variant of uncertain significance

不确定意义的变体
  • 文章类型: Case Reports
    嗜铬细胞瘤(PCCs)和副神经节瘤(PGLs)代表由肾上腺髓质和肾上腺交感神经副神经节的嗜铬细胞引起的肿瘤。分别。PCCs通常产生一种或多种儿茶酚胺(肾上腺素,去甲肾上腺素,和多巴胺),但它们很少在生物化学上沉默。另一方面,PGL,一般不产生儿茶酚胺。它们在所有肾上腺肿瘤中具有最高的遗传性,并且已知与基因突变有关。与散发性疾病相比,遗传性肿瘤患者通常年龄较小,并且患有多灶性疾病。特定的基因突变已经与涉及PCC/PGL的遗传性综合征很好地确定。进一步的研究旨在鉴定其他突变并描绘与这些突变相关的特定表型。一名34岁的妇女在腹腔镜阑尾切除术后接受评估,该切除术在最终病理上鉴定出4厘米高分化的神经内分泌肿瘤。进一步的检查包括重复CT扫描,然后进行DotatatePETCT扫描,该扫描显示与左肾上腺相关的大的(7.3x5.8cm)主动脉周围肿块。肾上腺功能检查为阴性,她的嗜铬粒蛋白A水平为679ng/mL。她确实报告了间歇性胸闷和心悸,但无症状。患者随后进行了剖腹探查术,左肾上腺切除术和邻近的肿瘤切除术,并完成了右半结肠切除术和回结肠吻合术。手术病理显示两个与多灶性PCC一致的不同肿块。结肠切除标本中未发现残留肿瘤,24枚淋巴结阴性。她恢复顺利,基因检测显示POLE和VHL基因具有不确定意义。她已经接受了遗传咨询,并将参加适当的监测方案。
    Pheochromocytomas (PCCs) and paragangliomas (PGLs) represent tumors arising from chromaffin cells of the adrenal medulla and extra-adrenal sympathetic paraganglia, respectively. PCCs commonly produce one or more catecholamines (epinephrine, norepinephrine, and dopamine), but rarely are they biochemically silent. PGLs on the other hand, generally do not produce catecholamines. They have the highest heritability of all adrenal tumors and are known to be associated with genetic mutations. Patients with hereditary tumors typically present at a younger age and with multifocal disease when compared to sporadic disease. Specific genetic mutations have been well established with hereditary syndromes involving PCC/PGLs. Further research has aimed to identify other mutations and delineate specific phenotypes associated with these mutations. A 34-year-old woman presented for evaluation following a laparoscopic appendectomy that identified a 4-cm well-differentiated neuroendocrine tumor on final pathology. Further work-up included a repeat CT scan followed by a Dotatate PET CT scan which revealed a large (7.3 x 5.8 cm) periaortic mass related to the left adrenal gland. Functional adrenal work-up was negative and her Chromogranin A level was 679 ng/mL. She did report intermittent chest tightness and palpitations but was otherwise asymptomatic. The patient subsequently underwent an exploratory laparotomy with left adrenalectomy and adjacent tumor resection as well as completion of right hemicolectomy with ileocolonic anastomosis. Surgical pathology revealed two distinct masses consistent with multifocal PCC. No residual tumor was found in the colectomy specimen and 24 lymph nodes were negative. She had an uneventful recovery and genetic testing showed a variant of uncertain significance for the POLE and VHL genes. She has received genetic counseling and will be enrolled in an appropriate surveillance protocol.
