans infections.
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  • 文章类型: Journal Article
    多药耐药(MDR)是与抗生素临床应用相关的重要问题。发现和开发具有新型支架的新型抗生素也具有挑战性。因此,现有药物的再利用已成为发现抗生素药物的有希望的策略。Auranofin,一种被批准的金金属药物,多年来一直被用于治疗类风湿性关节炎(RA)。最近的研究表明,金诺芬通过抑制硫氧还蛋白还原酶(TrxR)对多种革兰氏阳性细菌具有很强的抗菌活性。这些成果启发了金络合物作为抗菌剂的发展。在这里,我们讨论了金诺芬和其他金络合物作为抗菌剂的最新进展,为细菌感染的治疗提供了新的观点。
    Multidrug resistance (MDR) is a significant issue associated with the clinical application of antibiotics. It is also challenging to discover and develop new antibiotics with novel scaffolds. Therefore, the repurposing of existing drugs has become a promising strategy for antibiotic drug discovery. Auranofin, an approved gold metallic drug, has been used for the treatment of rheumatoid arthritis (RA) for many years. Recent research revealed that auranofin has strong antibacterial activity against multiple Gram-positive bacteria by inhibiting thioredoxin reductase (TrxR). These results inspired the development of gold complexes as antibacterial agents. Herein, we discuss recent advances in the development of auranofin and other gold complexes as antibacterial agents, providing a new viewpoint for the treatment of bacterial infection.
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  • 文章类型: Journal Article
    COVID-19已在全球范围内传播,并引起了严重的公共卫生和社会问题。尽管几种疫苗已被授权用于紧急使用,仍然需要新的有效抗病毒药物。一些重新利用的药物,包括氯喹,大流行后,羟氯喹和雷德西韦立即用于治疗COVID-19。然而,这些药物的治疗效果尚未在临床研究中得到充分证实。在本文中,我们发现了一种抗疟药,萘酚喹,表现出良好的广谱抗冠状病毒活性。萘醌抑制的HCoV-229E,HCoV-OC43和SARS-CoV-2的体外复制,IC50=2.05±1.44μM,5.83±0.74μM,和2.01±0.38µM,分别。还进行了添加时间测定以探索萘酚喹在SARS-CoV-2复制过程中的功能。结果表明,萘酚喹可能会影响病毒的进入和进入后复制。考虑到萘酚喹的安全性甚至优于氯喹,我们认为萘酚喹有可能被用作治疗冠状病毒感染的广谱药物.
    COVID-19 has spread around the world and caused serious public health and social problems. Although several vaccines have been authorized for emergency use, new effective antiviral drugs are still needed. Some repurposed drugs including Chloroquine, Hydroxychloroquine and Remdesivir were immediately used to treat COVID-19 after the pandemic. However, the therapeutic effects of these drugs have not been fully demonstrated in clinical studies. In this paper, we found an antimalarial drug, Naphthoquine, showed good broad-spectrum anti-coronavirus activity. Naphthoquineinhibited HCoV-229E, HCoV-OC43 and SARS-CoV-2 replication in vitro, with IC50 = 2.05 ± 1.44 μM, 5.83 ± 0.74 μM, and 2.01 ± 0.38 µM, respectively. Time-of-addition assay was also performed to explore at which stage Naphthoquine functions during SARS-CoV-2 replication. The results suggested that Naphthoquine may influence virus entry and post-entry replication. Considering the safety of Naphthoquine was even better than that of Chloroquine, we think Naphthoquine has the potential to be used as a broad-spectrum drug for coronavirus infection.
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