machine learning model

机器学习模型
  • 文章类型: Journal Article
    含藻水体的化学适度预氧化是一种经济、有前景的控制藻类和外源污染物的策略,然而,它受到缺乏有效的在线评估和快速响应反馈方法的制约。在这里,激发-发射矩阵平行因素分析(EEM-PARAFAC)用于在激发/发射波长为260(360)/450nm的次氯酸钠(NaClO)预氧化后鉴定蓝细菌荧光团,在此基础上定量评估了藻类细胞完整性和细胞内有机物(IOM)释放。建立了荧光光谱数据的机器学习模型,用于使用NaClO预测中度预氧化。适度预氧化的最佳NaClO剂量取决于藻类密度,生长阶段,和水源水基质中的有机物浓度。低剂量的NaClO(<0.5mg/L)导致表面吸附的有机物(S-AOM)的短期解吸,而不会损害藻类细胞的完整性,而高剂量的NaClO(≥0.5mg/L)迅速引起细胞损伤。最佳NaClO用量从0.2-0.3mg/L增加到0.9-1.2mg/L,对应于藻类密度从0.1×10到2.0×10的源水细胞/mL。不同的生长阶段需要不同的NaClO剂量:静止期细胞需要0.3-0.5mg/L,对数期细胞0.6-0.8mg/L,和腐烂的细胞2.0-2.5毫克/升天然有机物和S-AOM的存在随着较高的溶解有机碳(DOC)浓度(1.00mg/LDOC需要0.8-1.0mg/LNaClO,而2.20mg/LDOC需要1.5-2.0mg/L)。与其他预测模型相比,机器学习模型(高斯过程回归-Matern(0.5))表现最好,在训练和测试集中实现1.000和0.976的R2值。最佳预氧化后的混凝有效去除藻类污染物,达到91%,92%,藻类细胞被去除92%,浊度,和叶绿素a,分别,从而证明了适度预氧化的有效性。本研究介绍了一种通过监测水源水质和跟踪预氧化后荧光团动态调整NaClO剂量的新方法,加强适度预氧化技术在含藻水处理中的应用。
    Chemical moderate preoxidation for algae-laden water is an economical and prospective strategy for controlling algae and exogenous pollutants, whereas it is constrained by a lack of effective on-line evaluation and quick-response feedback method. Herein, excitation-emission matrix parallel factor analysis (EEM-PARAFAC) was used to identify cyanobacteria fluorophores after preoxidation of sodium hypochlorite (NaClO) at Excitation/Emission wavelength of 260(360)/450 nm, based on which the algal cell integrity and intracellular organic matter (IOM) release were quantitatively assessed. Machine learning modeling of fluorescence spectral data for prediction of moderate preoxidation using NaClO was established. The optimal NaClO dosage for moderate preoxidation depended on algal density, growth phases, and organic matter concentrations in source water matrices. Low doses of NaClO (<0.5 mg/L) led to short-term desorption of surface-adsorbed organic matter (S-AOM) without compromising algal cell integrity, whereas high doses of NaClO (≥0.5 mg/L) quickly caused cell damage. The optimal NaClO dosage increased from 0.2-0.3 mg/L to 0.9-1.2 mg/L, corresponding to the source water with algal densities from 0.1 × 10⁶ to 2.0 × 10⁶ cells/mL. Different growth stages required varying NaClO doses: stationary phase cells needed 0.3-0.5 mg/L, log phase cells 0.6-0.8 mg/L, and decaying cells 2.0-2.5 mg/L. The presence of natural organic matter and S-AOM increased the NaClO dosage limit with higher dissolved organic carbon (DOC) concentrations (1.00 mg/L DOC required 0.8-1.0 mg/L NaClO, while 2.20 mg/L DOC required 1.5-2.0 mg/L). Compared to other predictive models, the machine learning model (Gaussian process regression-Matern (0.5)) performed best, achieving R2 values of 1.000 and 0.976 in training and testing sets. Optimal preoxidation followed by coagulation effectively removed algal contaminants, achieving 91%, 92%, and 92% removal for algal cells, turbidity, and chlorophyll-a, respectively, thereby demonstrating the effectiveness of moderate preoxidation. This study introduces a novel approach to dynamically adjust NaClO dosage by monitoring source water qualities and tracking post-preoxidation fluorophores, enhancing moderate preoxidation technology application in algae-laden water treatment.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    本研究旨在从生物信息学和实验角度验证核心角化基因(CRGs)与阿尔茨海默病(AD)之间的关联,并建立风险预测模型。为此,从GSE109887分析了78个人类来源的颞叶样本,并通过聚类分析探索了所得CRGs的生物学功能,加权基因共表达网络分析和类似方法,以确定最佳机器模型。此外,使用外部数据集GSE33000和列线图来验证模型.使用SH-SY5Y细胞模型和Sprague-Dawley大鼠动物模型验证CRGs的mRNA和蛋白表达。RT‑qPCR和Westernblotting结果显示,二氢硫磺酰胺脱氢酶的mRNA和蛋白表达量,铁氧还蛋白1、谷氨酰胺酶和丙酮酸脱氢酶E1亚基β降低,二氢硫酰胺支链转酰酶E2在AD中的表达增加,这支持了生物信息学分析结果。CRG表达改变影响某些免疫细胞的聚集和浸润。本研究还证实了AD诊断模型和列线图的准确性和有效性。并验证了五个CRG与AD之间的关联,表明AD患者与健康个体之间存在显着差异。因此,CRGs有望作为AD诊断和预后监测的相关生物标志物。
