traceability

可追溯性
  • 文章类型: Journal Article
    数字产品护照(DPP)作为特定于产品的数据集,是一种功能强大的工具,可提供有关产品来源或组成的信息,并提高透明度和可追溯性。这个回收案例研究伴随着2192只飞盘的生产,起源于收集的饮料瓶盖。总的来说,通过DPP收集486.7kg原料并将其转化为363.2kg最终产品,并通过所有工艺步骤验证了可追溯性,由R-Cycle倡议提供,并基于GS1标准。这需要一个普遍同意的数据集,技术基础设施的可用性,以及处理步骤中收集和处理数据的额外工作。R-Cycle提供了一个单层DPP,其中数据结构是精简的,每个人都可以看到信息。在透明度方面,这对各种利益相关者都是有益的。然而,它不允许共享敏感信息。一方面,DPP很有可能成为客户参与的推动者,原产地验证,或作为更有效和先进的塑料回收的起点。另一方面,DPP涉及在数据生成和处理方面的一定努力,这必须以利益为理由。对于小,简单的包装物品,民进党可能不是所有问题的完美解决方案。然而,有了更广泛的社会心态和立法推动,DPP可以成为广泛使用和可信的声明工具。这可以支持塑料行业走向循环经济。
    The Digital Product Passport (DPP) as a product-specific data set is a powerful tool that provides information on the origin or composition of products and increases transparency and traceability. This recycling case study accompanies the production of 2192 frisbees, which originated from collected beverage bottle caps. In total, 486.7 kg of feedstock was collected and transformed into 363.2 kg of final product with verified traceability through all process steps via a DPP, provided by the R-Cycle initiative and based on the GS1 standard. This demanded a generally agreed dataset, the availability of technical infrastructure, and additional effort in the processing steps to collect and process the data. R-Cycle offers a one-layer DPP where the data structure is lean and information is visible to everyone. This is beneficial to a variety of stakeholders in terms of transparency. However, it does not allow the sharing of sensitive information. On the one hand, the DPP has a high potential to be an enabler for customer engagement, origin verification, or as a starting point for more efficient and advanced recycling of plastics. On the other hand, the DPP involves a certain effort in data generation and handling, which must be justified by the benefits. For small, simple packaging items, the DPP may not be the perfect solution for all problems. However, with a broader societal mindset and legislative push, the DPP can become a widely used and trusted declaration tool. This can support the plastics industry in its journey towards a circular economy.
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  • 文章类型: Journal Article
    区块链通过透明度和公平的利益相关者参与来彻底改变供应链和物流的潜力是巨大的。然而,可扩展性等挑战,隐私,和互操作性持续存在。这项研究探讨了供应链和物流中现实世界区块链实施的稀缺性,因为我们没有目睹该领域中许多基于区块链的解决方案的现实部署。对此感到困惑,我们整合技术,用户体验,和运营效率,照亮区块链整合的复杂格局。我们在三个用例中介绍了基于区块链的解决方案,将它们与替代设计进行比较,并从技术角度进行分析,经济,和操作方面。来自针对从业者和专家的50个问题的量身定制问卷的见解提供了有关区块链采用的关键观点。我们的工作中的一个关键发现表明,接受采访的公司中有一半同意,如果他们不投资区块链技术,他们将错过竞争优势的潜力。61%的受访公司声称,他们的客户要求在供应链相关交易中提高透明度。然而,只有三分之一的公司知道区块链技术的主要特征,这表明公司缺乏知识,这可能导致供应链用例中区块链适应性较弱。我们的读者应该注意到,我们的研究是在荷兰资助的国家项目中进行的。我们希望研究人员以及供应链和物流领域的利益相关者能够从我们的工作中受益。
    Blockchain\'s potential to revolutionize supply chain and logistics with transparency and equitable stakeholder engagement is significant. However, challenges like scalability, privacy, and interoperability persist. This study explores the scarcity of real-world blockchain implementations in supply chain and logistics since we have not witnessed many real-world deployments of blockchain-based solutions in the field. Puzzled by this, we integrate technology, user experience, and operational efficiency to illuminate the complex landscape of blockchain integration. We present blockchain-based solutions in three use cases, comparing them with alternative designs and analyzing them in terms of technical, economic, and operational aspects. Insights from a tailored questionnaire of 50 questions addressed to practitioners and experts offer crucial perspectives on blockchain adoption. One of the key findings from our work shows that half of the companies interviewed agree that they will miss the potential for competitive advantage if they do not invest in blockchain technology, and 61% of the companies surveyed claimed that their customers ask for more transparency in supply chain-related transactions. However, only one-third of the companies were aware of the main features of blockchain technology, which shows a lack of knowledge among the companies that may lead to a weaker blockchain adaption in supply chain use cases. Our readers should note that our study is specifically contextualized in a Netherlands-funded national project. We hope that researchers as well as stakeholders in supply chain and logistics can benefit from the insights of our work.
