homologous recombination

同源重组
  • 文章类型: Case Reports
    免疫检查点抑制剂(ICIs)和聚(ADP-核糖)聚合酶(PARP)抑制剂已经在各种肿瘤中显示出功效。使用ICIs或PARP抑制剂作为单一疗法的重要治疗挑战是由于固有的原发性抗性或在一段时间的应答性后发展为继发性获得性抗性的治疗失败。PARP抑制剂和ICI的组合可以通过增强治疗反应来减轻这种情况。我们描述了一名83岁的男性患者,最初表现为腹痛,和体重减轻以及交替便秘和腹泻。影像学和活检显示转移性食管腺癌。基因组检测显示种系BRCA2突变。患者最初接受了几个周期的化学免疫疗法。然而,由于对化疗的不耐受,患者的病例在多学科分子肿瘤委员会进行了讨论。他改用PARP抑制剂奥拉帕尼和ICI纳武单抗。这种组合导致了持久的完整响应。聚ADP核糖聚合酶抑制剂(PARPi)加ICI的组合可能通过各种机制协同作用,包括增强的新抗原表达,释放免疫激活细胞因子,和增加程序性死亡配体1表达。这可能最终导致具有可管理的安全性的增强的疗效结果。在我们的案例中,ICI和PARPi的这种特殊反应与这种组合的协同价值是一致的,和前瞻性研究有必要明确表征临床效用。
    Immune checkpoint inhibitors (ICIs) and poly (ADP-ribose) polymerase (PARP) inhibitors have shown efficacy in various tumors. A significant therapeutic challenge with either ICIs or PARP inhibitors as monotherapy is treatment failure from intrinsic primary resistance or the development of secondarily acquired resistance after a period of responsiveness. The combination of PARP inhibitors and ICIs could mitigate this by potentiating treatment response. We describe an 83-year-old male patient who initially presented with abdominal pain, and weight loss along with alternating constipation and diarrhea. Imaging and biopsy revealed metastatic esophageal adenocarcinoma. Genomic testing revealed germline BRCA2 mutation. The patient initially underwent a few cycles of chemoimmunotherapy. However, due to intolerance to chemotherapy, the patient\'s case was discussed at a multidisciplinary molecular tumor board. He was switched to PARP inhibitor olaparib and ICI nivolumab. This combination led to a durable complete response. A combination of poly-ADP ribose polymerase inhibitor (PARPi) plus ICI may work in synergy through various mechanisms including enhanced neoantigen expression, release of immune-activating cytokines, and increased programmed death-ligand 1 expression. This may culminate in accentuated efficacy outcomes with a manageable safety profile. This exceptional response with ICI and PARPi in our case is consistent with the synergistic value of this combination, and prospective studies are warranted to definitively characterize clinical utility.
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  • 文章类型: Case Reports
    Lurbinectedin负责DNA识别和结合,产生双链DNA(dsDNA)的断裂,从而导致细胞凋亡。对lurbinectedin的敏感性与核苷酸切除修复(NER)系统有关。此外,伊立替康,拓扑异构酶I抑制剂,引起dsDNA断裂,可以使用lurbinectedin增强消除NER系统。BRCA突变患者,已经用铂类药物治疗,遭受DNA损伤的人,无法修复由于lurbinectedin交互而导致的中断,而伊立替康引起dsDNA断裂,促进合成致死性。本文描述了在BRCA突变的铂耐药卵巢癌患者中,单独对lurbinectedin的异常反应以及与伊立替康的关联。一名44岁的BRCA1突变的卵巢癌患者在第六行接受lurbinectedin和伊立替康治疗,进一步进展时间(TTFP)等于8个月。在我们的案例中,与伊立替康的联合克服了单独对lurbinectedin的抗药性。总之,lurbinectedin和伊立替康在铂耐药患者中表现出了有希望的反应。然而,应进行进一步的研究以验证我们的发现,未来的试验对于进一步确定lurbinectedin的临床应用将是重要的.