    The present study aimed to validate the association between core cuproptosis genes (CRGs) and Alzheimer\'s disease (AD) from both bioinformatics and experimental perspectives and also to develop a risk prediction model. To this end, 78 human‑derived temporal back samples were analyzed from GSE109887, and the biological functions of the resulting CRGs were explored by cluster analysis, weighted gene co‑expression network analysis and similar methods to identify the best machine model. Moreover, an external dataset GSE33000 and a nomogram were used to validate the model. The mRNA and protein expression of CRGs were validated using the SH‑SY5Y cell model and the Sprague‑Dawley rat animal model. The RT‑qPCR and western blotting results showed that the mRNA and protein expression content of dihydrolipoamide dehydrogenase, ferredoxin 1, glutaminase and pyruvate dehydrogenase E1 subunit β decreased, and the expression of dihydrolipoamide branched chain transacylase E2 increased in AD, which supported the bioinformatic analysis results. The CRG expression alterations affected the aggregation and infiltration of certain immune cells. The present study also confirmed the accuracy and validity of AD diagnostic models and nomograms, and validated the association between five CRGs and AD, indicating a significant difference between patients with AD and healthy individuals. Therefore, CRGs are expected to serve as relevant biomarkers for the diagnosis and prognostic monitoring of AD.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    阿尔茨海默病是一种神经退行性疾病,其特征是脑细胞进行性变性,导致认知能力下降和记忆丧失。它是痴呆症的最常见原因,影响全球数百万人。虽然目前没有治愈阿尔茨海默病的方法,早期发现和治疗有助于减缓症状进展,提高生活质量。这项研究提出了一种诊断工具,用于使用基于特征的机器学习对轻度认知障碍和阿尔茨海默病进行分类,该机器学习应用于光学相干断层血管造影图像(OCT-A)。从OCT-A图像中提取几个特征,包括五个部门的容器密度,中央凹无血管区的区域,视网膜厚度,和基于范围过滤的OCT-A图像的直方图的新颖特征。为了确保多样化人口的有效性,收集了我们研究的大型本地数据库。我们研究的有希望的结果,92.17,%的最佳准确度将为早期发现阿尔茨海默病提供有效的诊断工具。
    Alzheimer\'s disease is a type of neurodegenerative disorder that is characterized by the progressive degeneration of brain cells, leading to cognitive decline and memory loss. It is the most common cause of dementia and affects millions of people worldwide. While there is currently no cure for Alzheimer\'s disease, early detection and treatment can help to slow the progression of symptoms and improve quality of life. This research presents a diagnostic tool for classifying mild cognitive impairment and Alzheimer\'s diseases using feature-based machine learning applied to optical coherence tomographic angiography images (OCT-A). Several features are extracted from the OCT-A image, including vessel density in five sectors, the area of the foveal avascular zone, retinal thickness, and novel features based on the histogram of the range-filtered OCT-A image. To ensure effectiveness for a diverse population, a large local database for our study was collected. The promising results of our study, with the best accuracy of 92.17,% will provide an efficient diagnostic tool for early detection of Alzheimer\'s disease.