induced pluripotent stem cells

诱导多能干细胞
  • 文章类型: Journal Article
    大脑的三维培养模型能够在复杂的互连细胞基质的背景下研究神经感染。根据神经细胞的分化状态,存在两种模型:3D球体,也称为神经球和大脑器官。这里,我们描述了3D球体和脑类器官的制备,并对它们在研究裂谷热病毒和其他嗜神经病毒中的应用进行了展望。
    Three-dimensional culture models of the brain enable the study of neuroinfection in the context of a complex interconnected cell matrix. Depending on the differentiation status of the neural cells, two models exist: 3D spheroids also called neurospheres and cerebral organoids. Here, we describe the preparation of 3D spheroids and cerebral organoids and give an outlook on their usage to study Rift Valley fever virus and other neurotropic viruses.
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  • 文章类型: Journal Article
    神经肌肉疾病是一组异质性疾病,范围从轻度到破坏性表型,取决于疾病的起源。许多这些疾病的病理生理学尚未完全了解,因此迫切需要有效的治疗方法。诱导多能干细胞和器官芯片技术领域的最新进展带来了神经肌肉疾病建模的巨大改进。即使是复杂的单位,比如神经肌肉接头,现在可以建造,使研究人员能够研究电机单元的每个部件本身或与他人互动,允许识别疾病机制。本文旨在介绍这些新的建模系统,以研究神经肌肉疾病以及芯片上器官平台的可能性,以阐明疾病病理及其在治疗开发中的用途。
    Neuromuscular disorders are a heterogeneous group of diseases ranging from mild to devastating phenotypes depending on the disorder\'s origin. Pathophysiologies for many of these disorders are not fully understood and efficient therapies are urgently needed. Recent advances in the field of induced pluripotent stem cells and organ-on-a-chip technologies have brought enormous improvement in modeling neuromuscular diseases. Even complex units, like the neuromuscular junction, can now be built, enabling researchers to study each component of the motor unit by itself or interacting with others, allowing the identification of disease mechanisms. This article aims to introduce these new modeling systems to study neuromuscular disorders and the possibilities of organ-on-a-chip platforms to shed light on disease pathologies and their use for therapy development.
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  • 文章类型: Journal Article
    尽管对银纳米粒子(AgNP)毒性进行了二十年的研究,尚未建立暴露的安全阈值,尽管对于风险评估和监管决策至关重要。传统上,使用未观察到的不良反应水平(NOAEL)方法,从动物研究中顶端终点的剂量反应得出起点(PoD)值,或基准剂量(BMD)建模。为了开发新的方法方法(NAM),为AgNPs的人类风险评估提供信息,我们在暴露于广泛浓度(0.01-25μg/ml)的AgNPs24小时后,对来自人诱导多能干细胞(iPSCs)的肝细胞的转录组变化进行了浓度响应建模。对于与AgNPs的作用模式(MOA)相关的途径,得出了0.21μg/ml的合理转录组PoD,对于与AgNPs的MOA没有明显关联的基因本体论(GO)术语,更保守的PoD为0.10μg/ml。参考剂量(RfD)可以从PoD中的任一个计算,作为AgNP暴露的安全阈值。当前的研究说明了使用人类细胞作为NAM的体外转录组浓度响应研究对于缺乏足够的毒性数据来告知人类风险评估的化学物质的毒性研究的有用性。
    Despite two decades of research on silver nanoparticle (AgNP) toxicity, a safe threshold for exposure has not yet been established, albeit being critically needed for risk assessment and regulatory decision-making. Traditionally, a point-of-departure (PoD) value is derived from dose response of apical endpoints in animal studies using either the no-observed-adverse-effect level (NOAEL) approach, or benchmark dose (BMD) modeling. To develop new approach methodologies (NAMs) to inform human risk assessment of AgNPs, we conducted a concentration response modeling of the transcriptomic changes in hepatocytes derived from human induced pluripotent stem cells (iPSCs) after being exposed to a wide range concentration (0.01-25 μg/ml) of AgNPs for 24 h. A plausible transcriptomic PoD of 0.21 μg/ml was derived for a pathway related to the mode-of-action (MOA) of AgNPs, and a more conservative PoD of 0.10 μg/ml for a gene ontology (GO) term not apparently associated with the MOA of AgNPs. A reference dose (RfD) could be calculated from either of the PoDs as a safe threshold for AgNP exposure. The current study illustrates the usefulness of in vitro transcriptomic concentration response study using human cells as a NAM for toxicity study of chemicals that lack adequate toxicity data to inform human risk assessment.
