Negative-Sense RNA Viruses

负义 RNA 病毒
  • 文章类型: Journal Article
    病毒家族Phenuiviridae(OrderHareavirales,包含分段的负义单链RNA病毒)具有已知感染动物的高度多样性成员,植物,原生动物,和真菌。在这项研究中,我们发现了一种新的phenuivirus感染从一个小的棕色植物料斗(Laodelphoxstriatellus)中分离出的昆虫病原真菌虫草虫草,该病毒暂定名为“虫草负链RNA病毒1”(CjNRSV1)。CjNRSV1基因组由三个负义单链RNA片段(RNA1-3)组成,长度为7252、2401和1117nt,分别。RNA1、2和3个片段的3'-和5'-末端区域具有相同的序列,RNA片段的末端是互补的,反映了病毒的共同特征。RNA1编码一个包含布尼亚病毒RNA依赖性RNA聚合酶(RdRP)超家族保守域的大蛋白(~274kDa),与Laulavirus属中的phenuivirus编码的RdRP具有57-80%的同一性。RNA2编码一种与运动蛋白(MP,由laulavirus的RNA2编码的植物病毒细胞间运动蛋白)样蛋白(MP-L)。RNA3编码一种蛋白质(〜28kDa),该蛋白质具有苯类核壳蛋白超家族的保守域。使用各种表型病毒和其他未分类的表型病毒的RdRP进行的系统发育分析显示,CjNRSV1与Laulavirus属的已确定成员分组。我们的结果表明,CjNRSV1是Phenuiviridae家族中Laulavirus属的新型真菌感染成员。
    The virus family Phenuiviridae (order Hareavirales, comprising segmented negative-sense single stranded RNA viruses) has highly diverse members that are known to infect animals, plants, protozoans, and fungi. In this study, we identified a novel phenuivirus infecting a strain of the entomopathogenic fungus Cordyceps javanica isolated from a small brown plant hopper (Laodelphax striatellus), and this virus was tentatively named \"Cordyceps javanica negative-strand RNA virus 1\" (CjNRSV1). The CjNRSV1 genome consists of three negative-sense single stranded RNA segments (RNA1-3) with lengths of 7252, 2401, and 1117 nt, respectively. The 3\'- and 5\'-terminal regions of the RNA1, 2, and 3 segments have identical sequences, and the termini of the RNA segments are complementary to each other, reflecting a common characteristic of viruses in the order Hareavirales. RNA1 encodes a large protein (∼274 kDa) containing a conserved domain for the bunyavirus RNA-dependent RNA polymerase (RdRP) superfamily, with 57-80% identity to the RdRP encoded by phenuiviruses in the genus Laulavirus. RNA2 encodes a protein (∼79 kDa) showing sequence similarity (47-63% identity) to the movement protein (MP, a plant viral cell-to-cell movement protein)-like protein (MP-L) encoded by RNA2 of laulaviruses. RNA3 encodes a protein (∼28 kDa) with a conserved domain of the phenuivirid nucleocapsid protein superfamily. Phylogenetic analysis using the RdRPs of various phenuiviruses and other unclassified phenuiviruses showed CjNRSV1 to be grouped with established members of the genus Laulavirus. Our results suggest that CjNRSV1 is a novel fungus-infecting member of the genus Laulavirus in the family Phenuiviridae.
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  • 文章类型: Journal Article
    Cruliviridae是在甲壳类动物中发现的具有10.8-11.5kb基因组的负义RNA病毒家族。Crulivirid基因组由三个RNA片段组成,这些片段具有编码核蛋白(NP)的ORF,糖蛋白(GP),含有RNA定向RNA聚合酶(RdRP)结构域的大(L)蛋白,在一些家庭成员中,一种功能未知的锌指(Z)蛋白。这是国际病毒分类学委员会(ICTV)关于Cruliviridae家族的报告的摘要,可以在ictv上找到。全球/报告/壳病毒科.
    Cruliviridae is a family of negative-sense RNA viruses with genomes of 10.8-11.5 kb that have been found in crustaceans. The crulivirid genome consists of three RNA segments with ORFs that encode a nucleoprotein (NP), a glycoprotein (GP), a large (L) protein containing an RNA-directed RNA polymerase (RdRP) domain, and in some family members, a zinc-finger (Z) protein of unknown function. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Cruliviridae, which is available at ictv.global/report/cruliviridae.
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  • 文章类型: Journal Article
    Wupedeviridae是一类负义RNA病毒,其基因组约为20.5kb,已在无数足类中发现。wupederirid基因组由三个编码核蛋白(NP)的开放阅读框(ORF)的单顺反子RNA片段组成,糖蛋白(GP),和含有RNA指导的RNA聚合酶(RdRP)结构域的大(L)蛋白。这是国际病毒分类委员会(ICTV)关于Wupedeviridae家族的报告摘要,可以在ictv上找到。全球/报告/wupedeviridae.