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    化学预处理是提高木质纤维素废物(LW)累积甲烷产率(CMY)的常用方法,但其效果受多种因素影响。准确估计预处理LW的甲烷产量仍然是一个挑战。这里,基于254个LW样本,使用两个自动ML平台(基于树的管道优化工具和神经网络智能)构建了机器学习(ML)模型来预测预处理原料的甲烷生产性能。此外,预处理条件的相互作用效应,原料性质,通过模型可解释性分析,研究了消化条件对预处理LW产甲烷的影响。最优ML模型在验证集上表现良好,和消化时间,预处理剂,发现木质素含量(LC)是影响预处理LW甲烷产量的关键因素。如果原始LW中的LC低于15%,使用NaOH可以达到最大CMY,KOH,KOH和碱性过氧化氢(AHP),浓度为3.8%,4.4%,和4.5%,分别。另一方面,如果LC高于15%,只有超过4%的高浓度层次分析法才能显著提高甲烷产量。本研究为优化预处理工艺提供了有价值的指导,比较不同的化学预处理方法,并规范大型沼气厂的运行。
    Chemical pretreatment is a common method to enhance the cumulative methane yield (CMY) of lignocellulosic waste (LW) but its effectiveness is subject to various factors, and accurate estimation of methane production of pretreated LW remains a challenge. Here, based on 254 LW samples, a machine learning (ML) model to predict the methane production performance of pretreated feedstock was constructed using two automated ML platforms (tree-based pipeline optimization tool and neural network intelligence). Furthermore, the interactive effects of pretreatment conditions, feedstock properties, and digestion conditions on methane production of pretreated LW were studied through model interpretability analysis. The optimal ML model performed well on the validation set, and the digestion time, pretreatment agent, and lignin content (LC) were found to be key factors affecting the methane production of pretreated LW. If the LC in the raw LW was lower than 15%, the maximum CMY might be achieved using the NaOH, KOH, and alkaline hydrogen peroxide (AHP) with concentrations of 3.8%, 4.4%, and 4.5%, respectively. On the other hand, if LC was higher than 15%, only high concentrations of AHP exceeding 4% could significantly increase methane production. This study provides valuable guidance for optimizing pretreatment process, comparing different chemical pretreatment approaches, and regulating the operation of large-scale biogas plants.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    口腔鳞状细胞癌的组织学分级影响预后。在本研究中,我们进行了影像组学分析,从18F-FDGPET图像数据中提取特征,从功能创建机器学习模型,并验证了口腔鳞状细胞癌组织学分级预测的准确性。研究对象为191例患者,术前进行18F-FDG-PET检查,术后确认组织病理学分级,它们的肿瘤大小足以进行影像组学分析。这些患者被分成70%/30%的比例,用作训练数据和测试数据,分别。我们从每位患者的PET图像中提取了2993个影像组学特征。逻辑回归(LR),支持向量机(SVM)随机森林(RF),朴素贝叶斯(NB),并创建了K最近邻(KNN)机器学习模型。从受试者工作特征曲线获得的预测口腔鳞状细胞癌组织学分级的曲线下面积分别为LR的0.72、0.71、0.84、0.74和0.73,SVM,射频,NB,和KNN,分别。我们证实,PET影像组学分析可用于术前预测口腔鳞状细胞癌的组织学分级。
    The histological grade of oral squamous cell carcinoma affects the prognosis. In the present study, we performed a radiomics analysis to extract features from 18F-FDG PET image data, created machine learning models from the features, and verified the accuracy of the prediction of the histological grade of oral squamous cell carcinoma. The subjects were 191 patients in whom an 18F-FDG-PET examination was performed preoperatively and a histopathological grade was confirmed after surgery, and their tumor sizes were sufficient