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  • 文章类型: Journal Article
    人类诱导的多能干细胞衍生的心肌细胞(hiPSC-CM)经常用于临床前心脏毒性测试,并且仍然是根据综合体外致心律失常试验(CiPA)确认基于模型的药物作用预测的重要工具。尽管hiPSC-CM提供了相当大的好处,围绕实验可重复性的担忧已经出现。我们研究了时间变化和实验参数对hiPSC-CM电生理的影响。培养iCell心肌细胞2,并使用微电极阵列(MEA)系统获得生物信号(1-14天)。连续记录显示,在20分钟的平衡期间,跳动率增加了22.6%,场电位持续时间(FPD)减少了7.7%。还观察到整个多孔板的位置特定差异,外排的iCell心肌细胞2比内排的每分钟(BPM)快8.8次。心脏终点也受细胞培养时间的影响;从2-14天开始,搏动率降低(-12.7BPM),FPD加长(+257ms),和尖峰幅度增加(+3.3mV)。细胞培养时间(4-10天)也影响心肌细胞药物反应性(E-4031,硝苯地平,异丙肾上腺素)。qRT-PCR结果表明,心脏指标的每日变化可能与培养物中hiPSC-CM的持续成熟(2-30天)有关。还使用第二细胞系(Cor.4U)重复每日实验。总的来说,我们的研究强调了在进行hiPSC-CMMEA研究时需要考虑和解决的多种变异性来源.为了提高可重复性和数据解释,基于MEA的研究应建立标准化的方案并报告关键的实验条件(例如,细胞系,文化时间,平衡时间,电刺激设置,原始数据值)。
    Human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) are frequently used for preclinical cardiotoxicity testing and remain an important tool for confirming model-based predictions of drug effects in accordance with the comprehensive in vitro proarrhythmia assay (CiPA). Despite the considerable benefits hiPSC-CMs provide, concerns surrounding experimental reproducibility have emerged. We investigated the effects of temporal changes and experimental parameters on hiPSC-CM electrophysiology. iCell cardiomyocytes2 were cultured and biosignals were acquired using a microelectrode array (MEA) system (2-14 days). Continuous recordings revealed a 22.6% increase in the beating rate and 7.7% decrease in the field potential duration (FPD) during a 20-min equilibration period. Location-specific differences across a multiwell plate were also observed, with iCell cardiomyocytes2 in the outer rows beating 8.8 beats/min faster than the inner rows. Cardiac endpoints were also impacted by cell culture duration; from 2 to 14 days, the beating rate decreased (-12.7 beats/min), FPD lengthened (+257 ms), and spike amplitude increased (+3.3 mV). Cell culture duration (4-10 days) also impacted cardiomyocyte drug responsiveness (E-4031, nifedipine, isoproterenol). qRT-PCR results suggest that daily variations in cardiac metrics may be linked to the continued maturation of hiPSC-CMs in culture (2-30 days). Daily experiments were also repeated using a second cell line (Cor.4U). Collectively, our study highlights multiple sources of variability to consider and address when performing hiPSC-CM MEA studies. To improve reproducibility and data interpretation, MEA-based studies should establish a standardized protocol and report key experimental conditions (e.g., cell line, culture time, equilibration time, electrical stimulation settings, and raw data values).NEW & NOTEWORTHY We demonstrate that iCell cardiomyocytes2 electrophysiology measurements are impacted by deviations in experimental techniques including electrical stimulation protocols, equilibration time, well-to-well variability, and length of hiPSC-CM culture. Furthermore, our results indicate that hiPSC-CM drug responsiveness changes within the first 2 wk following defrost.
