Gastrointestinal disease

胃肠道疾病
  • 文章类型: Journal Article
    人工智能(AI)是一项划时代的技术,其中最先进的两个部分是机器学习和深度学习算法,这些算法是机器学习进一步发展的,并已部分应用于EUS诊断。据报道,AI辅助EUS诊断在胰腺肿瘤和慢性胰腺炎的诊断中具有重要价值,胃肠道间质瘤,早期食管癌,胆道,和肝脏病变。人工智能在EUS诊断中的应用还存在一些亟待解决的问题。首先,敏感AI诊断工具的开发需要大量高质量的训练数据。第二,当前的人工智能算法存在过拟合和偏差,导致诊断可靠性差。第三,人工智能的价值仍需要在前瞻性研究中确定。第四,人工智能的道德风险需要考虑和避免。
    Artificial intelligence (AI) is an epoch-making technology, among which the 2 most advanced parts are machine learning and deep learning algorithms that have been further developed by machine learning, and it has been partially applied to assist EUS diagnosis. AI-assisted EUS diagnosis has been reported to have great value in the diagnosis of pancreatic tumors and chronic pancreatitis, gastrointestinal stromal tumors, esophageal early cancer, biliary tract, and liver lesions. The application of AI in EUS diagnosis still has some urgent problems to be solved. First, the development of sensitive AI diagnostic tools requires a large amount of high-quality training data. Second, there is overfitting and bias in the current AI algorithms, leading to poor diagnostic reliability. Third, the value of AI still needs to be determined in prospective studies. Fourth, the ethical risks of AI need to be considered and avoided.
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  • 文章类型: Journal Article
    大型语言模型(LLM)在临床信息处理中起着至关重要的作用,展示跨不同语言任务的强大概括。然而,现有LLM,尽管意义重大,缺乏临床应用的优化,在幻想和可解释性方面提出挑战。检索增强生成(RAG)模型通过提供答案生成的来源来解决这些问题,从而减少错误。本研究探讨RAG技术在临床胃肠病学中的应用,以增强对胃肠道疾病的知识生成。
    我们使用由25个胃肠道疾病指南组成的语料库对嵌入模型进行了微调。与基础模型相比,微调模型的命中率提高了18%,gte-base-zh.此外,它的性能优于OpenAI的嵌入模型20%。使用带有骆驼索引的RAG框架,我们开发了一个中国胃肠病学聊天机器人,名为“胃机器人”,“这显著提高了答案的准确性和上下文相关性,最大限度地减少错误和传播误导性信息的风险。
    在使用RAGAS框架评估GastroBot时,我们观察到95%的上下文召回率。对源头的忠诚,为93.73%。答案的相关性表现出很强的相关性,达到92.28%。这些发现强调了GastroBot在提供有关胃肠道疾病的准确和上下文相关信息方面的有效性。在对GastroBot进行手动评估期间,与其他型号相比,我们的GastroBot模型提供了大量有价值的知识,同时确保结果的完整性和一致性。
    研究结果表明,将RAG方法纳入临床胃肠病学可以增强大型语言模型的准确性和可靠性。作为该方法的实际实现,GastroBot在上下文理解和响应质量方面表现出显着增强。模型的不断探索和完善有望推动胃肠病学领域的临床信息处理和决策支持。
    UNASSIGNED: Large Language Models (LLMs) play a crucial role in clinical information processing, showcasing robust generalization across diverse language tasks. However, existing LLMs, despite their significance, lack optimization for clinical applications, presenting challenges in terms of illusions and interpretability. The Retrieval-Augmented Generation (RAG) model addresses these issues by providing sources for answer generation, thereby reducing errors. This study explores the application of RAG technology in clinical gastroenterology to enhance knowledge generation on gastrointestinal diseases.
    UNASSIGNED: We fine-tuned the embedding model using a corpus consisting of 25 guidelines on gastrointestinal diseases. The fine-tuned model exhibited an 18% improvement in hit rate compared to its base model, gte-base-zh. Moreover, it outperformed OpenAI\'s Embedding model by 20%. Employing the RAG framework with the llama-index, we developed a Chinese gastroenterology chatbot named \"GastroBot,\" which significantly improves answer accuracy and contextual relevance, minimizing errors and the risk of disseminating misleading information.