for a radiomics analysis. These patients were split in a 70%/30% ratio for use as training data and testing data, respectively. We extracted 2993 radiomics features from the PET images of each patient. Logistic Regression (LR), Support Vector Machine (SVM), Random Forest (RF), Naïve Bayes (NB), and K-Nearest Neighbor (KNN) machine learning models were created. The areas under the curve obtained from receiver operating characteristic curves for the prediction of the histological grade of oral squamous cell carcinoma were 0.72, 0.71, 0.84, 0.74, and 0.73 for LR, SVM, RF, NB, and KNN, respectively. We confirmed that a PET radiomics analysis is useful for the preoperative prediction of the histological grade of oral squamous cell carcinoma.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    高性能混凝土(HPC)抗压强度与其组分之间存在复杂的高维非线性映射关系,对抗压强度的准确预测有很大影响。在本文中,结合BP神经网络(BPNN)的高效稳健软件计算策略,提出了支持向量机(SVM)和遗传算法(GA)用于HPC的抗压强度预测。从以前的文献中提取了8个特征,构建了包含454组数据的抗压强度数据库。对模型进行了训练和测试,以及4个机器学习(ML)模型的性能,即BPNN,SVM,GA-BPNN和GA-SVM,比较。结果表明,耦合模型优于单一模型。此外,由于GA-SVM具有较好的泛化能力和理论基础,其收敛速度和预测精度均优于GA-BPNN。然后利用灰色关联分析(GRA)和Shapley分析验证了GA-SVM模型的可解释性,结果表明,水胶比对抗压强度的影响最大。最后,多输入变量的组合来评估抗压强度,补充了本研究,并再次验证了水胶比的显著影响,为后续研究提供参考价值。
    There is a complex high-dimensional nonlinear mapping relationship between the compressive strength of High-Performance Concrete (HPC) and its components, which has great influence on the accurate prediction of compressive strength. In this paper, an efficient robust software calculation strategy combining BP Neural Network (BPNN), Support Vector Machine (SVM) and Genetic Algorithm (GA) is proposed for the prediction of compressive strength of HPC. 8 features were extracted from the previous literature, and a compressive strength database containing 454 sets of data was constructed. The model was trained and tested, and the performance of 4 Machine Learning (ML) models, namely BPNN, SVM, GA-BPNN and GA-SVM, was compared. The results show that the coupled model is superior to the single model. Moreover, because GA-SVM has better generalization ability and theoretical basis, its convergence speed and prediction accuracy are better than GA-BPNN. Then Grey Relational Analysis (GRA) and Shapley analysis were used to verify the interpretability of the GA-SVM model, which showed that the water-binder ratio had the most significant influence on the compressive strength. Finally, the combination of multiple input variables to evaluate the compressive strength supplemented this research, and again verified the significant influence of water-binder ratio, providing reference value for subsequent research.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    背景:术前评估很重要,我们的研究探索了机器学习方法在麻醉风险分类和评估各种因素贡献中的应用。为了在模型训练期间最小化混杂变量的影响,我们使用了生理状态和年龄相似的同质组,他们接受了类似的盆腔器官相关手术,但不涉及恶性肿瘤.
    目的:2017年1月1日至2021年12月31日期间进行妊娠或妇科手术的育龄妇女(年龄=20-50岁)的数据来自国立台湾大学医院综合医学数据库。
    方法:我们首先进行了探索性分析并选择了关键特征。然后,我们进行了数据预处理,以获取与术前检查相关的特征。为了进一步提高预测性能,我们采用对数似然比算法生成合并症模式。最后,我们将处理后的特征输入到光梯度增强机(LightGBM)模型中进行训练和后续预测。
    结果:共纳入10,892例患者。在这个数据集中,9893名患者被归类为低麻醉风险(美国麻醉医师协会身体状况评分1-2),999例患者被归类为麻醉风险高(美国麻醉医师协会身体状况评分>2)。LightGBM模型的接收器工作特性曲线下的面积为90.25。
    结论:通过结合合并症信息和临床实验室数据,我们基于LightGBM模型的方法为麻醉风险分类提供了更准确的预测.