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  • 文章类型: Journal Article
    背景:在波士顿儿童医院智力和发育障碍研究中心(IDDRC)的转化研究中,琥珀酸半醛脱氢酶缺乏症(SSADHD)代表了一种模型神经代谢疾病,包括NIH赞助的临床自然史研究,神经生理学,神经影像学,和分子标记,患者来源的诱导多能干细胞(iPSC)表征,和一个严格调控的鼠模型的发展,细胞特异性基因治疗。
    方法:SSADHD受试者接受临床评估,神经心理学评估,γ-氨基丁酸(GABA)和相关代谢物的生化定量,脑电图(标准和高密度),脑磁图,经颅磁刺激,磁共振成像和光谱学,和基因测试。这与SSADHD受试者的诱导人多能干细胞(hiPSC)衍生的体外GABA能神经元的实验室分子研究以及在通用鼠模型上进行的生化分析平行,该模型使用可诱导和可逆的挽救策略,允许按需和细胞特异性基因治疗。
    结果:62名SSADHD受试者[53%为女性,纳入研究的中位年龄(IQR)为9.6(5.4-14.5)岁]在~6个月时报告出现症状,且诊断的中位年龄为4岁.语言发育迟缓比运动更突出。自闭症,癫痫,运动障碍,睡眠障碍,各种精神行为构成了该疾病临床表型的核心。较低的临床严重程度评分,表示严重程度最差,与年龄相同(R=-0.302,p=0.03),以及年龄调整后的血浆γ-氨基丁酸酯(GABA)(R=0.337,p=0.02)和γ-羟基丁酸酯(GHB)(R=0.360,p=0.05)的较低值。虽然癫痫和精神行为的严重程度随着年龄的增长而增加,沟通能力和运动功能趋于改善。iPSC,分化为GABA能神经元,代表SSADHD的第一个体外神经元模型,并表达神经元标记微管相关蛋白2(MAP2),以及GABA。使用CRISPR校正致病变体或mRNA转染可以逆转诱导的GABA能神经元中的GABA代谢,并且SSADHDiPSCs与过量的谷氨酸能活性和相关的突触兴奋有关。
    结论:来自SSADHD自然历史研究的结果与iPSC和动物模型研究集中在我们IDDRC中的常见疾病上,加深我们对复杂神经发育障碍的病理生理学和纵向临床过程的了解。这进一步使得能够在整个开发过程中识别生物标志物和变化,这对于即将进行的酶替代和基因治疗的靶向试验至关重要。
    BACKGROUND: Succinic semialdehyde dehydrogenase deficiency (SSADHD) represents a model neurometabolic disease at the fulcrum of translational research within the Boston Children\'s Hospital Intellectual and Developmental Disabilities Research Centers (IDDRC), including the NIH-sponsored natural history study of clinical, neurophysiological, neuroimaging, and molecular markers, patient-derived induced pluripotent stem cells (iPSC) characterization, and development of a murine model for tightly regulated, cell-specific gene therapy.
    METHODS: SSADHD subjects underwent clinical evaluations, neuropsychological assessments, biochemical quantification of γ-aminobutyrate (GABA) and related metabolites, electroencephalography (standard and high density), magnetoencephalography, transcranial magnetic stimulation, magnetic resonance imaging and spectroscopy, and genetic tests. This was parallel to laboratory molecular investigations of in vitro GABAergic neurons derived from induced human pluripotent stem cells (hiPSCs) of SSADHD subjects and biochemical analyses performed on a versatile murine model that uses an inducible and reversible rescue strategy allowing on-demand and cell-specific gene therapy.