    UNASSIGNED: When evaluating GastroBot using the RAGAS framework, we observed a context recall rate of 95%. The faithfulness to the source, stands at 93.73%. The relevance of answers exhibits a strong correlation, reaching 92.28%. These findings highlight the effectiveness of GastroBot in providing accurate and contextually relevant information about gastrointestinal diseases. During manual assessment of GastroBot, in comparison with other models, our GastroBot model delivers a substantial amount of valuable knowledge while ensuring the completeness and consistency of the results.
    UNASSIGNED: Research findings suggest that incorporating the RAG method into clinical gastroenterology can enhance the accuracy and reliability of large language models. Serving as a practical implementation of this method, GastroBot has demonstrated significant enhancements in contextual comprehension and response quality. Continued exploration and refinement of the model are poised to drive forward clinical information processing and decision support in the gastroenterology field.
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  • 文章类型: Journal Article
    姜黄素(CCM)是从姜黄根茎中提取的多酚化合物。它具有多种生物活性,包括抗菌,抗炎,抗癌,和抗氧化剂。由于其活动的多样性,研究人员经常使用它来研究对各种疾病的治疗效果。然而,它的溶解性差导致生物利用度差,有必要在载体的帮助下增加水溶性以提高治疗效果。胃肠病是全球范围内持续影响人类健康的重大健康问题。在这次审查中,综述了CCM在多种胃肠道疾病中的可能作用机制和治疗效果,纳米修复剂对CCM疗效的改善。最后,我们的结论是,已经有许多CCM与其他药物联合治疗胃肠道疾病的临床试验,但到目前为止,很少有人使用CCM纳米材料进行治疗。尽管体外和临床前实验表明,纳米分离可以提高CCM的疗效,关于承运人安全的研究仍然不足。
    Curcumin (CCM) is a polyphenol compound extracted from the turmeric rhizome. It has various biological activities, including antibacterial, anti-inflammatory, anti-cancer, and antioxidant. Due to its diverse activities, it is often used by researchers to study the therapeutic effects on various diseases. However, its poor solubility leads to poor bioavailability, and it is necessary to increase the water solubility with the help of carriers to improve the therapeutic effect. Gastrointestinal disease is a major global health problem that continues to affect human health. In this review, we have summarized the possible mechanism and therapeutic effect of CCM in various gastrointestinal diseases, and the improvement in the curative effect of CCM with nanopreparation. Finally, we concluded that there have been many clinical trials of CCM in combination with other drugs for the treatment of gastrointestinal disease, but so far, few have used CCM nanomaterials for treatment. Although in vitro and preclinical experiments have shown that nanopreparations can improve the efficacy of CCM, there are still insufficient studies on the safety of carriers.
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  • 文章类型: Journal Article
    背景:最近的研究越来越强调肠道菌群与胃肠道疾病风险之间的强相关性。然而,这种关系是因果关系还是仅仅是巧合仍然不确定。为了解决这个问题,a进行孟德尔随机化(MR)分析,以探索肠道微生物群与常见胃肠道疾病之间的联系.
    方法:肠道菌群的全基因组关联研究(GWAS)汇总统计,涵盖了211个分类单元(131属,35个家庭,20个订单,16班,和9门),来自MiBioGen的综合研究。从英国生物银行收集了与22种胃肠道疾病的遗传关联,FinnGen研究,和各种广泛的GWAS研究。精心进行MR分析以评估遗传预测的肠道微生物群与这些胃肠道疾病之间的因果关系。为了验证我们研究结果的可靠性,系统进行了异质性的敏感性分析和检验。
    结果:MR分析为基因预测的肠道微生物群与胃肠道疾病风险之间的251个因果关系提供了重要证据。这包括98与上消化道疾病的关联,81患有下消化道疾病,54患有肝胆疾病,和18患有胰腺疾病。值得注意的是,这些关联在属于Ruminococus和Eubacterium属的类群中尤为明显.进一步的敏感性分析加强了这些结果的稳健性。
    结论:这项研究的结果表明,肠道菌群与胃肠道疾病有潜在的遗传倾向。这些见解为设计未来专注于微生物组相关干预措施的临床试验铺平了道路。包括使用依赖微生物组的代谢物,治疗或管理胃肠道疾病及其相关危险因素。
    Recent research increasingly highlights a strong correlation between gut microbiota and the risk of gastrointestinal diseases. However, whether this relationship is causal or merely coincidental remains uncertain. To address this, a Mendelian randomization (MR) analysis was undertaken to explore the connections between gut microbiota and prevalent gastrointestinal diseases.