    Wupedeviridae is a family of negative-sense RNA viruses with genomes of about 20.5 kb that have been found in myriapods. The wupedevirid genome consists of three monocistronic RNA segments with open reading frames (ORFs) that encode a nucleoprotein (NP), a glycoprotein (GP), and a large (L) protein containing an RNA-directed RNA polymerase (RdRP) domain. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Wupedeviridae, which is available at ictv.global/report/wupedeviridae.
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  • 文章类型: Journal Article
    Mypoviridae是一类负义RNA病毒,其基因组约为16.0kb,已在无数足类中发现。mypovirid基因组由三个编码核蛋白(NP)的单顺反子RNA片段组成,糖蛋白(GP),和含有RNA指导的RNA聚合酶(RdRP)结构域的大(L)蛋白。这是国际病毒分类学委员会(ICTV)关于病毒科的报告的摘要,可在ictv获得。全球/报告/病毒科.
    Mypoviridae is a family of negative-sense RNA viruses with genomes of about 16.0 kb that have been found in myriapods. The mypovirid genome consists of three monocistronic RNA segments that encode a nucleoprotein (NP), a glycoprotein (GP), and a large (L) protein containing an RNA-directed RNA polymerase (RdRP) domain. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Mypoviridae, which is available at: ictv.global/report/mypoviridae.
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  • 文章类型: Journal Article
    Jingchuvirales是一类具有9.1-15.3kb基因组的负义RNA病毒,与蜘蛛有关,藤壶,甲壳类动物,昆虫,非洲的鱼类和爬行动物,亚洲,澳大利亚,欧洲,北美和南美。jingchuvirus基因组有两到四个编码糖蛋白(GP)的开放阅读框(ORF),核蛋白(NP),含有RNA定向RNA聚合酶(RdRP)结构域的大(L)蛋白,和/或功能未知的蛋白质。按顺序的病毒仅从其基因组序列中得知。这是国际病毒分类学委员会(ICTV)关于Jingchuvirales和Aliusviridae家族的报告的摘要,Chuviridae,Crepuscuridae,Myriaviridae和Natareviridae,可以在ictv上找到。全球/报告/jingchuvirales,ictv。global/report/aliusviridae,ictv。global/report/chuviridae,ictv。global/report/crepuscuviridae,ictv。全球/报告/肉豆蔻科和ictv。全球/报告/纳氏病毒科,分别。
    Jingchuvirales is an order of negative-sense RNA viruses with genomes of 9.1-15.3 kb that have been associated with arachnids, barnacles, crustaceans, insects, fish and reptiles in Africa, Asia, Australia, Europe, North America and South America. The jingchuviral genome has two to four open reading frames (ORFs) that encode a glycoprotein (GP), a nucleoprotein (NP), a large (L) protein containing an RNA-directed RNA polymerase (RdRP) domain, and/or proteins of unknown function. Viruses in the order are only known from their genome sequences. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the order Jingchuvirales and on the families Aliusviridae, Chuviridae, Crepuscuviridae, Myriaviridae and Natareviridae, which are available at ictv.global/report/jingchuvirales, ictv.global/report/aliusviridae, ictv.global/report/chuviridae, ictv.global/report/crepuscuviridae, ictv.global/report/myriaviridae and ictv.global/report/natareviridae, respectively.
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  • 文章类型: Journal Article
    利什布病毒科是一类负义RNA病毒,基因组约为8.0kb,已在原生生物中发现。利什布韦德基因组由三个编码核蛋白(NP)的开放阅读框(ORF)的单顺反子RNA片段组成,糖蛋白(GP),和含有RNA指导的RNA聚合酶(RdRP)结构域的大(L)蛋白。这是国际病毒分类学委员会(ICTV)关于利什布病毒科的报告的摘要,可以在ictv上找到。全球/报告/利什布病毒科。
    Leishbuviridae is a family of negative-sense RNA viruses with genomes of about 8.0 kb that have been found in protists. The leishbuvirid genome consists of three monocistronic RNA segments with open reading frames (ORFs) that encode a nucleoprotein (NP), a glycoprotein (GP), and a large (L) protein containing an RNA-directed RNA polymerase (RdRP) domain. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Leishbuviridae, which is available at ictv.global/report/leishbuviridae.
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  • 文章类型: Journal Article
    盘形病毒科是一类阴性RNA病毒,其基因组为6.2-9.7kb,与真菌和stramenopiles相关。盘状病毒基因组由三个编码核蛋白(NP)的开放阅读框(ORF)的单顺反子RNA片段组成,一种非结构蛋白(Ns),和含有RNA指导的RNA聚合酶(RdRP)结构域的大(L)蛋白。这是国际病毒分类学委员会(ICTV)关于盘形病毒科的报告的摘要,可以在ictv上找到。全球/报告/椎间盘病毒科。
    Discoviridae is a family of negative-sense RNA viruses with genomes of 6.2-9.7 kb that have been associated with fungi and stramenopiles. The discovirid genome consists of three monocistronic RNA segments with open reading frames (ORFs) that encode a nucleoprotein (NP), a nonstructural protein (Ns), and a large (L) protein containing an RNA-directed RNA polymerase (RdRP) domain. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Discoviridae, which is available at ictv.global/report/discoviridae.