    RESULTS: The 62 SSADHD subjects [53% females, median (IQR) age of 9.6 (5.4-14.5) years] included in the study had a reported symptom onset at ∼ 6 months and were diagnosed at a median age of 4 years. Language developmental delays were more prominent than motor. Autism, epilepsy, movement disorders, sleep disturbances, and various psychiatric behaviors constituted the core of the disorder\'s clinical phenotype. Lower clinical severity scores, indicating worst severity, coincided with older age (R= -0.302, p = 0.03), as well as age-adjusted lower values of plasma γ-aminobutyrate (GABA) (R = 0.337, p = 0.02) and γ-hydroxybutyrate (GHB) (R = 0.360, p = 0.05). While epilepsy and psychiatric behaviors increase in severity with age, communication abilities and motor function tend to improve. iPSCs, which were differentiated into GABAergic neurons, represent the first in vitro neuronal model of SSADHD and express the neuronal marker microtubule-associated protein 2 (MAP2), as well as GABA. GABA-metabolism in induced GABAergic neurons could be reversed using CRISPR correction of the pathogenic variants or mRNA transfection and SSADHD iPSCs were associated with excessive glutamatergic activity and related synaptic excitation.
    CONCLUSIONS: Findings from the SSADHD Natural History Study converge with iPSC and animal model work focused on a common disorder within our IDDRC, deepening our knowledge of the pathophysiology and longitudinal clinical course of a complex neurodevelopmental disorder. This further enables the identification of biomarkers and changes throughout development that will be essential for upcoming targeted trials of enzyme replacement and gene therapy.
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  • 文章类型: Journal Article
    细胞外基质(ECM)在细胞行为和发育中起着至关重要的作用。由人诱导多能干细胞(hiPSC)产生的类器官是许多研究领域的焦点。然而,在经典细胞培养材料中缺乏生理线索阻碍了有效的iPSC分化。将市售ECM结合到干细胞培养物中提供了有益于细胞维持的物理和化学线索。动物来源的市售基底膜产品由支持细胞维持的ECM蛋白和生长因子组成。由于ECM具有可以调节细胞命运的组织特异性特性,无异种基质用于将其转化为临床研究。虽然市售基质广泛用于hiPSC和类器官工作,这些矩阵的等价性尚未评估。这里,在四种不同的基质中,hiPSC维持和人类肠道类器官(hIO)生成的比较研究:Matrigel(Matrix1-AB),Geltrex(矩阵2-AB),Cultrex(矩阵3-AB),和体外凝胶(基质4-XF)进行。虽然殖民地缺乏完美的圆形,有最小的自发分化,其中超过85%的细胞表达干细胞标志物SSEA-4。矩阵4-XF导致3D圆形团块的形成。此外,增加用于制备基质4-XF水凝胶溶液的培养基中的补充物和生长因子的浓度将SSEA-4的hiPSC表达提高了1.3倍。与其他动物来源的基底膜相比,基质2-AB维持的hiPSC的分化导致在中肠/后肠阶段球状体释放较少。与其他人相比,无异种类器官基质(Matrix4-O3)导致更大和更成熟的hIO,表明可以利用无异种水凝胶的物理性质来优化类器官的生成。总之,结果表明,不同基质组成的变化会影响IO分化的阶段。这项研究提高了人们对商用矩阵差异的认识,并为iPSC和IO工作期间的矩阵优化提供了指导。
    Extracellular matrix (ECM) plays a critical role in cell behavior and development. Organoids generated from human induced pluripotent stem cells (hiPSCs) are in the spotlight of many research areas. However, the lack of physiological cues in classical cell culture materials hinders efficient iPSC differentiation. Incorporating commercially available ECM into stem cell culture provides physical and chemical cues beneficial for cell maintenance. Animal-derived commercially available basement membrane products are composed of ECM proteins and growth factors that support cell maintenance. Since the ECM holds tissue-specific properties that can modulate cell fate, xeno-free matrices are used to stream up translation to clinical studies. While commercially available matrices are widely used in hiPSC and organoid work, the equivalency of these matrices has not been evaluated yet. Here, a comparative study of hiPSC maintenance and human intestinal organoids (hIO) generation in four different matrices: Matrigel (Matrix 1-AB), Geltrex (Matrix 2-AB), Cultrex (Matrix 3-AB), and