    Genome-wide association study (GWAS) summary statistics for gut microbiota, encompassing a diverse range of 211 taxa (131 genera, 35 families, 20 orders, 16 classes, and 9 phyla), were sourced from the comprehensive MiBioGen study. Genetic associations with 22 gastrointestinal diseases were gathered from the UK Biobank, FinnGen study, and various extensive GWAS studies. MR analysis was meticulously conducted to assess the causal relationship between genetically predicted gut microbiota and these gastrointestinal diseases. To validate the reliability of our findings, sensitivity analyses and tests for heterogeneity were systematically performed.
    The MR analysis yielded significant evidence for 251 causal relationships between genetically predicted gut microbiota and the risk of gastrointestinal diseases. This included 98 associations with upper gastrointestinal diseases, 81 with lower gastrointestinal diseases, 54 with hepatobiliary diseases, and 18 with pancreatic diseases. Notably, these associations were particularly evident in taxa belonging to the genera Ruminococcus and Eubacterium. Further sensitivity analyses reinforced the robustness of these results.
    The findings of this study indicate a potential genetic predisposition linking gut microbiota to gastrointestinal diseases. These insights pave the way for designing future clinical trials focusing on microbiome-related interventions, including the use of microbiome-dependent metabolites, to potentially treat or manage gastrointestinal diseases and their associated risk factors.
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  • 文章类型: Review
    胃镜检查,诊断上消化道疾病的重要工具,最近结合了人工智能(AI)技术,以缓解一些病变的内窥镜诊断所涉及的挑战,从而提高诊断的准确性。这篇叙述性综述涵盖了有关AI技术在胃镜检查中的各种应用的研究现状,探讨了未来的研究方向。通过提供此评论,我们希望促进胃镜和人工智能技术的整合,与长期的临床应用,可以帮助患者。
    Gastroscopy, a critical tool for the diagnosis of upper gastrointestinal diseases, has recently incorporated artificial intelligence (AI) technology to alleviate the challenges involved in endoscopic diagnosis of some lesions, thereby enhancing diagnostic accuracy. This narrative review covers the current status of research concerning various applications of AI technology to gastroscopy, then discusses future research directions. By providing this review, we hope to promote the integration of gastroscopy and AI technology, with long-term clinical applications that can assist patients.
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  • 文章类型: Clinical Study
    缺乏对空气污染与胃肠道(GI)疾病风险之间关联的全面概述。我们旨在研究长期暴露于空气动力学直径≤2.5μm(PM2.5)的环境颗粒物(PM)的关系,2.5-10μm(PMc),≤10μm(PM10),和二氧化氮(NO2和NOx),有胃肠道(GI)疾病的风险,并探讨遗传易感性与空气污染之间的相互作用。在基线时,英国生物银行总共纳入了465,703名没有胃肠道疾病的参与者。采用土地利用回归模型计算居民大气污染物浓度。Cox比例风险模型用于评估空气污染物与胃肠道疾病风险的关系。通过有限的三次样条曲线评估了空气污染物与胃肠道疾病风险的剂量反应关系。我们发现,长期暴露于环境空气污染物与消化性溃疡的风险呈正相关[PM2.5(Q4与Q1:风险比(HR)1.272,95%置信区间(CI)1.179-1.372),NO2(1.220,1.131-1.316),和NOx(1.277,1.184-1.376)]和慢性胃炎[PM2.5(1.454,1.309-1.616),PM10(1.232,1.112-1.366),NO2(1.456,1.311-1.617),和NOx(1.419,1.280-1.574)]Bonferroni校正后。具有高遗传风险和高空气污染物暴露水平的参与者患消化性溃疡的风险最高,与低遗传风险和低空气污染物暴露水平[PM2.5(1.558,1.384-1.754);NO2(1.762,1.395-2.227);NOx(1.575,1.403-1.769)]相比。然而,没有发现空气污染物与遗传风险之间的显着加性或乘性相互作用。总之,长期暴露于环境空气污染物与消化性溃疡和慢性胃炎的风险增加相关.