    背景:本研究已在国立台湾大学医院研究伦理委员会注册,试验编号为202204010RINB。
    BACKGROUND: Preoperative evaluation is important, and this study explored the application of machine learning methods for anesthetic risk classification and the evaluation of the contributions of various factors. To minimize the effects of confounding variables during model training, we used a homogenous group with similar physiological states and ages undergoing similar pelvic organ-related procedures not involving malignancies.
    OBJECTIVE: Data on women of reproductive age (age 20-50 years) who underwent gestational or gynecological surgery between January 1, 2017, and December 31, 2021, were obtained from the National Taiwan University Hospital Integrated Medical Database.
    METHODS: We first performed an exploratory analysis and selected key features. We then performed data preprocessing to acquire relevant features related to preoperative examination. To further enhance predictive performance, we used the log-likelihood ratio algorithm to generate comorbidity patterns. Finally, we input the processed features into the light gradient boosting machine (LightGBM) model for training and subsequent prediction.
    RESULTS: A total of 10,892 patients were included. Within this data set, 9893 patients were classified as having low anesthetic risk (American Society of Anesthesiologists physical status score of 1-2), and 999 patients were classified as having high anesthetic risk (American Society of Anesthesiologists physical status score of >2). The area under the receiver operating characteristic curve of the proposed model was 0.6831.
    CONCLUSIONS: By combining comorbidity information and clinical laboratory data, our methodology based on the LightGBM model provides more accurate predictions for anesthetic risk classification.
    BACKGROUND: Research Ethics Committee of the National Taiwan University Hospital 202204010RINB; https://www.ntuh.gov.tw/RECO/Index.action.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    背景:及时有效地识别患有抑郁症(DS)的个体对于提供及时治疗至关重要。机器学习模型在这一领域表现出了希望;然而,研究往往不足以证明使用这些模型的实际好处,并且无法提供切实的实际应用。
    目的:本研究旨在建立一种新的方法来识别可能表现出DS的个体,通过概率测度以更可解释的方式识别最有影响力的特征,并提出可用于实际应用的工具。
    方法:该研究使用了3个数据集:PROACTIVE,2013年巴西国家健康调查(PesquisaNacionaldeSaúde[PNS])和PNS2019,包括社会人口统计学和健康相关特征。使用贝叶斯网络进行特征选择。然后使用选定的特征来训练机器学习模型以预测DS,在9项患者健康问卷中,评分≥10。与随机方法相比,该研究还分析了不同敏感性率对减少筛选访谈的影响。
    结果:该方法允许用户在灵敏度之间进行明智的权衡,特异性,减少面试次数。在通过最大化Youden指数确定的阈值0.444、0.412和0.472下,模型的灵敏度为0.717、0.741和0.718,特异性为0.644、0.737和0.766,分别为PNS2013和PNS2019。这3个数据集的接收器工作特性曲线下面积分别为0.736、0.801和0.809,分别。对于PROACTIVE数据集,最具影响力的特征是姿势平衡,呼吸急促,以及老年人的感觉。在PNS2013数据集中,特点是能够进行日常活动,胸痛,睡眠问题,和慢性背部问题。PNS2019数据集与PNS2013数据集共享3个最具影响力的特征。然而,不同的是用言语虐待代替了慢性背部问题。重要的是要注意,PNS数据集中包含的特征与PROACTIVE数据集中的特征不同。实证分析表明,使用所提出的模型可导致筛选访谈减少52%,同时保持0.80的敏感性。
    结论:这项研究开发了一种新的方法来识别患有DS的个体,展示了使用贝叶斯网络识别最重要特征的实用性。此外,这种方法有可能大大减少筛选访谈的数量,同时保持高度的敏感性,从而促进改善DS患者的早期识别和干预策略。
    BACKGROUND: Identifying individuals with depressive symptomatology (DS) promptly and effectively is of paramount importance for providing timely treatment. Machine learning models have shown promise in this area; however, studies often fall short in demonstrating the practical benefits of using these models and fail to provide tangible real-world applications.
