EF-Tu

EF - Tu
  • 文章类型: Journal Article
    在蓝细菌中,延长因子Tu(EF-Tu)在光系统II(PSII)的修复中起着至关重要的作用,它非常容易受到光暴露引起的氧化应激和活性氧(ROS)的调节。然而,目前尚不清楚ROS调控EF-Tu功能的具体分子机制。先前的研究表明,突变的EF-Tu,其中C82被Ser残基取代,可以减轻光抑制,强调了C82在EF-Tu光敏中的重要作用。在这项研究中,我们阐明了ROS如何通过分别检查野生型和突变形式(C82S)的EF-Tu的晶体结构来使EF-Tu失活,分辨率分别为1.7和2.0。具体来说,EF-Tu的GDP约束形式采用开放式构型,C82位于内部,使其抗氧化。开关I和II的协调构象变化创建了一个通道,将C82定位为ROS相互作用,揭示了EF-Tu封闭构象对氧化的脆弱性。对这两种结构的分析表明,C82的精确空间排列在调节EF-Tu对ROS的反应中起着至关重要的作用。作为控制光合生物合成的调节元件。
    In cyanobacteria, Elongation factor Tu (EF-Tu) plays a crucial role in the repair of photosystem II (PSII), which is highly susceptible to oxidative stress induced by light exposure and regulated by reactive oxygen species (ROS). However, the specific molecular mechanism governing the functional regulation of EF-Tu by ROS remains unclear. Previous research has shown that a mutated EF-Tu, where C82 is substituted with a Ser residue, can alleviate photoinhibition, highlighting the important role of C82 in EF-Tu photosensitivity. In this study, we elucidated how ROS deactivate EF-Tu by examining the crystal structures of EF-Tu in both wild-type and mutated form (C82S) individually at resolutions of 1.7 Å and 2.0 Å in Synechococcus elongatus PCC 7942 complexed with GDP. Specifically, the GDP-bound form of EF-Tu adopts an open conformation with C82 located internally, making it resistant to oxidation. Coordinated conformational changes in switches I and II create a tunnel that positions C82 for ROS interaction, revealing the vulnerability of the closed conformation of EF-Tu to oxidation. An analysis of these two structures reveals that the precise spatial arrangement of C82 plays a crucial role in modulating EF-Tu\'s response to ROS, serving as a regulatory element that governs photosynthetic biosynthesis.
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  • 文章类型: Journal Article
    靶向翻译因子蛋白有望开发创新的抗结核药物。在蛋白质翻译过程中,许多因素导致核糖体在信使RNA(mRNA)处停滞。为了维持蛋白质的稳态,细菌已经进化出各种核糖体拯救机制,包括主要的翻译过程,释放停滞的核糖体并去除异常的mRNA。拯救系统需要翻译延伸因子蛋白(EF)的参与,并且对于细菌生理和繁殖至关重要。然而,它们在真核进化过程中消失,这使得必需蛋白和翻译延伸因子有望成为抗菌药物的靶点。这里,我们综述了翻译延伸因子EF-Tu的结构和分子机制,EF-Ts,和EF-G,在结核分枝杆菌(Mtb)的正常翻译和核糖体拯救机制中起着至关重要的作用。我们还简要描述了基于结构的,计算机辅助抗结核药物研究。
    Targeting translation factor proteins holds promise for developing innovative anti-tuberculosis drugs. During protein translation, many factors cause ribosomes to stall at messenger RNA (mRNA). To maintain protein homeostasis, bacteria have evolved various ribosome rescue mechanisms, including the predominant trans-translation process, to release stalled ribosomes and remove aberrant mRNAs. The rescue systems require the participation of translation elongation factor proteins (EFs) and are essential for bacterial physiology and reproduction. However, they disappear during eukaryotic evolution, which makes the essential proteins and translation elongation factors promising antimicrobial drug targets. Here, we review the structural and molecular mechanisms of the translation elongation factors EF-Tu, EF-Ts, and EF-G, which play essential roles in the normal translation and ribosome rescue mechanisms of Mycobacterium tuberculosis (Mtb). We also briefly describe the structure-based, computer-assisted study of anti-tuberculosis drugs.
