hot spots

热点
  • 文章类型: Journal Article
    传染性COVID-19最近出现并演变成威胁世界的大流行。在两年前采取了严格的预防措施之后,尽管出现了致命的遗传菌株,但全球大多数活动都重新开放。在这种情况下,评估和绘制基于活动特征的热点区域促进传染病传播至关重要。因此,我们的研究问题是:如何根据商业活动的空间规划在城市内部定义COVID-19风险的潜在热点?在我们的研究中,扎耶德和十月的城市,埃及,以各种商业活动为特征,被选为试验台。首先,我们根据疾病控制和预防中心(CDCP)标准和Kriging插值方法分析了每种活动的空间和形态特征以及潜在的感染风险.然后,使用谷歌移动,以前的报告,和半结构化面试,定义了兴趣点和人口流动,并将其与最后一步相结合,作为确定热点的相互关联的水平层。验证研究比较了生成的活动风险图,空间COVID-19病例,土地利用分布采用逻辑回归(LR)和皮尔逊系数(Rxy)。通过可视化分析,我们的研究结果表明,这两个城市的中心地区,包括不相容和集中的商业活动,尽管地区的城市密度中等,但风险峰值(LR=0.903,rxy=0.78),表明仅靠城市密度不足以降低公共卫生风险。建议将基于健康观点的活动空间配置与城市密度一起作为风险评估工具,以制定适当的决策来应对大流行的城市。
    The contagious COVID-19 has recently emerged and evolved into a world-threatening pandemic outbreak. After pursuing rigorous prophylactic measures two years ago, most activities globally reopened despite the emergence of lethal genetic strains. In this context, assessing and mapping activity characteristics-based hot spot regions facilitating infectious transmission is essential. Hence, our research question is: How can the potential hotspots of COVID-19 risk be defined intra-cities based on the spatial planning of commercial activity in particular? In our research, Zayed and October cities, Egypt, characterized by various commercial activities, were selected as testbeds. First, we analyzed each activity\'s spatial and morphological characteristics and potential infection risk based on the Centre for Disease Control and Prevention (CDCP) criteria and the Kriging Interpolation method. Then, using Google Mobility, previous reports, and semi-structured interviews, points of interest and population flow were defined and combined with the last step as interrelated horizontal layers for determining hotspots. A validation study compared the generated activity risk map, spatial COVID-19 cases, and land use distribution using logistic regression (LR) and Pearson coefficients (rxy). Through visual analytics, our findings indicate the central areas of both cities, including incompatible and concentrated commercial activities, have high-risk peaks (LR = 0.903, rxy = 0.78) despite the medium urban density of districts, indicating that urban density alone is insufficient for public health risk reduction. Health perspective-based spatial configuration of activities is advised as a risk assessment tool along with urban density for appropriate decision-making in shaping pandemic-resilient cities.
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  • 文章类型: Journal Article
    Thousands of deaths associated with air pollution each year could be prevented by forecasting the behavior of factors that pose risks to people\'s health and their geographical distribution. Proximity to pollution sources, degree of urbanization, and population density are some of the factors whose spatial distribution enables the identification of possible influence on the presence of respiratory diseases (RD). Currently, Bogotá is among the cities with the poorest air quality in Latin America. Specifically, the locality of Kennedy is one of the zones in the city with the highest recorded concentration levels of local pollutants over the last 10 years. From 2009 to 2016, there were 8619 deaths associated with respiratory and cardiovascular diseases in the locality. Given these characteristics, this study set out to identify and analyze the areas in which the primary socioeconomic and environmental conditions contribute to the presence of symptoms associated with RD. To this end, information collected in field by performing georeferenced surveys was analyzed through geostatistical and machine learning tools which carried out cluster and pattern analyses. Random forests and AdaBoost were applied to establish hot spots where RD could occur, given the conjugation of predictor variables in the micro-territory. It was found that random forests outperformed AdaBoost with 0.63 AUC. In particular, this study\'s approach applies to densely populated municipalities with high levels of air pollution. In using these tools, municipalities can anticipate environmental health situations and reduce the cost of respiratory disease treatments.