VitroGel (Matrix 4-XF) was conducted. Although the colonies lacked a perfectly round shape, there was minimal spontaneous differentiation, with over 85% of the cells expressing the stem cell marker SSEA-4. Matrix 4-XF led to the formation of 3D round clumps. Also, increasing the concentration of supplement and growth factors in the media used to make the Matrix 4-XF hydrogel solution improved hiPSC expression of SSEA-4 by 1.3-fold. Differentiation of Matrix 2-AB -maintained hiPSC led to fewer spheroid releases during the mid-/hindgut stage compared to the other animal-derived basement membranes. Compared to others, the xeno-free organoid matrix (Matrix 4-O3) leads to larger and more mature hIO, suggesting that the physical properties of xeno-free hydrogels can be harnessed to optimize organoid generation. Altogether, the results suggest that variations in the composition of different matrices affect stages of IO differentiation. This study raises awareness about the differences in commercially available matrices and provides a guide for matrix optimization during iPSC and IO work.
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  • 文章类型: Journal Article
    研究了通过将人细胞产物移植到免疫缺陷(NOG)小鼠中进行的当前致瘤性测试的外推性。为此,通过肝脏移植未分化的人诱导多能干细胞(hiPSCs)作为阳性对照细胞来评估NOG小鼠对畸胎瘤的易感性,纹状体,或尾静脉并评估TPD50值(在一半的移植小鼠中形成畸胎瘤所需的剂量)。然后将其与同基因或同种异体小鼠模型的TPD50进行比较。C57/BL/6(B6)-iPSC或129/Ola(129)-胚胎干细胞(ESC)移植入同系小鼠肝脏的TPD50分别为4.08×105和4.64×104,分别,而对NOG小鼠肝脏给予hiPSC的TPD50为4.64×104个细胞。B6-miPSC协同剂的TPD50,129-mESC-协同,或129细胞/B6同种异体移植入纹状体的细胞为5.09×102、1.0×104和3.73×104细胞,分别,而hiPSC/NOG小鼠为1.0×103个细胞。B6-miPSC或129-mESC同系尾静脉输注的TPD50为3.16×106或5.62×106细胞,分别,而129只小鼠中的1×107个B6-miPSC或NOG小鼠输注研究中的hiPSC未观察到发生率。尽管数据集的数量有限,这些数据表明,NOG小鼠通过肝脏或纹状体移植的未分化hiPSCs形成的畸胎瘤与同系或同种异体小鼠移植模型相当,提示当前NOG小鼠致瘤性测试的结果将提供有用的信息,以推断移植后hPSC衍生产品中残留的未分化hPSC的畸胎瘤发生率。
    The extrapolability of the current tumorigenicity test performed by transplanting human cell product into immunodeficient (NOG) mice was investigated. For this purpose, the susceptibility to form teratomas of NOG mice was assessed by transplanting undifferentiated human-induced pluripotent stem cells (hiPSCs) as positive control cells via the liver, striatum, or tail vein and evaluating the TPD50 value (dose required to form teratomas in half of the transplanted mice). This was then compared to the TPD50 of syngeneic or allogeneic mouse models. The TPD50 of C57/BL/6(B6)-iPSC or 129/Ola(129)-embryonic stem cell (ESC) transplanted into the liver of syngeneic mice was 4.08 × 105 and 4.64 × 104 cells, respectively, while the TPD50 of hiPSC administered into the liver of NOG mice was 4.64 × 104 cells. The TPD50 of B6-miPSC-synergic, 129-mESC-synergic, or 129-cell/B6 allogeneic transplantation into the striatum was 5.09 × 102, 1.0 × 104, and 3.73 × 104 cells, respectively, while that of hiPSC/NOG mice was 1.0 × 103 cells. The TPD50 for B6-miPSC or 129-mESC syngeneic tail vein infusion was 3.16 × 106 or 5.62 × 106 cells, respectively, while no incidence was observed from 1 × 107 B6-miPSCs in 129 mice or hiPSCs in NOG mice infusion study. Although the number of data sets was limited, these data indicate that the teratoma formation from transplanted undifferentiated hiPSCs via the liver or striatum in NOG mice is comparable to that in syngeneic or allogeneic mouse transplantation model, suggesting that the result of the current tumorigenicity test in NOG mice would provide useful information to infer the incidence of teratoma from residual undifferentiated hPSCs in hPSC-derived products after transplantation.