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  • 文章类型: Journal Article
    滑膜支原体(MS)是世界范围内流行的主要禽类病原体,可引起鸟类的呼吸道炎和滑膜炎。建议将疫苗接种作为控制MS感染的最具成本效益的策略。需要新的替代疫苗来根除和控制鸡群中的MS感染。DnaK,烯醇化酶,延伸率Tu(EF-Tu),MSPB,NADH氧化酶和LP78是MS的主要免疫原性抗原,并且是亚单位疫苗候选物的有希望的靶标。在本研究中,编码DnaK的基因,烯醇化酶,EF-Tu,MSPB,克隆了LP78和NADH氧化酶并在大肠杆菌中表达。酶联免疫吸附试验表明,6种重组蛋白均被恢复期血清识别,表明它们在感染期间表达。6个亚单位疫苗的两次注射诱导了强烈的抗体应答并增加了IFN-γ和IL-4的浓度,尤其是rEnolase和rEF-Tu。所有免疫组的外周血淋巴细胞增殖均增强。用rEnolase免疫的鸡,rEF-Tu,rLP78和rMSPB对MS感染具有重要的保护作用,气管中的DNA拷贝明显较低,气囊病变评分较低,气管粘膜厚度小于攻击对照。尤其是,rEnolase提供了最好的保护功效,其次是rEF-Tu,rMSPB,rLP78我们的发现表明,亚单位疫苗和菌苗只能减少MS感染引起的病变,但不能阻止生物体的定殖。我们的发现可能有助于开发针对MS感染的新型疫苗制剂。
    Mycoplasma synoviae (MS) is a primary avian pathogen prevalent worldwide that causes airsacculitis and synovitis in birds. Vaccination is recommended as the most cost-effective strategy in the control of MS infection. Novel alternative vaccines are needed for eradicating and controlling MS infection in flocks. DnaK, enolase, elongation factor Tu (EF-Tu), MSPB, NADH oxidase and LP78 are the major immunogenic antigens of MS and are promising targets for subunit vaccine candidates. In the present study, genes encoding DnaK, enolase, EF-Tu, MSPB, LP78, and NADH oxidase were cloned and expressed in Escherichia coli. Enzyme-linked immunosorbent assay showed that the six recombinant proteins were recognized by convalescent sera, indicating that they were expressed during infection. Two injections of the six subunit vaccines induced a robust antibody response and increased the concentrations of IFN-γ and IL-4, especially rEnolase and rEF-Tu. The proliferation of peripheral blood lymphocytes was enhanced in all of the immunized groups. Chickens immunized with rEnolase, rEF-Tu, rLP78, and rMSPB conferred significant protection against MS infection, as indicated by significantly lower DNA copies in the trachea, lower scores of air sac lesions, and lesser tracheal mucosal thickness than that in the challenge control. Especially, rEnolase provided the best protective efficacy, followed by rEF-Tu, rMSPB, and rLP78. Our finds demonstrate that the subunit vaccines and bacterin can only reduce the lesions caused by MS infection, but not prevent colonization of the organism. Our findings may contribute to the development of novel vaccine agents against MS infection.