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  • 文章类型: Case Reports
    全外显子组测序是围产期诊断中不断发展的技术,其允许鉴定否则将不确定的遗传病因。在这个案例报告中,一位38岁的西班牙裔女性,G5P3013,具有单绒毛膜羊膜双胎妊娠,其中一名胎儿在产前超声和脑部磁共振成像(MRI)上显示出明显的颅骨异常。胎儿异常包括双侧脑室增宽,透明隔腔缺失,并且没有call体。诊断性羊膜穿刺术与染色体分析,染色体微阵列,甲胎蛋白,巨细胞病毒,弓形虫病,细小病毒结果正常。异常胎儿的全外显子组测序在钙/钙调蛋白依赖性丝氨酸蛋白激酶(CASK)基因中检测到不确定意义的从头镶嵌变体(VUS):c.1963A>G(p。Asn655Asp)。这种变异在正常的双胞胎胎儿中不存在,母亲,和父亲。致病性CASK基因突变与三种综合征相关:FG综合征4,智力发育障碍和小头症伴脑桥和小脑发育不全(MICPCH),有或没有眼球震颤的智力发育障碍。全外显子组测序确定了检测到的异常的潜在病因。该变体可能是从头出现的,并且是该单绒毛膜双胎妊娠的一个胎儿中确定的颅骨异常的潜在原因。当标准诊断测试是非贡献性的时,全外显子组测序可以提供额外的诊断效用。
    Whole-exome sequencing is an evolving technology in perinatal diagnosis which allows identification of genetic etiologies that would otherwise go undetermined. In this case report, a 38-year-old Hispanic woman, G5P3013, with a monochorionic diamniotic twin gestation with one fetus displaying significant cranial abnormalities on prenatal ultrasound and magnetic resonance imaging (MRI) of the brain is presented. Fetal anomalies included bilateral ventriculomegaly, absent cavum septum pellucidum, and absent corpus callosum. Diagnostic amniocentesis with chromosome analysis, chromosomal microarray, alpha-fetoprotein, cytomegalovirus, toxoplasmosis, and parvovirus had normal results. Whole-exome sequencing for the anomalous fetus detected a de novo mosaic variant of uncertain significance (VUS) in the calcium/calmodulin dependent serine protein kinase (CASK) gene: c.1963 A > G (p.Asn655Asp). This variant was absent in the normal twin fetus, the mother, and the father. Pathogenic CASK gene mutations are associated with three syndromes: FG syndrome 4, intellectual developmental disorder and microcephaly with pontine and cerebellar hypoplasia (MICPCH), and intellectual developmental disorder with or without nystagmus. Whole-exome sequencing identified a potential etiology for the anomalies detected. The variant likely arose de novo and was the potential cause of the identified cranial abnormalities in one fetus of this monochorionic diamniotic twin gestation. Whole-exome sequencing may provide additional diagnostic utility when standard diagnostic testing is noncontributory.
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  • 结节性硬化症(TSC)是一种常染色体显性遗传性疾病,可涉及多器官系统。诊断基于独立的临床诊断标准和遗传诊断标准(TSC1和TSC2基因的致病变异)。在有症状或无症状的患者以及具有不确定意义的遗传变异(VUS)的患者中,做出明确的诊断尤其困难。早期诊断和终身监测对于避免发病和潜在危及生命的并发症至关重要。为了提高诊断灵敏度,鲜为人知的TSC表现可能会有所帮助。在此,我们展示了一个案例,其中SBL被用作诊断线索,以帮助诊断三代在TSC1中携带VUS的少症状TSC。SBL通常在TSC患者的影像学研究中检测到,最近已被纳入作为次要的临床诊断标准。临床医生和放射科医生应该意识到它们的重要性,因为它们可能被误认为是成骨细胞转移。
    Tuberous sclerosis complex (TSC) is an autosomal dominant genetic disorder that can involve multiple organ systems. Diagnosis is based on independent clinical diagnostic criteria and genetic diagnostic criteria (pathogenic variants on TSC1 and TSC2 genes). To make a definitive diagnosis can be especially difficult in oligosymptomatic or asymptomatic patients and in those patients with genetic variants of uncertain significance (VUS). Early diagnosis and lifelong surveillance are paramount to avoid morbidity and potentially life-threatening complications. To increase diagnostic sensibility, less known manifestations of TSC can be helpful. Herein we show a case in which SBLs were used as a diagnostic clue to help diagnose three generations of oligosymptomatic TSC carrying a VUS in TSC1. SBLs are commonly detected in imaging studies of patients with TSC and have been recently included as a minor clinical diagnostic criterion. Clinicians and radiologists should be aware of their significance as they can be mistaken with osteoblastic metastases.