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  • 文章类型: English Abstract
    目的:评价脉冲场凝胶电泳(PFGE)三种分子分型方法的相关性,重复基因外回文(REP)-PCR和超细菌重复基因间共识(ERIC)-PCR,并探索菌株之间的遗传关系,结合血清型分析,进一步了解辽宁省副溶血性弧菌的分布和流行趋势。
    方法:血清分型,PFGE,REP-PCR,对2018年辽宁省150株VP分离株进行ERIC-PCR分子分型和聚类分析。
    结果:118个分离株可分为14个血清型,32个分离株无法分类。主要血清型为O3、O1和O2。PFGE的分辨率(DI)为0.969,REP-PCR的分辨率(DI)为0.948,ERIC-PCR的分辨率(DI)为0.927。血清型O3组菌株与O1组菌株的分子类型高度相似。
    结论:2018年,辽宁省临床VP分离株流行血清型仍为O3:K6,食品VP分离株流行血清型仍为O2。PFGE的结果,REP-PCR,ERIC-PCR分型方法是一致的,PFGE分型法的分辩率和重现性均优于其他两种分型法。血清型O3组与O1组密切相关。
    OBJECTIVE: To evaluate the correlation among the three molecular typing method of pulsed field gel electrophoresis(PFGE), repetitive extragenic palindromic(REP)-PCR and en-terobacterial repetitive intergenic consensus(ERIC)-PCR, and to explore the genetic relationship among strains, and to further understand the distribution and epidemic trend of Vibrio parahaemolyticus in Liaoning Province by combining Serotype analysis.
    METHODS: Serum typing, PFGE, REP-PCR, and ERIC-PCR molecular typing and cluster analysis were performed on 150 VP isolates from Liaoning Province in 2018.
    RESULTS: 118 isolates could be divided into 14 Serotype, and 32 isolates could not be classified. The main serotypes were O3, O1 and O2. The resolution(DI) of PFGE is 0.969, the resolution(DI) of REP-PCR is 0.948, and the resolution(DI) of ERIC-PCR is 0.927. The Serotype O3 group strains are highly similar to the molecular types of O1 group strains.
    CONCLUSIONS: In 2018, the epidemic Serotype of clinical VP isolates in Liaoning Province is still O3: K6, and the epidemic serotype of food VP isolates is still O2. The result of PFGE, REP-PCR, and ERIC-PCR typing method are consistent, and the resolution and reproducibility of PFGE typing method are superior to the other two method. The Serotype O3 group is closely related to O1 group.