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  • 文章类型: Journal Article
    已经发现许多肿瘤药物在一部分患者中引起心脏毒性,这极大地限制了它们的临床应用,并阻碍了救生抗癌治疗的益处。人类诱导的多能干细胞衍生的心肌细胞(iPSC-CM)携带供体特异性遗传信息,并已被提出用于探索肿瘤药物诱导的心脏毒性的个体间差异。在这里,我们评估了iPSC-CM相关测定的个体间和个体内变异性,并提出了使用供体特异性iPSC-CM前瞻性预测多柔比星(DOX)诱导的心脏毒性(DIC)的概念证明。我们的发现表明,供体特异性iPSC-CM在细胞毒性和转录测定中表现出比个体内变异性更大的线间变异性。iPSC-CM的可变和剂量依赖性细胞毒性反应与临床实践中观察到的相似,并在很大程度上复制了报告的机制。通过根据iPSC-CM对DOX的时间和浓度相关表型反应将其分为抗性和敏感细胞系,我们发现供体特异性iPSC-CM对DOX的敏感性可以预测体内DIC风险.此外,我们确定了一个差异表达的基因,DNDmicroRNA介导的抑制抑制剂1(DND1),在DOX抗性和DOX敏感性iPSC-CM之间。我们的结果支持利用供体特异性iPSC-CM评估DIC的个体差异。进一步的研究将包括一大群供体特异性iPSC-CM,以鉴定潜在的新型分子和遗传生物标志物,用于预测DOX和其他肿瘤药物诱导的心脏毒性。
    Many oncology drugs have been found to induce cardiotoxicity in a subset of patients, which significantly limits their clinical use and impedes the benefit of lifesaving anticancer treatments. Human induced pluripotent stem cell-derived cardiomyocytes (iPSC-CMs) carry donor-specific genetic information and have been proposed for exploring the interindividual difference in oncology drug-induced cardiotoxicity. Herein, we evaluated the inter- and intraindividual variability of iPSC-CM-related assays and presented a proof of concept to prospectively predict doxorubicin (DOX)-induced cardiotoxicity (DIC) using donor-specific iPSC-CMs. Our findings demonstrated that donor-specific iPSC-CMs exhibited greater line-to-line variability than the intraindividual variability in impedance cytotoxicity and transcriptome assays. The variable and dose-dependent cytotoxic responses of iPSC-CMs resembled those observed in clinical practice and largely replicated the reported mechanisms. By categorizing iPSC-CMs into resistant and sensitive cell lines based on their time- and concentration-related phenotypic responses to DOX, we found that the sensitivity of donor-specific iPSC-CMs to DOX may predict in vivo DIC risk. Furthermore, we identified a differentially expressed gene, DND microRNA-mediated repression inhibitor 1 (DND1), between the DOX-resistant and DOX-sensitive iPSC-CMs. Our results support the utilization of donor-specific iPSC-CMs in assessing interindividual differences in DIC. Further studies will encompass a large panel of donor-specific iPSC-CMs to identify potential novel molecular and genetic biomarkers for predicting DOX and other oncology drug-induced cardiotoxicity.
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