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  • 文章类型: Journal Article
    大豆延伸因子Tu家族(EF-Tu)蛋白,确定GmEF8与GmCBL1相互作用,并且发现GmEF8表达是由各种非生物胁迫如干旱和热诱导的。在拟南芥中鉴定出GmEF8的直系同源物,对干旱和热胁迫表现出超敏反应的T-DNA敲除系。与GmEF8互补拯救了拟南芥突变体对干旱和热胁迫的敏感性,GmEF8过表达赋予了转基因拟南芥植物耐旱性和耐热性。在大豆中,与具有RNAiGmEF8敲低毛状根(MR-GmEF8)和对照毛状根(EV)的植物相比,具有GmEF8过表达的毛状根(OE-GmEF8)的植物表现出增强的干旱和耐热性,并且脯氨酸水平更高。许多干旱响应基因,如GmRD22和GmP5CS,与正常生长条件下的MR-GmEF8和EV相比,在OE-GmEF8品系中诱导。这些结果表明,GmEF8在调节拟南芥和大豆的干旱和热胁迫中具有积极作用。这项研究揭示了大豆GmEF8基因在响应非生物胁迫中的潜在作用,为进一步研究应激信号转导途径的复杂性奠定了基础。
    A soybean elongation factor Tu family (EF-Tu) protein, GmEF8, was determined to interact with GmCBL1, and GmEF8 expression was found to be induced by various abiotic stresses such as drought and heat. An ortholog of GmEF8 was identified in Arabidopsis, a T-DNA knockout line for which exhibited hypersensitivity to drought and heat stresses. Complementation with GmEF8 rescued the sensitivity of the Arabidopsis mutant to drought and heat stresses, and GmEF8 overexpression conferred drought and heat tolerance to transgenic Arabidopsis plants. In soybean, plants with GmEF8-overexpressing hairy roots (OE-GmEF8) exhibited enhanced drought and heat tolerance and had higher proline levels compared to plants with RNAi GmEF8-knockdown hairy roots (MR-GmEF8) and control hairy roots (EV). A number of drought-responsive genes, such as GmRD22 and GmP5CS, were induced in the OE-GmEF8 line compared to MR-GmEF8 and EV under normal growth conditions. These results suggest that GmEF8 has a positive role in regulating drought and heat stresses in Arabidopsis and soybean. This study reveals a potential role of the soybean GmEF8 gene in response to abiotic stresses, providing a foundation for further investigation into the complexities of stress signal transduction pathways.
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  • 文章类型: Journal Article
    热不稳定伸长因子(EF-Tu),丰富的多功能蛋白质,是蛋白质合成过程中的关键,是一种重要的抗原。很少有研究讨论这种蛋白质在布鲁氏菌物种中的作用,这种蛋白质的表位尚未被报道。这里,我们描述了一种单克隆抗体(McAb),BD6,用于布鲁氏菌的EF-Tu。使用涉及一系列部分重叠的重组EF-Tu截短肽的蛋白质印迹,一个新的线性B细胞表位,110QTREHIL116(EF),已确定。丙氨酸扫描诱变显示残基Q110、T111、R112、I115和L116是参与识别的核心残基。序列比对表明表位肽在细菌物种中是保守的,但与宿主序列相差一个氨基酸残基(I115)。表位肽被感染B.melitensis的小鼠血清识别,而重组表位肽诱导了强烈的体液免疫应答,相应的小鼠肽,QTREHLL,没有。这些结果表明I115可能是宿主免疫系统区分细菌和自身表位EF序列的关键残基。间接免疫荧光和蛋白质印迹实验表明表位肽可用于酿酒酵母,人胚肾细胞(HEK-293),和鸡成纤维细胞(DF1)表达系统和免疫沉淀测定。一起,我们的结果表明,McAbBD6是进一步研究EF-Tu蛋白在病原体-宿主相互作用中的潜在功能的有用工具,并且表位标签可用于作为新型亲和标签来识别其他细菌病原体,特别便于细胞内细菌的鉴定。
    Elongation factor thermo-unstable (EF-Tu), an abundant multifunctional protein, is pivotal during protein synthesis and is an important antigen. Few studies have addressed the role of this protein in Brucella species, and the epitopes of this protein have not been reported. Here, we describe a monoclonal antibody (McAb), BD6, for EF-Tu in Brucella melitensis. Using western blotting involving a series of partially overlapping recombinant EF-Tu truncation peptides, a novel linear B-cell epitope, 110QTREHIL116 (EF), was identified. Alanine-scanning mutagenesis revealed that residues Q110, T111, R112, I115, and L116 were core residues involved in recognition. Sequence alignment suggested that the epitope peptide was conserved among bacterial species but differed by one amino acid residue (I115) from the host sequence. The epitope peptide was recognized by sera from B. melitensis-infected mice, and while recombinant epitope peptide induced a strong humoral immune response, the corresponding mouse peptide, QTREHLL, did not. These results suggested that I115 may be the key residue for the host immune system to distinguish between bacterial and self epitope EF sequences. Indirect immunofluorescence and western blotting assays showed that epitope peptide could be used in Saccharomyces cerevisiae, human embryonic kidney cell (HEK-293), and chicken fibroblast cell (DF1) expression systems and immunoprecipitation assay. Together, our results suggested that the McAb BD6 is a useful tool for further investigation of the potential functions of the EF-Tu protein in pathogen-host interactions, and that the epitope tag may be useful for application as a novel affinity tag to identify other bacterial pathogens, especially convenient for the identification of intracellular bacteria.