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  • 文章类型: Journal Article
    背景:对数字健康记录的二级调查,包括来自德国医疗数据集成中心(DIC)的电子患者数据,为加强未来的病人护理铺平道路。然而,仅捕获有关完整性的有限信息,可追溯性,和(敏感)数据元素的质量。这种缺乏细节降低了对收集数据有效性的信任。从技术角度来看,坚持广泛接受的公平(Findability,可访问性,互操作性,和可重用性)的数据管理原则需要使用与来源相关的元数据来丰富数据。Provenance提供了对数据元素重用的准备情况的见解,并作为数据治理的提供者。
    目的:本研究的主要目的是增加医学DIC中临床常规数据的可重用性,以便在临床研究中进行二次利用。我们的目标是建立来源跟踪,以支持数据完整性的状态,可靠性,因此,信任电子健康记录,从而加强医疗DIC的问责制。作为第一步,我们介绍了整合国际标准的概念验证来源库的实施。
    方法:我们坚持为出处框架定制的路线图,并检查了整个ETL的数据集成步骤(提取,变换,和负载)阶段。在成熟度模型之后,我们得出了来源库的要求。使用这种研究方法,我们制定了一个具有相关元数据的来源模型,并实现了一个概念证明来源类。此外,我们无缝地整合了国际公认的万维网联盟(W3C)出处标准,将生成的来源记录与可互操作的医疗保健标准FastHealthcareInteroperabilityResources保持一致,并以各种表示格式呈现。最终,我们对来源追踪测量进行了全面评估。
    结果:这项研究标志着在德国医学DIC中在数据元素级别首次实现了集成来源追踪。我们设计并执行了一种实用的方法,该方法可以协同实现质量和健康标准指导(元)数据管理实践的稳健性。我们的测量表明管道执行时间值得称赞,在处理临床常规数据时达到显著的准确性和可靠性水平,从而确保医疗DIC的问责制。这些发现应激发开发其他工具,旨在提供基于证据的可靠电子健康记录服务供二次使用。
    结论:为概念来源证明类概述的研究方法已精心设计,以促进有效和可靠的核心数据管理实践。它旨在通过赋予有意义的来源来增强生物医学数据,从而增强研究和社会的利益。此外,它促进了生物医学数据的简化重用。因此,该系统降低了风险,因为不了解所有数据元素的起源和质量的数据分析是徒劳的。虽然该方法最初是为医疗DIC用例开发的,这些原则可以普遍适用于整个科学领域。
    BACKGROUND: Secondary investigations into digital health records, including electronic patient data from German medical data integration centers (DICs), pave the way for enhanced future patient care. However, only limited information is captured regarding the integrity, traceability, and quality of the (sensitive) data elements. This lack of detail diminishes trust in the validity of the collected data. From a technical standpoint, adhering to the widely accepted FAIR (Findability, Accessibility, Interoperability, and Reusability) principles for data stewardship necessitates enriching data with provenance-related metadata. Provenance offers insights into the readiness for the reuse of a data element and serves as a supplier of data governance.
    OBJECTIVE: The primary goal of this study is to augment the reusability of clinical routine data within a medical DIC for secondary utilization in clinical research. Our aim is to establish provenance traces that underpin the status of data integrity, reliability, and consequently, trust in electronic health records, thereby enhancing the accountability of the medical DIC. We present the implementation of a proof-of-concept provenance library integrating international standards as an initial step.
    METHODS: We adhered to a customized road map for a provenance framework, and examined the data integration steps across the ETL (extract, transform, and load) phases. Following a maturity model, we derived requirements for a provenance library. Using this research approach, we formulated a provenance model with associated metadata and implemented a proof-of-concept provenance class. Furthermore, we seamlessly incorporated the internationally recognized Word Wide Web Consortium (W3C) provenance standard, aligned the resultant provenance records with the interoperable health care standard Fast Healthcare Interoperability Resources, and presented them in various representation formats. Ultimately, we conducted a thorough assessment of provenance trace measurements.
    RESULTS: This study marks the inaugural implementation of integrated provenance traces at the data element level within a German medical DIC. We devised and executed a practical method that synergizes the robustness of quality- and health standard-guided (meta)data management practices. Our measurements indicate commendable pipeline execution times, attaining notable levels of accuracy and reliability in processing clinical routine data, thereby ensuring accountability in the medical DIC. These findings should inspire the development of additional tools aimed at providing evidence-based and reliable electronic health record services for secondary use.
    CONCLUSIONS: The research method outlined for the proof-of-concept provenance class has been crafted to promote effective and reliable core data management practices. It aims to enhance biomedical data by imbuing it with meaningful provenance, thereby bolstering the benefits for both research and society. Additionally, it facilitates the streamlined reuse of biomedical data. As a result, the system mitigates risks, as data analysis without knowledge of the origin and quality of all data elements is rendered futile. While the approach was initially developed for the medical DIC use case, these principles can be universally applied throughout the scientific domain.