    A comprehensive overview of the associations between air pollution and the risk of gastrointestinal (GI) diseases has been lacking. We aimed to examine the relationships of long-term exposure to ambient particulate matter (PM) with aerodynamic diameter ≤2.5 μm (PM2.5), 2.5-10 μm (PMcoarse), ≤10 μm (PM10), nitrogen dioxide (NO2), and nitrogen oxides (NOx), with the risk of incident GI diseases, and to explore the interplay between air pollution and genetic susceptibility. A total of 465,703 participants free of GI diseases in the UK Biobank were included at baseline. Land use regression models were employed to calculate the residential air pollutants concentrations. Cox proportional hazard models were used to evaluate the associations of air pollutants with the risk of GI diseases. The dose-response relationships of air pollutants with the risk of GI diseases were evaluated by restricted cubic spline curves. We found that long-term exposure to ambient air pollutants was positively associated with the risk of peptic ulcer (PM2.5 : Q4 vs. Q1: hazard ratio (HR) 1.272, 95% confidence interval (CI) 1.179-1.372, NO2: 1.220, 1.131-1.316, and NOx: 1.277, 1.184-1.376) and chronic gastritis (PM2.5: 1.454, 1.309-1.616, PM10 : 1.232, 1.112-1.366, NO2: 1.456, 1.311-1.617, and NOx: 1.419, 1.280-1.574) after Bonferroni correction. Participants with high genetic risk and high air pollution exposure had the highest risk of peptic ulcer, compared to those with low genetic risk and low air pollution exposure (PM2.5: HR 1.558, 95%CI 1.384-1.754, NO2: 1.762, 1.395-2.227, and NOx: 1.575, 1.403-1.769). However, no significant additive or multiplicative interaction between air pollution and genetic risk was found. In conclusion, long-term exposure to ambient air pollutants was associated with increased risk of peptic ulcer and chronic gastritis.
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  • 文章类型: Journal Article
    为了满足从胃肠道(GIT)内窥镜图像进行强大疾病诊断的迫切需要,我们提出了FLATER,一个快速的,轻量级,和高度精确的基于变压器的模型。FLATER由一个残差块组成,视觉变压器模块,和空间注意块,同时关注当地特色和全球关注。它可以利用卷积神经网络(CNN)和视觉变压器(ViT)的功能。我们将内窥镜图像的分类分解为两个子任务:用于区分正常图像和病理图像的二进制分类,以及用于将图像分类为特定疾病的进一步的多类分类。即溃疡性结肠炎,息肉,和食管炎.FLATER在这些任务中表现出了非凡的能力,二元分类准确率达到96.4%,三元分类准确率达到99.7%,超越大多数现有模型。值得注意的是,从零开始训练时,FLATER可以保持令人印象深刻的表现,强调其稳健性。除了精度高,FLATER拥有卓越的效率,达到每秒16.4k图像的显著吞吐量,将FLATer定位为临床实践中快速疾病识别的令人信服的候选人。
    In response to the pressing need for robust disease diagnosis from gastrointestinal tract (GIT) endoscopic images, we proposed FLATer, a fast, lightweight, and highly accurate transformer-based model. FLATer consists of a residual block, a vision transformer module, and a spatial attention block, which concurrently focuses on local features and global attention. It can leverage the capabilities of both convolutional neural networks (CNNs) and vision transformers (ViT). We decomposed the classification of endoscopic images into two subtasks: a binary classification to discern between normal and pathological images and a further multi-class classification to categorize images into specific diseases, namely ulcerative colitis, polyps, and esophagitis. FLATer has exhibited exceptional prowess in these tasks, achieving 96.4% accuracy in binary classification and 99.7% accuracy in ternary classification, surpassing most existing models. Notably, FLATer could maintain impressive performance when trained from scratch, underscoring its robustness. In addition to the high precision, FLATer boasted remarkable efficiency, reaching a notable throughput of 16.4k images per second, which positions FLATer as a compelling candidate for rapid disease identification in clinical practice.