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  • 文章类型: Journal Article
    The unique dependence of cancer cells on mitochondrial metabolism has been exploited therapeutically in various cancers but not osteosarcoma. In this work, we demonstrate that inhibition of mitochondrial translation is effective and selective in targeting osteosarcoma. We firstly showed that tigecycline at pharmacological achievable concentrations inhibited growth and induced apoptosis of multiple osteosarcoma cell lines while sparing normal osteoblast cells. Similarly, tigecycline at effective doses that delayed osteosarcoma growth did not cause significant toxicity to mice. We next showed that tigecycline specifically inhibits mitochondrial translation, resulting in defective mitochondrial respiration in both osteosarcoma and normal osteoblast cells. We further confirm mitochondrial respiration as the target of tigecycline using three independent approaches. In addition, we demonstrate that compared to normal osteoblasts, osteosarcoma cells have higher mitochondrial biogenesis. We finally show that specific inhibition of mitochondrial translation via EF-Tu depletion produces the similar anti-osteosarcoma effects of tigecycline. Our work highlights the therapeutic value of targeting mitochondrial metabolism in osteosarcoma and tigecycline as a useful addition to the treatment of osteosarcoma.
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  • 文章类型: Journal Article
    叶绿体是半自主的细胞器,在进化过程中保留自己的基因组和基因表达装置,但受细胞核基因组编码的蛋白质因子控制。分析FtsH介导的拟南芥叶绿体发育的遗传调控网络,已鉴定出一组黄色杂色(var2)的抑制突变体。在这项研究中,我们报道了另一个新的var2抑制基因座的鉴定,变体11(SVR11)的抑制剂,编码假定的叶绿体定位的原核类型翻译延伸因子EF-Tu。SVR11可能是叶绿体发育和植物生存所必需的。GUS活性表明SVR11在幼叶组织中含量丰富,侧根,和根尖。有趣的是,我们发现SVR11和SVR9共同调节叶片发育,包括叶缘发育和子叶张数模式。这些发现加强了这样的观念,即叶绿体翻译状态触发逆行信号不仅调节叶绿体发育,而且调节叶片发育。
    Chloroplasts are semiautonomous organelles, retaining their own genomes and gene expression apparatuses but controlled by nucleus genome encoded protein factors during evolution. To analyze the genetic regulatory network of FtsH-mediated chloroplast development in Arabidopsis, a set of suppressor mutants of yellow variegated (var2) have been identified. In this research, we reported the identification of another new var2 suppressor locus, SUPPRESSOR OF VARIEGATION11 (SVR11), which encodes a putative chloroplast-localized prokaryotic type translation elongation factor EF-Tu. SVR11 is likely essential to chloroplast development and plant survival. GUS activity reveals that SVR11 is abundant in the juvenile leaf tissue, lateral roots, and root tips. Interestingly, we found that SVR11 and SVR9 together regulate leaf development, including leaf margin development and cotyledon venation patterns. These findings reinforce the notion that chloroplast translation state triggers retrograde signals regulate not only chloroplast development but also leaf development.