    Lurbinectedin is responsible for DNA recognition and binding, producing double-strand DNA (dsDNA) breaks thus resulting in apoptosis. Sensitivity to lurbinectedin is linked to the nucleotide excision repair (NER) system. Furthermore, irinotecan, a topoisomerase I inhibitor, provokes dsDNA breaks that could be reinforced abrogating the NER system using lurbinectedin. BRCA-mutated patients, already treated with platinum-derived drugs, who suffered DNA damage, cannot repair the breaks due to lurbinectedin interaction, whereas irinotecan provokes a dsDNA break that promotes synthetic lethality. This article describes an exceptional response to lurbinectedin alone followed by the association with irinotecan in a BRCA-mutated platinum-resistant ovarian cancer patient. A 44-year-old BRCA1-mutated ovarian cancer patient was treated in sixth line with lurbinectedin and irinotecan with a time to further progression (TTFP) equal to 8 months. In our case, the association with irinotecan overcame the resistance to lurbinectedin alone. In conclusion, lurbinectedin and irinotecan demonstrated a promising response in platinum-resistant patients. However, further studies should be conducted to validate our findings and future trials will be important to further define the clinical utility of lurbinectedin.
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  • 文章类型: Journal Article
    同源重组(HR)是修复双链断裂以维持基因组完整性和DNA稳定性免受细胞毒性作用和突变的重要机制之一。各种研究报道,HR相关基因中的单核苷酸多态性(SNP)可能与卵巢癌(OCa)风险显着相关,但结果尚无定论。在本研究中,在200例OCa病例和200例健康个体中,通过等位基因歧视分析对HR相关基因的五个多态性(RAD51,XRCC2和XRCC3)进行了基因分型。通过非条件逻辑回归分析评估与OCa风险的相关性。结果表明,RAD51基因rs1801320(CC)和rs1801321(TT)的突变等位基因均与OCa的风险增加有关(比值比[OR]3.79,95%置信区间[CI]1.21-11.78,p=0.014和OR1.61,95%CI1.06-2.45,p=0.025)。此外,观察到XRCC2基因rs3218536的TT等位基因(OR4.68,95%CI1.27-17.15,p=0.011)与OCa显著相关。分层分析结果表明,初潮早期和第3期和第4期患者与RAD51基因的rs1801321和XRCC3基因的rs1799794相关。在硅分析预测,两个错义SNP(rs3218536和rs1799794)被发现对蛋白质结构有影响,稳定性和功能。本研究表明,RAD51和XRCC2基因多态性可能对南印度人群的OCa风险产生影响。然而,需要对更大样本和不同人群的研究来支持这些结论。
    Homologous recombination (HR) is one of the important mechanisms in repairing double-strand breaks to maintain genomic integrity and DNA stability from the cytotoxic effects and mutations. Various studies have reported that single nucleotide polymorphisms (SNPs) in the HR-associated genes may have a significant association with ovarian cancer (OCa) risk but the results were inconclusive. In the present study, five polymorphisms of HR-associated genes (RAD51, XRCC2 and XRCC3) were genotyped by allelic discrimination assay in 200 OCa cases and 200 healthy individuals. The association with OCa risk was evaluated by unconditional logistic regression analyses. The results revealed that the mutant allele in both rs1801320 (CC) and rs1801321 (TT) of RAD51 gene was associated with increased risk of OCa (odds ratio [OR] 3.79, 95% confidence interval [CI] 1.21-11.78, p = 0.014 and OR 1.61, 95% CI 1.06-2.45, p = 0.025, respectively). Moreover, a significant association of TT allele (OR 4.68, 95% CI 1.27-17.15, p = 0.011) of rs3218536 of XRCC2 gene with OCa was observed. Stratified analysis results showed that patients with early menarche and stages 3 and 4 were found to be associated with rs1801321 of RAD51 gene and rs1799794 of XRCC3 gene. In silico analysis predicted that the two missense SNPs (rs3218536 and rs1799794) were found to have an impact on the protein structure, stability and function. The present study suggested that RAD51 and XRCC2 gene polymorphisms might have an impact on the OCa risk in the South Indian population. However, studies with a larger sample and on different populations are needed to support the conclusions.