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  • 文章类型: Journal Article
    Understanding which drivers cause diversity patterns is a key issue in conservation. Here we applied a spatially explicit model to predict marine benthic diversity patterns according to environmental factors in the NW Mediterranean Sea. While most conservation-oriented diversity studies consider species richness only and neglect equitability, we measured separately species richness, equitability, and \'overall\' diversity (i.e., the Shannon-Wiener H\' function) on a dataset of 890 benthic species × 209 samples. Diversity values were predicted by means of Random Forest regression, on the basis of 10 factors: depth, distance from the coast, distance from the shelf break, latitude, sea-floor slope, sediment grain size, sediment sorting, distance from harbours and marinas, distance from rivers, and sampling gear. Predictions by Random Forests were accurate, the main predictors being latitude, sediment grain size, depth and distance from the coast. Based on predicted values, diversity hotspots were identified as those localities where indices were in the 15% top segment of ranked values. Only a minority of the diversity hotspots was included within the boundaries of the protection institutes established in the region. Marine protected areas are often created in sites harbouring important coastal habitats, which risks neglecting the diversity hidden in the sedimentary seafloor. We suggest that marine protected areas should accommodate portions of sedimentary habitat within their boundaries to improve diversity conservation.
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  • 文章类型: Journal Article
    To verify the feasibility of portable X-ray fluorescence (PXRF) for rapidly analyzing, assessing and improving soil heavy metals mapping, 351 samples were collected from Fuyang District, Hangzhou City, in eastern China. Ordinary kriging (OK) and co-ordinary kriging (COK) combined with PXRF measurements were used to explore spatial patterns of heavy metals content in the soil. The Getis-Ord index was calculated to discern hot spots of heavy metals. Finally, multi-variable indicator kriging was conducted to obtain a map of multi-heavy metals pollution. The results indicated Cd is the primary pollution element in Fuyang, followed by As and Pb. Application of PXRF measurements as covariates in COK improved model accuracy, especially for Pb and Cd. Heavy metals pollution hot spots were mainly detected in northern Fuyang and plains along the Fuchun River in southern Fuyang because of mining, industrial and traffic activities, and irrigation with polluted water. Area with high risk of multi-heavy metals pollution mainly distributed in plain along the Fuchun River and the eastern Fuyang. These findings certified the feasibility of using PXRF as an efficient and reliable method for soil heavy metals pollution assessment and mapping, which could contribute to reduce the cost of surveys and pollution remediation.
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  • 文章类型: Journal Article
    根据蛋白质的氨基酸序列和已知同源物的结构正确预测蛋白质的缔合状态是计算生物学的重要目标。我们以邻氨基苯甲酸磷酸核糖基转移酶(AnPRT)为例追求这一目标,一种参与氨基酸色氨酸生物合成的酶。首先,使用蛋白质界面分析了天然同源二聚体AnPRT的已知晶体结构,Surfaces,和欧洲生物信息学研究所(EBI)的大会(PISA)服务。这导致鉴定了蛋白质-蛋白质界面中的两个疏水性“热点”氨基酸,这些氨基酸被预测为自缔合所必需。接下来,在全面的多序列比对(MSA)中,鉴定了天然存在的AnPRT变体,其在两个热点位置中具有亲水或带电荷的氨基酸代替疏水残基。代表性变体的特征在于热稳定性,酶活性,和第四纪结构。我们发现在两个热点位置具有带电荷残基的AnPRT变体仅作为单体存在于溶液中。在一个热点位置具有亲水性氨基酸的变体以两种形式出现,单体和二聚体。本研究的结果提供了AnPRT单体-二聚体平衡的决定因素的详细表征,并表明与MSA结合的热点分析可能是预测蛋白质四级结构的有价值的工具。