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  • 文章类型: Journal Article
    研究牛肉加工过程中产志贺毒素大肠杆菌(STEC)的分布和生物学特性,是制定牛肉种植关键控制点和进行食品安全风险评估的基础。首先研究了从牛肉加工系分离的STEC菌株的stx基因的血清群和亚型。通过将多位点序列分型(MLST)与先前的分布和表征数据相结合,进一步进行了不同采样位点之间交叉污染的鉴定。在中国两个屠宰厂的435个样品中,STEC的PCR阳性率为14.3%,而62个PCR阳性和全部435个样品的分离率分别为26%和3.68%。血清O157:H7(33%)和血清群O121(42%)和O26(21%)的存在以及这些血清群中高致病性基因stx2a(68%)的高检出率表明对牛肉的安全性具有潜在的风险。可追溯性分析表明,皮革在粪便之间的交叉污染中起着至关重要的作用,从分子角度来看,巢穴笔和清洗后的尸体。根据跟踪分析,应将围绕隐藏的干预措施纳入厂内安全控制政策。
    Investigation on the distribution and biological characteristics of Shiga-toxin producing Escherichia coli (STEC) during beef processing is essential for in-plant critical control points and food safety risk assessment. Serogroups and subtypes of stx genes of STEC strains isolated from beef processing lines were first investigated. Identification to cross-contamination among different sampling sites was further conducted by combining multilocus sequence typing (MLST) with the previous distribution and characterization data. The PCR-positive rate for STEC in 435 samples from two slaughter plants in China was 14.3% and the isolation rate for the 62 PCR positive and the entire set of 435 samples were 26% and 3.68% respectively. The existence of serotype O157:H7 (33%) and serogroups O121 (42%) and O26 (21%) as well as the high detection rate of high pathogenic gene stx2a (68%) in these serogroups indicated potential risk to the safety of beef. Traceability analysis showed that hide plays a critical role in cross-contamination between feces, lairage pens and post-washing carcasses from a molecular perspective. Intervening measures revolves around de-hiding should be involved in the in-plant safety control policy according to the tracing analysis.
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  • 文章类型: Journal Article
    背景:在医学信息学倡议的背景下,医疗数据集成中心(DIC)已经实现了复杂的数据流,以将常规医疗保健数据转移到研究数据存储库中以供二次使用。数据管理实践在整个过程中都很重要,应特别注意来源方面。知识不足会导致有效性风险,并降低处理数据的可信度和质量。实施可维护数据管理实践的必要性是无可争议的,但是对身份的了解非常不清楚。
    目的:我们的研究检查了大学医学研究与护理医学信息学(MIRACUM)联盟中整个数据生命周期中当前的数据管理实践。我们为数据管理实践的成熟度状态提供了一个框架,并提出了建议,以实现对常规医疗保健数据的可信传播和重用。
    方法:在这项混合方法研究中,我们在2021年7月至9月期间对10个DIC的利益相关者进行了半结构化访谈。我们使用了我们为MIRACUMDIC量身定制的自行设计的问卷,收集定性和定量数据。我们的研究方法符合混合方法研究(GRAMMS)清单的良好报告。
    结果:我们的研究为MIRACUMDIC的数据管理实践提供了见解。我们确定了几个可追溯性问题,这些问题可以部分解释为在非协调的工作流程步骤中缺乏上下文信息,职责不清,缺少或不完整的数据元素,和关于计算环境信息的不完整信息。根据发现的缺点,我们建议建立一个数据管理成熟度框架,以达到更清晰的目的,并帮助定义增强的数据管理策略。
    结论:数据管理成熟度框架支持生产和传播准确且来源丰富的数据以供二次使用。我们的工作是推导总体数据管理策略的催化剂,遵守数据完整性和来源特征是关键因素。我们设想这项工作将导致产生更公平和保持高质量的健康研究数据。
    In the context of the Medical Informatics Initiative, medical data integration centers (DICs) have implemented complex data flows to transfer routine health care data into research data repositories for secondary use. Data management practices are of importance throughout these processes, and special attention should be given to provenance aspects. Insufficient knowledge can lead to validity risks and reduce the confidence and quality of the processed data. The need to implement maintainable data management practices is undisputed, but there is a great lack of clarity on the status.
    Our study examines the current data management practices throughout the data life cycle within the Medical Informatics in Research and Care in University Medicine (MIRACUM) consortium. We present a framework for the maturity status of data management practices and present recommendations to enable a trustful dissemination and reuse of routine health care data.
    In this mixed methods study, we conducted semistructured interviews with stakeholders from 10 DICs between July and September 2021. We used a self-designed questionnaire that we tailored to the MIRACUM DICs, to collect qualitative and quantitative data. Our study method is compliant with the Good Reporting of a Mixed Methods Study (GRAMMS) checklist.