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  • 文章类型: Case Reports
    暂无摘要。
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  • 文章类型: Case Reports
    报告IQCB1相关的Leber先天性黑蒙和NDP相关的家族性渗出性玻璃体视网膜病变(FEVR)的并发表现和管理。
    一名6个月大的白种人婴儿视觉反应不佳,高远视眼,和婴儿眼球震颤,根据临床发现暂时诊断为Leber先天性黑蒙。使用285基因视网膜营养不良面板(蓝图遗传学)进行遗传咨询和测试。临床特征,介绍,辅助测试结果,和管理进行了描述。
    在ICQB1中鉴定出两个先前报道的杂合致病变体(c.1518_1519del(p。His506Glnfs*13)和c.1381C>T,p.Arg461*)反式分离。此外,在NDP中发现了不确定显著性(VUS)的变化(c.280C>T;p.His94Tyr)。进行荧光素血管造影术,显示外周血管无血管化和视网膜毛细血管扩张,无明显的新生血管形成。外周消融激光应用于无血管区。
    除了视网膜变性外,考虑到FEVR表型,NDPVUS可能代表一种致病变异,创造了一种罕见的双重表型。IQCB1相关的视网膜变性和NDP变异的低氧需求的组合可能导致更减弱的FEVR表现,预后不确定。分子诊断告知眼部和肾脏监测,以及未来后代的复发风险。
    To report the concurrent presentation and management of IQCB1-associated Leber Congenital Amaurosis and NDP-associated Familial Exudative Vitreoretinopathy (FEVR).
    A 6-month-old Caucasian infant presented with poor visual response, high hypermetropia, and infantile-nystagmus with a provisional diagnosis of Leber Congenital Amaurosis based on clinical findings. Genetic counseling and testing were performed with a 285 gene retinal dystrophy panel (Blueprint Genetics). Clinical characteristics, presentation, ancillary testing results, and management are described.
    Two previously reported heterozygous pathogenic variants in ICQB1 were identified (c.1518_1519del (p.His506Glnfs*13) and c.1381C>T, p.Arg461*) segregating in trans. In addition, a variation of uncertain significance (VUS) was found in NDP (c.280C>T; p.His94Tyr). Fluorescein angiography was performed demonstrating peripheral avascularity and retinal telangiectasia without frank neovascularization. Peripheral ablative laser was applied to the avascular zone.
    The NDP VUS likely represents a pathogenic variant given the FEVR phenotype in addition to retinal degeneration, creating a rare dual phenotype. The combination of low oxygen demand from the IQCB1-associated retinal degeneration and NDP variant may have led to a more attenuated FEVR presentation with uncertain prognosis. A molecular diagnosis informed ocular and renal surveillance, as well as the recurrence risk for future offspring.
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  • 文章类型: Case Reports
    Donnel-Luria-Rodan(ODLURO)综合征是一种常染色体显性遗传的神经发育障碍。它在男性生命的第一个十年中更频繁地出现,并且与发育迟缓有关,智商低,自闭症谱系障碍样行为,癫痫,说话延迟,侵略,面部和骨骼畸形,胃肠道症状和低张力。虽然很少有案例被记录在案,看来表型谱可能会有所不同,尤其是在两个生物性别之间。本研究报告了一例5岁的男性患者,该患者在4岁时使用全外显子组测序被诊断为ODLURO。分子分析确定了赖氨酸甲基转移酶2E(无活性)(KMT2E)基因的新突变,被归类为一个未知意义的变体。父亲,表现为非特异性和未诊断的精神病表现,呈现相同的KMT2E变体。本研究中描述的病例不仅有趣,因为文献中描述的病例<40,还因为KMT2E基因的新遗传突变,在父亲和儿子身上,这导致了不同的表型表现。
    O\'Donnel-Luria-Rodan (ODLURO) syndrome is a neurodevelopmental disorder with autosomal dominant inheritance. It appears more frequently in males during the first decade of life and is associated with developmental delay, low intelligence quotient, autism spectrum disorder-like behavior, epilepsy, speech delay, aggression, facial and skeletal deformities, gastrointestinal symptoms and hypotonia. Although few cases have been documented, it appears that the phenotype spectrum may vary, especially between the two biological sexes. The present study reported a case of a 5-year-old male patient who was diagnosed with ODLURO at the age of 4 years using whole-exome sequencing. Molecular analysis identified a new mutation in the lysine methyltransferase 2E (inactive) (KMT2E) gene, which was classified as a variant with unknown significance. The father, who presented with non-specific and undiagnosed psychiatric manifestations, presented the same KMT2E variant. The case described in the present study is not only interesting because there are <40 cases described in the literature, but also because a new inherited mutation in the KMT2E gene, present in both father and son, that resulted in different phenotypic manifestations was identified.