    OBJECTIVE: This study aims to establish a novel methodology for identifying individuals likely to exhibit DS, identify the most influential features in a more explainable way via probabilistic measures, and propose tools that can be used in real-world applications.
    METHODS: The study used 3 data sets: PROACTIVE, the Brazilian National Health Survey (Pesquisa Nacional de Saúde [PNS]) 2013, and PNS 2019, comprising sociodemographic and health-related features. A Bayesian network was used for feature selection. Selected features were then used to train machine learning models to predict DS, operationalized as a score of ≥10 on the 9-item Patient Health Questionnaire. The study also analyzed the impact of varying sensitivity rates on the reduction of screening interviews compared to a random approach.
    RESULTS: The methodology allows the users to make an informed trade-off among sensitivity, specificity, and a reduction in the number of interviews. At the thresholds of 0.444, 0.412, and 0.472, determined by maximizing the Youden index, the models achieved sensitivities of 0.717, 0.741, and 0.718, and specificities of 0.644, 0.737, and 0.766 for PROACTIVE, PNS 2013, and PNS 2019, respectively. The area under the receiver operating characteristic curve was 0.736, 0.801, and 0.809 for these 3 data sets, respectively. For the PROACTIVE data set, the most influential features identified were postural balance, shortness of breath, and how old people feel they are. In the PNS 2013 data set, the features were the ability to do usual activities, chest pain, sleep problems, and chronic back problems. The PNS 2019 data set shared 3 of the most influential features with the PNS 2013 data set. However, the difference was the replacement of chronic back problems with verbal abuse. It is important to note that the features contained in the PNS data sets differ from those found in the PROACTIVE data set. An empirical analysis demonstrated that using the proposed model led to a potential reduction in screening interviews of up to 52% while maintaining a sensitivity of 0.80.
    CONCLUSIONS: This study developed a novel methodology for identifying individuals with DS, demonstrating the utility of using Bayesian networks to identify the most significant features. Moreover, this approach has the potential to substantially reduce the number of screening interviews while maintaining high sensitivity, thereby facilitating improved early identification and intervention strategies for individuals experiencing DS.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    阿尔茨海默病(AD)的发病率在全球范围内呈上升趋势,然而,由于与之相关的复杂病理生理机制,其治疗和预测仍具有挑战性。因此,本研究的目的是分析和表征铁凋亡相关基因(FEGs)在AD发病机理中的分子机制,以及构建预后模型。这些发现将为未来AD的诊断和治疗提供新的见解。首先,获得了来自基因表达综合数据库的AD数据集GSE33000和来自FerrDB的FEGs。接下来,无监督聚类分析用于获得与AD最相关的FEGs。随后,对FEGs进行富集分析以探索生物学功能。随后,通过CIBERSORT阐明了这些基因在免疫微环境中的作用。然后,通过比较不同机器学习模型的性能选择最优机器学习。为了验证预测效率,使用列线图对模型进行了验证,校正曲线,决策曲线分析和外部数据集。此外,使用逆转录定量PCR和Westernblot分析验证不同组间FEGs的表达.在AD中,FEGs表达的改变影响某些免疫细胞的聚集和浸润。这表明AD的发生与免疫浸润密切相关。最后,选择了最合适的机器学习模型,建立AD诊断模型和列线图。本研究提供了新的见解,可以增强对FEGs在AD中作用的分子机制的理解。此外,本研究提供了可能有助于AD诊断的生物标志物.