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  • 文章类型: Journal Article
    最近的几项研究表明肠道菌群与胃肠道疾病之间存在关联。然而,肠道菌群与胃肠道疾病之间的因果关系尚不清楚.
    我们使用孟德尔随机化(MR)分析评估了肠道微生物群与八种常见胃肠道疾病之间的因果关系。IVW结果被认为是主要结果。Cochrane的Q和MR-Egger测试用于测试异质性和多效性。留一法用于测试MR结果的稳定性,Bonferroni校正用于检验暴露与结局之间因果关系的强度。
    对196种肠道菌群和8种常见胃肠道疾病表型的MR分析显示,62种菌群和常见胃肠道疾病具有潜在的因果关系。在这些潜在的因果关系中,在Bonferroni校正测试之后,草酸杆菌属和CD之间仍然存在显著的因果关系(OR=1.29,95%CI:1.13-1.48,p=2.5×10-4,q=4.20×10-4),梭菌属1和IBS之间(OR=0.9967,95%CI:0.9944-0.9991,p=1.3×10-3,q=1.56×10-3)。Cochrane的Q检验显示各种单核苷酸多态性(SNP)之间没有显着的异质性。此外,根据MR-Egger,没有发现明显的多效性水平。
    这项研究为肠道微生物群介导的胃肠道疾病的机制提供了新的见解,并为靶向特定的肠道微生物群治疗胃肠道疾病提供了一些指导。
    UNASSIGNED: Several recent studies have shown an association between gut microbiota and gastrointestinal diseases. However, the causal relationship between gut microbiota and gastrointestinal disorders is unclear.
    UNASSIGNED: We assessed causal relationships between gut microbiota and eight common gastrointestinal diseases using Mendelian randomization (MR) analyses. IVW results were considered primary results. Cochrane\'s Q and MR-Egger tests were used to test for heterogeneity and pleiotropy. Leave-one-out was used to test the stability of the MR results, and Bonferroni correction was used to test the strength of the causal relationship between exposure and outcome.
    UNASSIGNED: MR analyses of 196 gut microbiota and eight common gastrointestinal disease phenotypes showed 62 flora and common gastrointestinal diseases with potential causal relationships. Among these potential causal relationships, after the Bonferroni-corrected test, significant causal relationships remained between Genus Oxalobacter and CD (OR = 1.29, 95% CI: 1.13-1.48, p = 2.5 × 10-4, q = 4.20 × 10-4), and between Family Clostridiaceae1 and IBS (OR = 0.9967, 95% CI: 0.9944-0.9991, p = 1.3 × 10-3, q = 1.56 × 10-3). Cochrane\'s Q-test showed no significant heterogeneity among the various single nucleotide polymorphisms (SNPs). In addition, no significant level of pleiotropy was found according to the MR-Egger.
    UNASSIGNED: This study provides new insights into the mechanisms of gut microbiota-mediated gastrointestinal disorders and some guidance for targeting specific gut microbiota for treating gastrointestinal disorders.
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  • 文章类型: Meta-Analysis
    目的:系统评价胃肠安丸(,WCA)联合西药(WM)治疗胃肠道疾病。
    方法:八个数据库,包括中国国家知识基础设施数据库,万方数据,中国科技期刊数据库,SinoMed,PubMed,WebofScience,科克伦图书馆,和Embase,从开始到2021年9月30日,我们搜索了WCA的随机对照试验(RCT)。我们独立筛选了文献,提取的数据,然后评估偏差风险,有效性,安全,和其他指标所包含的文章。
    结果:本研究共纳入33项RCTs,共3368例患者。经过分析,发现WCA联合WM能有效预防和治疗抗生素相关的胃肠道反应,功能性消化不良(FD),肠易激综合征,轮状病毒腹泻(RVD),溃疡性结肠炎(UC);无严重不良反应发生。此外,与对照组相比,实验组症状和一些生化指标明显改善。
    结论:WCA联合WM治疗胃肠道疾病的临床疗效优于对照组。无严重不良反应。值得注意的是,在FD的治疗中,RVD,UC,WCA改善临床症状和生化指标表达。然而,由于文献的质量和数量有限,结果需要使用高质量的RCT进一步研究。
    To systematically evaluate the efficacy and safety of Weichang\'an pill (, WCA) combined with Western Medicine (WM) for the treatment of gastrointestinal diseases.