    Our study provides insights into the data management practices at the MIRACUM DICs. We identify several traceability issues that can be partially explained with a lack of contextual information within nonharmonized workflow steps, unclear responsibilities, missing or incomplete data elements, and incomplete information about the computational environment information. Based on the identified shortcomings, we suggest a data management maturity framework to reach more clarity and to help define enhanced data management strategies.
    The data management maturity framework supports the production and dissemination of accurate and provenance-enriched data for secondary use. Our work serves as a catalyst for the derivation of an overarching data management strategy, abiding data integrity and provenance characteristics as key factors. We envision that this work will lead to the generation of fairer and maintained health research data of high quality.
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  • 文章类型: Journal Article
    海鲜元素分析(SEP)是对海鲜产品中一系列元素的量化,可用于解决海鲜来源和质量问题。用于分析软组织的传统方法对于SEP的工业级使用存在若干限制。便携式手持X射线荧光(pXRF)分析是传统方法的一种有前途的替代方法;然而,其在生物分析中的应用尚未完全确立。按照新颖的软组织协议,使用VantaM系列XRF便携式分析仪分析完整的巨型虎虾(Penaeusmonodon)腹部。探索性统计(主成分分析,非度量多维缩放,和规范判别分析),以及随机森林模型,已经用pXRF配置文件实现了,在分配P.monodon的地理来源时,准确率为81%。这项研究的结果强调,SEP通过pXRF是一个可行的行业层面分析,其应用将取决于改进的仪器校准,以解决受烹饪影响的波动湿度因素,storage,以及其他收获前和收获后的处理。
    Seafood elemental profiling (SEP) is the quantification of a range of elements in seafood products and may serve in addressing questions of seafood provenance and quality. Traditional methods for analyzing soft tissue present several limitations for the industry-level use of SEP. Portable handheld X-ray fluorescence (pXRF) analysis is a promising alternative to conventional methods; however, its application for biological analysis has not been fully established. Intact giant tiger prawn (Penaeus monodon) abdomens were analyzed with a Vanta M series XRF portable analyzer following a novel soft tissue protocol. Exploratory statistics (principal component analysis, nonmetric multidimensional scaling, and canonical discriminant analysis), as well as random forest models, have been implemented with pXRF profiles, yielding 81% accuracy when assigning the geographical origin of P. monodon. The results of this study highlight that SEP via pXRF is a viable industry-level analysis, and its application will depend on improved instrument calibration to account for fluctuating wetness factors that are influenced by cooking, storage, and other pre- and post-harvest treatments.
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  • 文章类型: Journal Article
    发酵食品中存在的微生物群落是多样化和动态的,产生负责发酵过程的各种代谢物,赋予特有的感官品质和促进健康的特性,保持发酵食品的微生物安全。在这种情况下,研究这些微生物群落对表征发酵食品和所涉及的生产过程至关重要。基于高通量测序(HTS)的方法如宏基因组学使得能够通过扩增子和鸟枪测序方法进行微生物群落研究。随着该领域的不断发展,测序技术变得越来越容易获得,负担得起的和准确的进一步转变从短读取到长读取测序被观察到。宏基因组学在发酵食品研究中得到了广泛的应用,近年来还与合成生物学技术一起使用,以帮助解决食品行业产生的大量废物问题。这篇综述介绍了当前的测序技术及其在发酵食品中应用的好处。
    The microbial communities present within fermented foods are diverse and dynamic, producing a variety of metabolites responsible for the fermentation processes, imparting characteristic organoleptic qualities and health-promoting traits, and maintaining microbiological safety of fermented foods. In this context, it is crucial to study these microbial communities to characterise fermented foods and the production processes involved. High Throughput Sequencing (HTS)-based methods such as metagenomics enable microbial community studies through amplicon and shotgun sequencing approaches. As the field constantly develops, sequencing technologies are becoming more accessible, affordable and accurate with a further shift from short read to long read sequencing being observed. Metagenomics is enjoying wide-spread application in fermented food studies and in recent years is also being employed in concert with synthetic biology techniques to help tackle problems with the large amounts of waste generated in the food sector. This review presents an introduction to current sequencing technologies and the benefits of their application in fermented foods.