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  • 文章类型: Journal Article
    To compare the frequencies of somatic homologous recombination (HR) gene mutations identified in next-generation sequencing (NGS) genomic profiling of uterine serous carcinomas (USCs) and high-grade serous ovarian carcinomas (HGSOCs).
    Data for this analysis was obtained from AACR Project GENIE, a multi-institutional dataset of clinical-grade NGS genomic profiling results for many cancer sites and histologic subtypes, through cBioPortal. Patient/specimen groups used for analysis were USC and HGSOC. 14 HR genes were queried for each group with respect to mutation frequency. For each HR gene, the difference in mutation frequency between the two groups was evaluated using Fisher\'s exact test. The threshold for statistical significance was p-value < .05.
    In the USC group, there were 457 samples from 451 patients. In the HGSOC group, there were 1537 samples from 1515 patients. The most frequently mutated HR gene for USC was BRCA2 (4.84%) and for HGSOC was BRCA1 (9.07%). Mutation frequency was significantly different between USC and HGSOC for BRCA 1 (p < .001) and BRCA2 (p = .0379). For the 12 non-BRCA HR genes, mutation frequency was not significantly different between USC and HGSOC. The rate of patients with at least one HR gene mutation in their profiled tumor was 16.85% for USC and 25.21% of HGSOC. Most USC patients with a somatic HR mutation had only one HR gene mutated.
    Somatic HR gene mutations were commonly identified in NGS genomic profiling of USC. Mutation frequencies for non-BRCA HR genes were not significantly different between USC and HGSOC. These data add to the growing rationale for HR deficiency tumor testing and targeting (e.g., with PARP inhibitors) in future clinical trial development for women with USC.
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  • 文章类型: Historical Article
    合作研究为任何一个实验室都无法实现的突破打开了大门。在这里,我们描述了Griffith和deLange实验室之间的最初合作,这些合作导致了将端粒作为同源重组的DNA模板的思考,端粒循环的提议,和t环的第一张电子显微照片。随后是合作,揭示了整个真核细胞门的t环。Griffith和Tomáška/Nosek的合作揭示了源自非常规酵母线性线粒体染色体的环状端粒DNA(t环),这刺激了ALT阳性人类细胞中t-圈的发现。Griffith和McEachern实验室之间的合作工作证明了一系列酵母物种中的t环和t环。然后,deLange和Zhuang实验室应用超分辨率光学显微镜来证明TRF2在环路形成中的遗传作用。格里菲斯实验室最近的工作将端粒转录与t环形成联系起来,提供了一种新的t环连接模型。Cesare和Gaus实验室之间最近的合作利用超分辨率光学显微镜来提供有关t环作为保护元素的详细信息。其次是Boulton和Cesare实验室,展示了TRF2和RTEL的细胞周期调节如何使t环开放和重整促进端粒复制。在发现t环20年后,作为合作分子生物学的案例研究,我们反思了他们研究的集体历史。
    Collaborative studies open doors to breakthroughs otherwise unattainable by any one laboratory alone. Here we describe the initial collaboration between the Griffith and de Lange laboratories that led to thinking about the telomere as a DNA template for homologous recombination, the proposal of telomere looping, and the first electron micrographs of t-loops. This was followed by collaborations that revealed t-loops across eukaryotic phyla. The Griffith and Tomáška/Nosek collaboration revealed circular telomeric DNA (t-circles) derived from the linear mitochondrial chromosomes of nonconventional yeast, which spurred discovery of t-circles in ALT-positive human cells. Collaborative work between the Griffith and McEachern labs demonstrated t-loops and t-circles in a series of yeast species. The de Lange and Zhuang laboratories then applied super-resolution light microscopy to demonstrate a genetic role for TRF2 in loop formation. Recent work from the Griffith laboratory linked telomere transcription with t-loop formation, providing a new model of the t-loop junction. A recent collaboration between the Cesare and Gaus laboratories utilized super-resolution light microscopy to provide details about t-loops as protective elements, followed by the Boulton and Cesare laboratories showing how cell cycle regulation of TRF2 and RTEL enables t-loop opening and reformation to promote telomere replication. Twenty years after the discovery of t-loops, we reflect on the collective history of their research as a case study in collaborative molecular biology.