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  • 文章类型: Journal Article
    猪肺炎支原体是一种定殖性呼吸道病原体,可给世界养猪业造成巨大的经济损失。虽然已经报道了推定的毒力因子,该物种的发病机理尚不清楚。这里,我们用猪肺炎支原体168毒株感染猪气管上皮细胞(STEC),通过双向电泳(2-DE)鉴定感染相关因子.获得猪肺炎支原体的全蛋白并与在肉汤中培养的样品进行比较。成功鉴定出细胞感染组中丰度增加≥1.5的六种差异表达蛋白。毒力相关蛋白的String网络表明,所有6种差异丰度蛋白都与猪肺炎支原体的毒力有关。这个网络中最重要的上调集线器之一,延伸率热不稳定(EF-Tu),在猪肺炎支原体感染的STEC中显示出相对较高的表达,并在质谱上获得了较高的分数,因此成功重组。除了其在蛋白质合成中的典型酶活性外,还报道EF-Tu作为许多其他病原体中的重要粘附素位于细胞表面。然后用流式细胞术在猪肺炎支原体中观察EF-Tu的细胞表面位置。发现重组EF-Tu(rEF-Tu)能够粘附于STEC,并且包含猪肺炎支原体的抗rEF-Tu抗体降低了对STEC的粘附。此外,表面等离子体共振(SPR)分析表明,rEF-Tu可以与纤连蛋白结合,具有特异性和中等强度的相互作用,解离常数(KD)为605nM。此外,STEC中纤连蛋白的阻断也降低了猪肺炎支原体与细胞表面的结合。总的来说,这些数据表明EF-Tu是猪肺炎支原体的重要粘附素,而纤连蛋白是STEC上不可或缺的受体。EF-Tu与纤连蛋白之间的结合有助于猪肺炎支原体与STEC的粘附。热不稳定的延长因子(EF-Tu)存在于猪肺炎支原体的细胞表面。EF-Tu月光作为猪肺炎支原体的粘附素。EF-Tu的粘附作用部分由纤连蛋白介导。
    Mycoplasma hyopneumoniae is a colonizing respiratory pathogen that can cause great economic losses to the pig industry worldwide. Although putative virulence factors have been reported, the pathogenesis of this species remains unclear. Here, we used the virulent M. hyopneumoniae strain 168 to infect swine tracheal epithelial cells (STEC) to identify the infection-associated factors by two-dimensional electrophoresis (2-DE). Whole proteins of M. hyopneumoniae were obtained and compared with samples cultured in broth. Six differentially expressed proteins with an increase in abundance of ≥1.5 in the cell infection group were successfully identified. A String network of virulence-associated proteins showed that all the six differential abundance proteins were involved in virulence of M. hyopneumoniae. One of the most important upregulated hubs in this network, elongation factor thermo unstable (EF-Tu), which showed a relatively higher expression in M. hyopneumoniae-infected STEC and obtained a higher score on mass spectrometry was successfully recombined. In addition to its canonical enzymatic activities in protein synthesis, EF-Tu was also reported to be located on the cell surface as an important adhesin in many other pathogens. The cell surface location of EF-Tu was then observed in M. hyopneumoniae with flow cytometry. Recombinant EF-Tu (rEF-Tu) was found to be able to adhere to STEC and anti-rEF-Tu antibody enclosed M. hyopneumoniae decreased adherence to STEC. In addition, surface plasmon resonance (SPR) analysis showed that rEF-Tu could bind to fibronectin with a specific and moderately strong interaction, a dissociation constant (KD) of 605 nM. Furthermore, the block of fibronectin in STEC also decreased the binding of M. hyopneumoniae to the cell surface. Collectively, these data imply EF-Tu as an important adhesin of M. hyopneumoniae and fibronectin as an indispensable receptor on STEC. The binding between EF-Tu with fibronectin contributes to the adhesion of M. hyopneumoniae to STEC. HIGHLIGHTS Elongation factor thermo unstable (EF-Tu) exists on the cell surface of M. hyopneumoniae.EF-Tu moonlights as an adhesin of M. hyopneumoniae.The adhesive effect of EF-Tu is partly meditated by fibronectin.