    The incidence of Alzheimer\'s disease (AD) is rising globally, yet its treatment and prediction of this condition remain challenging due to the complex pathophysiological mechanisms associated with it. Consequently, the objective of the present study was to analyze and characterize the molecular mechanisms underlying ferroptosis‑related genes (FEGs) in the pathogenesis of AD, as well as to construct a prognostic model. The findings will provide new insights for the future diagnosis and treatment of AD. First, the AD dataset GSE33000 from the Gene Expression Omnibus database and the FEGs from FerrDB were obtained. Next, unsupervised cluster analysis was used to obtain the FEGs that were most relevant to AD. Subsequently, enrichment analyses were performed on the FEGs to explore biological functions. Subsequently, the role of these genes in the immune microenvironment was elucidated through CIBERSORT. Then, the optimal machine learning was selected by comparing the performance of different machine learning models. To validate the prediction efficiency, the models were validated using nomograms, calibration curves, decision curve analysis and external datasets. Furthermore, the expression of FEGs between different groups was verified using reverse transcription quantitative PCR and western blot analysis. In AD, alterations in the expression of FEGs affect the aggregation and infiltration of certain immune cells. This indicated that the occurrence of AD is strongly associated with immune infiltration. Finally, the most appropriate machine learning models were selected, and AD diagnostic models and nomograms were built. The present study provided novel insights that enhance understanding with regard to the molecular mechanism of action of FEGs in AD. Moreover, the present study provided biomarkers that may facilitate the diagnosis of AD.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    双酚A二缩水甘油醚(BADGE),众所周知的内分泌干扰物双酚A(BPA)的衍生物,由于其作为微污染物的普遍存在,因此对长期环境健康构成潜在威胁。这项研究解决了以前未开发的BADGE毒性和去除领域。我们调查了,第一次,从嗜热地芽孢杆菌中分离的漆酶对BADGE的生物降解潜力。使用响应面方法(RSM)和机器学习模型的组合来优化漆酶介导的降解过程。通过各种技术分析了BADGE的降解,包括紫外-可见分光光度法,高效液相色谱(HPLC),傅里叶变换红外(FTIR)光谱,和气相色谱-质谱(GC-MS)。嗜热脂肪土芽孢杆菌MB600的漆酶在30min内降解率为93.28%,而来自热parafinivorans地芽孢杆菌菌株MB606的漆酶在90分钟内降解达到94%。RSM分析预测最佳降解条件为60min反应时间,温度80°C,和pH4.5。此外,CB-Dock模拟揭示了漆酶和BADGE之间良好的结合相互作用,对于263的腔大小和-5.5的Vina评分选择初始结合模式,这证实了所观察到的漆酶的生物降解潜力。这些发现突出了来自嗜热地芽孢杆菌菌株的漆酶的生物催化潜力,特别是MB600,用于对BADGE污染的环境进行酶净化。
    Bisphenol A diglycidyl ether (BADGE), a derivative of the well-known endocrine disruptor Bisphenol A (BPA), is a potential threat to long-term environmental health due to its prevalence as a micropollutant. This study addresses the previously unexplored area of BADGE toxicity and removal. We investigated, for the first time, the biodegradation potential of laccase isolated from Geobacillus thermophilic bacteria against BADGE. The laccase-mediated degradation process was optimized using a combination of response surface methodology (RSM) and machine learning models. Degradation of BADGE was analyzed by various techniques, including UV-Vis spectrophotometry, high-performance liquid chromatography (HPLC), Fourier transform infrared (FTIR) spectroscopy, and gas chromatography-mass spectrometry (GC-MS). Laccase from Geobacillus stearothermophilus strain MB600 achieved a degradation rate of 93.28% within 30 min, while laccase from Geobacillus thermoparafinivorans strain MB606 reached 94% degradation within 90 min. RSM analysis predicted the optimal degradation conditions to be 60 min reaction time, 80°C temperature, and pH 4.5. Furthermore, CB-Dock simulations revealed good binding interactions between laccase enzymes and BADGE, with an initial binding mode selected for a cavity size of 263 and a Vina score of -5.5, which confirmed the observed biodegradation potential of laccase. These findings highlight the biocatalytic potential of laccases derived from thermophilic Geobacillus strains, notably MB600, for enzymatic decontamination of BADGE-contaminated environments.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

公众号