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  • 文章类型: Journal Article
    基于区块链技术的供应链系统的主要目的是利用技术创新来确保跟踪资产的审计跟踪是不可变的。然而,挑战在于在不同的基于区块链的供应链系统中跟踪资产。本文提出的模型旨在克服已确定的挑战。具体来说,所提出的模型使得:(1)资产在不同的基于区块链的供应链系统之间被跟踪;(2)被跟踪的资产的供应链被加密验证;(3)被跟踪的资产被定义为标准化格式;和(4)被跟踪的资产被描述为几种不同的标准化格式。因此,与文献中的其他模型相比,该模型在不同区块链驱动的供应链之间的互操作性方面提供了很大的优势,这将需要复制他们操作的每个区块链平台中的信息,同时为使用它的平台提供灵活性,并保持这些物流平台的可扩展性。这项工作旨在从操作的角度检查所提出的模型的应用,在制药行业的情况下。
    The main purpose of supply chain systems based on blockchain technology is to take advantage of technology innovations to ensure that a tracked asset\'s audit trail is immutable. However, the challenge lies in tracking the asset among different blockchain-based supply chain systems. The model proposed in this paper has been designed to overcome the identified challenges. Specifically, the proposed model enables: (1) the asset to be tracked among different blockchain-based supply-chain systems; (2) the tracked asset\'s supply chain to be cryptographically verified; (3) a tracked asset to be defined in a standardized format; and (4) a tracked asset to be described with several different standardized formats. Thus, the model provides a great advantage in terms of interoperability between different blockchain-driven supply chains over other models in the literature, which will need to replicate the information in each blockchain platform they operate with, while giving flexibility to the platforms that make use of it and maintain the scalability of those logistic platforms. This work aims to examine the application of the proposed model from an operational point of view, in a scenario within the pharmaceutical sector.
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  • 文章类型: Journal Article
    在意大利,马尼拉蛤给(菲律宾蛤仔,亚当斯和里夫,1850)主要位于波河三角洲的亚得里亚海北部泻湖,贝类养殖提供了重要的社会经济收入。然而,在我们全球化的世界里,海鲜市场受到欺诈活动的威胁,其中出售出处未经认证的农业食品,对消费者健康构成风险。多同位素比率分析通常用于追踪在不同气候和环境条件下不同国家生产的商品的来源。这里,我们调查了这种方法的可靠性,以追踪在三个彼此靠近的亚得里亚海北部泻湖中收获的马尼拉clam的确切来源。我们还核实了在当地超市购买的样品的来源,并附有出处证明。我们进行了碳(C)的元素分析,氮(N),和硫(S)和各自的同位素比(13C/12C;15N/14N;34S/32S)在马尼拉蛤类组织,加上碳同位素分析(13C/12C),氧气(18O/16O),和锶(87Sr/86Sr)在马尼拉蛤壳上。每个同位素参数可用于识别泻湖中发生的水和/或养分供应的海洋和大陆贡献。因此,线性判别分析(LDA)中同位素参数的组合可以鉴定出产生马尼拉clam的泻湖。
    In Italy, the production of manila clams (Ruditapes philippinarum, Adams and Reeve, 1850) is mainly localized in northern Adriatic lagoons in the Po River delta, where shellfish farming provides important socio-economic revenue. However, in our globalized world, the seafood market is threated by fraudulent activities, in which agri-food products whose provenance is not certified are sold, posing a risk to consumer health. Multi-isotope ratio analysis is commonly used to trace the provenance of goods produced in different countries with different climatic and environmental conditions. Here, we investigated the reliability of this approach in terms of tracing the exact provenance of manila clams harvested in three Adriatic northern lagoons that are close to each other. We also verified the origin of samples bought at a local supermarket with a certificate of provenance. We carried out elemental analyses of carbon (C), nitrogen (N), and sulfur (S) and the respective isotopic ratios (13C/12C; 15N/14N; 34S/32S) on manila clam tissues, plus isotopic analyses of carbon (13C/12C), oxygen (18O/16O), and strontium (87Sr/86Sr) on manila clam shells. Each isotopic parameter can be used to identify the marine and continental contributions of water and/or nutrient supplies occurring in the lagoons. Therefore, the combination of isotopic parameters in a linear discriminant analysis (LDA) allowed for the identification of the lagoons in which the manila clams were produced.
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