    It is an important goal of computational biology to correctly predict the association state of a protein based on its amino acid sequence and the structures of known homologues. We have pursued this goal on the example of anthranilate phosphoribosyltransferase (AnPRT), an enzyme that is involved in the biosynthesis of the amino acid tryptophan. Firstly, known crystal structures of naturally occurring homodimeric AnPRTs were analyzed using the Protein Interfaces, Surfaces, and Assemblies (PISA) service of the European Bioinformatics Institute (EBI). This led to the identification of two hydrophobic \"hot spot\" amino acids in the protein-protein interface that were predicted to be essential for self-association. Next, in a comprehensive multiple sequence alignment (MSA), naturally occurring AnPRT variants with hydrophilic or charged amino acids in place of hydrophobic residues in the two hot spot positions were identified. Representative variants were characterized in terms of thermal stability, enzymatic activity, and quaternary structure. We found that AnPRT variants with charged residues in both hot spot positions exist exclusively as monomers in solution. Variants with hydrophilic amino acids in one hot spot position occur in both forms, monomer and dimer. The results of the present study provide a detailed characterization of the determinants of the AnPRT monomer-dimer equilibrium and show that analysis of hot spots in combination with MSAs can be a valuable tool in prediction of protein quaternary structures.
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  • 文章类型: Comparative Study
    回顾肾神经解剖学和生理学基础知识,探索全局与选择性肾神经去神经(RDN)揭示了非靶向性肾神经消融的一些基本局限性和选择性RDN的潜在优越性。
    最近测试RDN功效的试验显示结果好坏参半。初步研究以全球RDN为治疗目标。重复观察到对RDN的异质性反应,包括缺乏BP降低的无应答者,或者更令人不安的是,RDN后的BP升高引起了对非选择性全局RDN的有害影响的关注。随后的研究表明,异质纤维群的存在以及肾神经刺激对识别交感神经刺激纤维或“热点”的潜在效用。“认识到RDN可以产生异质传入交感神经效应,既改变了治疗目标,又恢复了治疗性RDN的潜力,从而提供了显着的临床益处。肾神经刺激已成为识别交感神经刺激纤维的潜在工具,避免交感神经抑制纤维,从而引导选择性RDN。
    Review the renal nerve anatomy and physiology basics and explore the concept of global vs. selective renal denervation (RDN) to uncover some of the fundamental limitations of non-targeted renal nerve ablation and the potential superiority of selective RDN.
    Recent trials testing the efficacy of RDN showed mixed results. Initial investigations targeted global RDN as a therapeutic goal. The repeat observation of heterogeneous response to RDN including non-responders with lack of a BP reduction, or even more unsettling, BP elevations after RDN has raised concern for the detrimental effects of unselective global RDN. Subsequent studies have suggested the presence of a heterogeneous fiber population and the potential utility of renal nerve stimulation to identify sympatho-stimulatory fibers or \"hot spots.\" The recognition that RDN can produce heterogeneous afferent sympathetic effects both change therapeutic goals and revitalize the potential of therapeutic RDN to provide significant clinical benefits. Renal nerve stimulation has emerged as potential tool to identify sympatho-stimulatory fibers, avoid sympatho-inhibitory fibers, and thus guide selective RDN.
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  • 文章类型: Letter
    A high-performance ionic-sensing platform has been developed by an interdisciplinary approach, combining the classical colorimetric Griess reaction and new concepts of nanotechnology, such as plasmonic coupling of nanoparticles and surface-enhanced Raman scattering (SERS) spectroscopy. This approach exploits the advantages of combined SERS/surface-enhanced resonant Raman Scattering (SERRS) by inducing the formation of homogeneous hot spots and a colored complex in resonance with the laser line, to yield detection limits for nitrite down to the subpicomolar level. The performance of this new method was compared with the classical Griess reaction and ionic chromatography showing detection limits about 6 and 3 orders of magnitude lower, respectively.
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