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  • 文章类型: Case Reports
    TP53 mutations in acute myeloid leukemia (AML) are associated with poor outcomes. The number of somatic and/or germline genetic tests for therapy is increasing. Patients with such incidental findings should undergo adequate genetic counseling.
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  • 文章类型: Case Reports
    The influence of BRCA1/2 variants of uncertain significance (VUSs) on the cancer risk and their association with the response to treatment is uncertain. The aim of the present study was to evaluate the role of BRCA VUS in patients with breast cancer. A total of two cases of breast cancer patients with the BRCA VUS were described. The complete coding sequence of BRCA1/2 genes was analyzed from the genomic DNA material by next generation sequencing on the Ion Torrent platform. The presence of c.3454G>A (p.Asp1152Asn) VUS in the BRCA1 gene was reported in a 64-year-old woman with invasive breast carcinoma. The characteristics of the breast tumors were the following: moderately differentiated-intermediate grade (NG-2 G-2), HER2 (+), estrogen receptor (ER) (+++), progesterone receptor (PR) (+++), luminal A subtype and pT2 N1a Mx. The second detected VUS was the c.2374T>C (p.Tyr792His) variant in the BRCA2 gene. This variant was reported in a 33-year-old woman who was diagnosed with right breast cancer (cT2N1M0). The invasive breast carcinoma was characterized as follows: NG-2 G-2, ER (+++), PR (+++), Ki-67 10%, HER2 (+++) and luminal B subtype. The data demonstrated that patients with VUSs should be managed based on their family history of cancer and clinicopathological characteristics. The clinical significance of the VUS in BRCA1/2 may change over time and reclassification of the variant to \'pathogenic\' or \'benign\' should be undertaken. Patients with VUS should be followed up regularly.
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  • 文章类型: Journal Article
    Sudden cardiac death (SCD) in adolescents and young adults is a major traumatic event for families and communities. In these cases, it is not uncommon to have a negative autopsy with structurally and histologically normal heart. Such SCD cases are generally attributed to channelopathies, which include long QT syndrome, short QT syndrome, Brugada syndrome, and catecholaminergic polymorphic ventricular tachycardia. Our understanding of the causes for SCDs has changed significantly with the advancements in molecular and genetic studies, where many mutations are now known to be associated with certain channelopathies. Postmortem analysis provides great value in informing decision-making with regard to screening tests and prophylactic measures that should be taken to prevent sudden death in first degree relatives of the decedent. As this is a rapidly advancing field, our ability to identify genetic mutations has surpassed our ability to interpret them. This led to a unique challenge in genetic testing called variants of unknown significance (VUS). VUSs present a diagnostic dilemma and uncertainty for clinicians and patients with regard to next steps. Caution should be exercised when interpreting VUSs since misinterpretation can result in mismanagement of patients and their families. A case of a young adult man with drowning as his proximate cause of death is presented in circumstances where cardiac genetic testing was indicated and undertaken. Eight VUSs in genes implicated in inheritable cardiac dysfunction were identified and the interpretation of VUSs in this scenario is discussed.
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  • 文章类型: Case Reports
    青少年粒单核细胞白血病(JMML)的遗传变化决定了不同的亚型,治疗,和结果。具有种系CBL突变和体细胞NRAS突变的JMML可能实现自发缓解,但造血干细胞移植适用于JMML的其他亚型。我们在此报告一个患有JMML的孩子,该孩子同时具有种系CBL突变(c.1111T>C)和NF1变体(c.3352A>G)。经过评估,我们认为NF1变种不是主要贡献者.经过一年的观察,该病例没有疾病进展的迹象。这个案例强调了结合现有证据和临床发现在照顾具有异常基因组变异的患者中的重要性。
    Genetic changes in juvenile myelomonocytic leukemia (JMML) determine distinct subtypes, treatments, and outcomes. JMML with germline CBL mutation and somatic NRAS mutation possibly achieves spontaneous remission, but hematopoietic stem cell transplantation is indicated for other subtypes of JMML. We hereby report a child with JMML harboring a germline CBL mutation (c.1111T>C) and an NF1 variant (c.3352A>G) concurrently. After evaluation, we considered that the NF1 variant was not the major contributor. After one year of observation, this case had no signs of disease progression. This case highlights the importance of combining available evidence and clinical findings in caring for patients with unusual genomic variations.
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