    Eight databases, including China National Knowledge Infrastructure Database, Wanfang Data, China Science and Technology Journal Database, SinoMed, PubMed, Web of Science, Cochrane Library, and Embase, were searched for randomized controlled trials (RCTs) of WCA from inception to 30 September 2021. We independently screened the literature, extracted data, and then evaluated the bias risk, effectiveness, safety, and other indicators of the included articles.
    A total of 33 RCTs were included in this study with 3368 patients. After analysis, it was found that WCA combined with WM could effectively prevent and treat antibiotic-associated gastrointestinal reaction, functional dyspepsia (FD), irritable bowel syndrome, rotavirus diarrhea (RVD), and ulcerative colitis (UC); no serious adverse reactions occurred. Moreover, compared with the control group, the experimental group showed significantly improved symptoms and some biochemical parameters.
    WCA combined with WM for the treatment of gastrointestinal diseases had better clinical efficacy than the control group, without serious adverse reactions. Notably, in the treatment of FD, RVD, and UC, WCA improved clinical symptoms and biochemical indicator expression. Nevertheless, owing to the restricted quality and quantity of the literature, the results need to be further studied using high-quality RCTs.
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  • 文章类型: Journal Article
    目的:胃肠道疾病(GI)与心血管疾病(CVD)之间的关系尚不清楚。我们进行了一项前瞻性队列研究,以探讨它们的关联。
    方法:本研究包括来自英国生物库队列的330.751名没有基线CVD的个体。对有和没有地理标志的个人进行跟踪,直到确定事件CVD,包括冠心病(CHD),脑血管疾病(CeVD),心力衰竭(HF)和外周动脉疾病(PAD)。结合全国住院数据证实了疾病的诊断,初级保健数据,和癌症登记处。多变量Cox比例风险回归模型用于评估GI与CVD事件风险之间的关联。
    结果:在11.8年的中位随访期间,诊断为31.605例CVD事件。患有GI的个体患CVD的风险升高(风险比1.37;95%置信区间1.34-1.41,P<0.001)。15个GI中有11个与Bonferroni校正后CVD风险增加相关,包括肝硬化,非酒精性脂肪性肝病,胃炎和十二指肠炎,肠易激综合征,巴雷特食管,胃食管反流病,消化性溃疡,乳糜泻,憩室,阑尾炎,和胆道疾病。这些协会在女性中更强,年龄≤60岁的人,体重指数≥25kg/m2者。
    结论:这项大规模前瞻性队列研究揭示了GI与心血管事件风险增加的关联,特别是CHD和PAD。这些发现支持在胃肠道疾病患者中加强二级CVD预防。
    OBJECTIVE: The associations between gastrointestinal diseases (GIs) and cardiovascular disease (CVD) were unclear. We conducted a prospective cohort study to explore their associations.
    METHODS: This study included 330 751 individuals without baseline CVD from the UK Biobank cohort. Individuals with and without GIs were followed up until the ascertainment of incident CVDs, including coronary heart disease (CHD), cerebrovascular disease (CeVD), heart failure (HF), and peripheral artery disease (PAD). The diagnosis of diseases was confirmed with combination of the nationwide inpatient data, primary care data, and cancer registries. A multivariable Cox proportional hazard regression model was used to estimate the associations between GIs and the risk of incident CVD.
    RESULTS: During a median follow-up of 11.8 years, 31 605 incident CVD cases were diagnosed. Individuals with GIs had an elevated risk of CVD (hazard ratio 1.37; 95% confidence interval 1.34-1.41, P < 0.001). Eleven out of 15 GIs were associated with an increased risk of CVD after Bonferroni-correction, including cirrhosis, non-alcoholic fatty liver disease, gastritis and duodenitis, irritable bowel syndrome, Barrett\'s esophagus, gastroesophageal reflux disease, peptic ulcer, celiac disease, diverticulum, appendicitis, and biliary disease. The associations were stronger among women, individuals aged ≤60 years, and those with body mass index ≥25 kg/m2.
    CONCLUSIONS: This large-scale prospective cohort study revealed the associations of GIs with an increased risk of incident CVD, in particular CHD and PAD. These findings support the reinforced secondary CVD prevention among patients with gastrointestinal disorders.
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