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  • 文章类型: Journal Article
    Vaccine development efforts against Streptococcus suis serotype 2 (S. suis 2) are often constrained by strain/serotype antigen variability. Bioinformatics analyses revealed two highly conserved S. suis 2 factors, EF-Tu and FtsZ. Murine immunization with recombinant proteins emulsified in white oil adjuvant or eukaryotic DNA vaccine vectors provided significant protection against lethal S. suis 2 challenge. Immune responses elicited by recombinant protein immunization revealed the robust generation of humoral immune responses, with a mixed induction of Th1-type and Th2-type responses. Furthermore, the antiserum from mice immunized with recombinant proteins significantly inhibited the growth of S. suis 2 in healthy pig whole blood, suggesting the triggering of a strong opsonizing response. Histological examination found that immunizing mice with purified recombinant proteins reduced neutrophil and macrophage accumulation in brain and lung tissues after challenge with virulent S. suis. Taken together, these findings reveal that EF-Tu and FtsZ may be promising targets for subunit and DNA vaccine candidates against S. suis 2 infection.
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  • 文章类型: Journal Article
    线粒体蛋白质翻译的功能重要性最近已在各种癌症而不是肾细胞癌(RCC)的背景下得到证明。根据这些努力,我们的工作表明,替加环素对线粒体翻译的抑制或EF-Tu线粒体翻译因子的缺失可有效靶向RCC,并显著提高RCC对化疗的敏感性.我们表明抗生素替加环素抑制RCC的多种生物学功能,包括增长,集落的形成和生存。它还显著增强紫杉醇在RCC中的体外和体内功效。替加环素优先抑制线粒体DNA编码蛋白的翻译,含有线粒体编码亚基的线粒体呼吸复合物的活性。作为线粒体呼吸链抑制的结果,在暴露于替加环素的RCC细胞中观察到线粒体呼吸减少。相比之下,替加环素在缺乏线粒体DNA和随后的线粒体呼吸的RCCρ0细胞中无效,进一步证实线粒体翻译抑制是替加环素在RCC中的作用机制。重要的是,EF-Tu敲除对线粒体翻译的遗传抑制再现了替加环素的抑制作用。最后,我们显示了线粒体翻译抑制与PI3K/Akt/mTOR信号通路抑制之间的关联。我们的工作使用药理学和遗传学策略来证明线粒体翻译在RCC中的重要作用,并强调了使RCC对化疗敏感的治疗价值。
    The functional importance of mitochondrial protein translation has been recently documented in the context of various cancers but not renal cell carcinoma (RCC). In lines with these efforts, our work demonstrates that mitochondrial translation inhibition by tigecycline or depletion of EF-Tu mitochondrial translation factor effectively targets RCC and significantly sensitizes RCC response to chemotherapy. We show that antibiotic tigecycline inhibits multiple biological functions of RCC, including growth, colony formation and survival. It also significantly enhances in vitro and in vivo efficacy of paclitaxel in RCC. Tigecycline preferentially inhibits translation of mitochondrial DNA-encoded proteins, activities of mitochondrial respiratory complexes that contain mitochondrially encoded subunits. As a consequence of mitochondrial respiratory chain inhibition, decreased mitochondrial respiration is observed in RCC cells exposed to tigecycline. In contrast, tigecycline is ineffective in RCC ρ0 cells that lack mitochondrial DNA and subsequent mitochondrial respiration, further confirm mitochondrial translation inhibition as the mechanism of tigecycline\'s action in RCC. Importantly, genetic inhibition of mitochondrial translation by EF-Tu knockdown reproduced the inhibitory effects of tigecycline. Finally, we show the association between mitochondrial translation inhibition and suppression of PI3K/Akt/mTOR signaling pathway. Our work used pharmacological and genetic strategies to demonstrate the important roles of mitochondrial translation in RCC and emphasize the therapeutic value of sensitizing RCC to chemotherapy.
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