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  • 文章类型: Case Reports
    雌激素受体(ER)阳性转移性乳腺癌和种系BRCA1/2突变患者对内分泌治疗的敏感性尚未完全阐明。此外,在BRCA1/2突变携带者中,CDK4/6抑制剂联合内分泌治疗的注册试验缺乏预先指定的亚组分析.我们报告了两名BRCA突变患者的临床病史,来曲唑加CDK4/6抑制剂palbociclib治疗ER阳性转移性乳腺癌。在两种情况下观察到的治疗结果的生物学和临床意义与迄今为止可用的科学证据的知识进行了讨论。总的来说,生物学原理,临床前,和临床数据支持CDK4/6抑制剂加内分泌治疗的突出作用,即使与PARP抑制剂联合使用,在BRCA突变的治疗中,ER阳性乳腺癌。然而,细胞周期蛋白/CDK途径之间的相互作用,ER和BRCA很复杂,到目前为止有证据报道,虽然可靠,等待未来随机临床试验的确认。
    Sensitivity to endocrine therapy of patients with estrogen receptor (ER)-positive metastatic breast cancer and germline BRCA1/2 mutations is not yet fully elucidated. Furthermore, the registration trials of CDK 4/6 inhibitors in combination with endocrine therapy lacked of a pre-specified subgroup analysis in BRCA1/2 mutation carriers. We report clinical history of two patients with BRCA-mutated, ER-positive metastatic breast cancer treated with letrozole plus the CDK 4/6 inhibitor palbociclib. Biological and clinical implications of the treatment outcome observed in the two cases are discussed with the knowledge of scientific evidence to date available. Overall, biological rationale, preclinical, and clinical data support the prominent role of CDK 4/6 inhibitors plus endocrine therapy, even in combination with PARP inhibitors, in the treatment of BRCA-mutated, ER-positive breast cancers. However, the interaction between Cyclin/CDK pathway, ER and BRCA is complex and evidences reported so far, albeit reliable, await confirmation in the context of future randomized clinical trials.
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  • 文章类型: Journal Article
    X-射线修复交叉互补组3(XRCC3)是同源重组的有效组分,并且是在哺乳动物细胞中保持染色体完整性所必需的。该基因中的Thr241Met单核苷酸多态性(SNP)与乳腺癌易感性之间的关联已在多项研究中进行了评估。然而,报道有争议。本荟萃分析旨在确定该SNP是否与乳腺癌易感性相关。
    我们进行了系统评价和荟萃分析,以检索关于T241MSNP与乳腺癌风险之间关联的病例对照研究。计算粗比值比(OR)和95%置信区间(CI)以验证显性关联,隐性,和纯合子遗传模型。
    我们纳入了55项研究,包含30,966例散发性乳腺癌病例,荟萃分析中的1174例家族性乳腺癌病例和32,890例对照。在粗略的分析中,未检测到上述SNP与隐性乳腺癌风险之间的关联,纯合子或显性模型。然而,基于种族的分析表明,在散发性乳腺癌中,SNP与纯合子阿拉伯人群的乳腺癌风险相关(OR(95%CI)=3.649(2.029-6.563),p=0.0001)和隐性模型(OR(95%CI)=4.092(1.806-9.271),p=0.001)。在显性模型的亚洲人群中,这种关联是显着的(OR(95%CI)=1.296,p=0.029)。然而,在纯合子和隐性模型中,家族性乳腺癌在基于种族的混合亚组中的相关性是显着的(OR(95%CI)=0.451(0.309-0.659),p=0.0001,OR(95%CI)=0.462(0.298-0.716),p分别=0.001)。
    合照,我们在大量散发性和家族性乳腺癌病例样本中的结果显示,Thr241Met在此类恶性肿瘤的发病机制中作用不显著.这样的结果在零星病例中更具决定性。在家族性病例中,需要未来的研究来验证我们的结果.