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  • 文章类型: Journal Article
    目的:I型干扰素(IFN-I)信号通路是抗病毒先天性免疫的第一线。必须对其进行精确调节以防止病毒引起的损害。宿主基因在抗病毒先天性免疫信号通路中的作用机制仍值得研究。这里,我们报道了DLG1在正向调节IκB激酶ε(IKKε)介导的IFN-I信号应答中的新作用,以对抗负链RNA病毒复制,而RNA病毒抑制DLG1的表达以进行免疫逃逸。重要的是,E3连接酶March2与IKKε的K27连接的聚泛素化相互作用并促进IKKε,p62是一种货物受体,可识别泛素化的IKKε,用于最终的自噬降解。一起,本研究结果阐明了DLG1在抗病毒IFN-I信号通路和病毒感染抑制中的作用.
    OBJECTIVE: The type-I interferon (IFN-I) signaling pathway is the first line of antiviral innate immunity. It must be precisely regulated against virus-induced damage. The tightly regulated mechanisms of action of host genes in the antiviral innate immune signaling pathway are still worth studying. Here, we report a novel role of DLG1 in positively regulating the IκB kinase epsilon (IKKε)-mediated IFN-I signaling response against negative-stranded RNA virus replication, whereas the RNA virus inhibits the expression of DLG1 for immune escape. Importantly, the E3 ligase March2 interacts with and promotes K27-linked polyubiquitination of IKKε, and p62 is a cargo receptor that recognizes ubiquitinated IKKε for eventual autophagic degradation. Together, the current findings elucidate the role of DLG1 in the antiviral IFN-I signaling pathway and viral infection repression.
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  • 文章类型: Letter
    2023年4月,在国际病毒分类委员会(ICTV)对新提议的分类单元进行年度批准投票之后,对Negarnaviricota门进行了修改和修正。该门由一个新家庭扩展,14个新属,140个新物种两个属538种被更名。一个物种被移动了,四个被废除了。本文介绍了ICTV现在接受的Negarnaviricota的最新分类法。
    In April 2023, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote on newly proposed taxa, the phylum Negarnaviricota was amended and emended. The phylum was expanded by one new family, 14 new genera, and 140 new species. Two genera and 538 species were renamed. One species was moved, and four were abolished. This article presents the updated taxonomy of Negarnaviricota as now accepted by the ICTV.
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  • 文章类型: Journal Article
    液-液相分离(LLPS)在形成细胞无膜细胞器中起着重要作用。然而,宿主因子在负义RNA(NSR)病毒感染过程中如何调节病毒蛋白的LLPS在很大程度上是未知的.这里,我们使用大麦黄色条纹花叶病毒(BYSMV)作为模型,以证明宿主酪蛋白激酶1(CK1)在NSR病毒的相分离和感染中的调节。我们首先发现BYSMV磷蛋白(P)形成具有液体特性的球形颗粒,并在体内募集病毒核苷酸(N)和聚合酶(L)蛋白。此外,P形成的颗粒与ER/肌动蛋白网络相连,用于运输和融合。BYSMVP单独形成液滴,并在体外掺入N蛋白和基因组RNA的5'尾部。有趣的是,BYSMVP的相分离被宿主CK1依赖性的固有无序P蛋白区域的磷酸化抑制。遗传分析表明,未磷酸化的BYSMVP突变体表现出凝聚相,促进病毒质形成和病毒复制。然而,磷酸化模拟突变体存在于病毒转录的弥散相状态。总的来说,我们的结果表明,宿主CK1调节病毒P蛋白和病毒感染的相分离。
    Liquid-liquid phase separation (LLPS) plays important roles in forming cellular membraneless organelles. However, how host factors regulate LLPS of viral proteins during negative-sense RNA (NSR) virus infection is largely unknown. Here, we used barley yellow striate mosaic virus (BYSMV) as a model to demonstrate regulation of host casein kinase 1 (CK1) in phase separation and infection of NSR viruses. We first found that the BYSMV phosphoprotein (P) formed spherical granules with liquid properties and recruited viral nucleotide (N) and polymerase (L) proteins in vivo. Moreover, the P-formed granules were tethered to the ER/actin network for trafficking and fusion. BYSMV P alone formed droplets and incorporated the N protein and the 5\' trailer of genomic RNA in vitro. Interestingly, phase separation of BYSMV P was inhibited by host CK1-dependent phosphorylation of an intrinsically disordered P protein region. Genetic assays demonstrated that the unphosphorylated mutant of BYSMV P exhibited condensed phase, which promoted viroplasm formation and virus replication. Whereas, the phosphorylation-mimic mutant existed in diffuse phase state for virus transcription. Collectively, our results demonstrate that host CK1 modulates phase separation of the viral P protein and virus infection.
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