    The X-ray repair cross-complementing group 3 (XRCC3) is an efficient component of homologous recombination and is required for the preservation of chromosomal integrity in mammalian cells. The association between Thr241Met single-nucleotide polymorphism (SNP) in this gene and susceptibility to breast cancer has been assessed in several studies. Yet, reports are controversial. The present meta-analysis has been designed to identify whether this SNP is associated with susceptibility to breast cancer.
    We performed a systematic review and meta-analysis for retrieving the case-control studies on the associations between T241 M SNP and the risk of breast cancer. Crude odds ratios (ORs) and 95% confidence intervals (CIs) were calculated to verify the association in dominant, recessive, and homozygote inheritance models.
    We included 55 studies containing 30,966 sporadic breast cancer cases, 1174 familial breast cancer cases and 32,890 controls in the meta-analysis. In crude analyses, no association was detected between the mentioned SNP and breast cancer risk in recessive, homozygote or dominant models. However, ethnic based analysis showed that in sporadic breast cancer, the SNP was associated with breast cancer risk in Arab populations in homozygous (OR (95% CI) = 3.649 (2.029-6.563), p = 0.0001) and recessive models (OR (95% CI) = 4.092 (1.806-9.271), p = 0.001). The association was significant in Asian population in dominant model (OR (95% CI) = 1.296, p = 0.029). However, the associations was significant in familial breast cancer in mixed ethnic-based subgroup in homozygote and recessive models (OR (95% CI) = 0.451 (0.309-0.659), p = 0.0001, OR (95% CI) = 0.462 (0.298-0.716), p = 0.001 respectively).
    Taken together, our results in a large sample of both sporadic and familial cases of breast cancer showed insignificant role of Thr241Met in the pathogenesis of this type of malignancy. Such results were more conclusive in sporadic cases. In familial cases, future studies are needed to verify our results.
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  • 文章类型: Case Reports
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  • 文章类型: Journal Article
    Primary Ovarian Insufficiency (POI) affects ~1% of women under forty. Exome sequencing of two Finnish sisters with non-syndromic POI revealed a homozygous mutation in FANCM, leading to a truncated protein (p.Gln1701*). FANCM is a DNA-damage response gene whose heterozygous mutations predispose to breast cancer. Compared to the mother\'s cells, the patients\' lymphocytes displayed higher levels of basal and mitomycin C (MMC)-induced chromosomal abnormalities. Their lymphoblasts were hypersensitive to MMC and MMC-induced monoubiquitination of FANCD2 was impaired. Genetic complementation of patient\'s cells with wild-type FANCM improved their resistance to MMC re-establishing FANCD2 monoubiquitination. FANCM was more strongly expressed in human fetal germ cells than in somatic cells. FANCM protein was preferentially expressed along the chromosomes in pachytene cells, which undergo meiotic recombination. This mutation may provoke meiotic defects leading to a depleted follicular stock, as in Fancm-/- mice. Our findings document the first Mendelian phenotype due to a biallelic FANCM mutation.
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  • DOI:
    文章类型: English Abstract
    To gain further understanding of egg case silk proteins gene family, Zhao et al. isolated two full-length cDNAs for egg case silk proteins, cylindrical silk protein 1 (CySpl) and cylindrical silk protein 2 (CySp2), from the wasp spider, Argiope bruennichi. CySp2 was reported to contain no apparent signal peptide sequences, and the CySp1-CySp2 complex, which would possess a signal peptide, would be transported across the endoplasmic reticulum and secreted to the Golgi. Genomic DNA sequencing is one approach that can be successfully utilized to retrieve 5\' ends of silk genes; using this method, we retrieved the 5\' end of CySp2. We found that CySp2 contained a typical signal peptide similar to that found in CySp1; thus, due to technical limitations, an artificial error had occurred in the CySp2 sequence reported by Zhao et al.
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