heterozygosity

杂合性
  • 文章类型: Journal Article
    在患有上皮性卵巢癌(EOC)的女性中,很少报道BRCA1和BRCA2基因中致病性变异的携带者为双突变(BRCA1/2DM)。
    我们回顾了英文文献,并询问了三个报告携带BRCA1/2DM的EOC患者的资料库。将36例携带种系BRCA1/2DM的EOC患者的临床病理参数与COEUR队列中具有已知种系BRCA1/BRCA2突变携带者状态的高级别浆液性EOC女性进行了比较(n=376例非携带者,n=65BRCA1和n=38BRCA2)。评估的临床病理参数是诊断时的年龄,疾病阶段,杂合性丢失,突变类型,免疫组织化学谱,进展发生和生存。
    BRCA1/2DM患者诊断年龄中位数为51.9岁,类似于BRCA1突变携带者(49.7年,p=.58),并且比BRCA2突变携带者年轻(58.1岁,p=.02)。大多数患者被诊断为晚期(III-IV;82%),并且是创始人/频繁突变的携带者(69%)。组织免疫染色显示无孕激素受体表达和低上皮内炎症。5年生存率(60%)明显低于BRCA2突变携带者(76%,p=.03),但不是BRCA1突变携带者(51%,p=.37)。
    我们的数据表明两种突变都有一定的共显性效应,但这些患者的预后与BRCA1突变携带者的预后因素更为相似。
    Carriers of pathogenic variants in both BRCA1 and BRCA2 genes as a double mutation (BRCA1/2 DM) have been rarely reported in women with epithelial ovarian cancer (EOC).
    We reviewed the English literature and interrogated three repositories reporting EOC patients carrying BRCA1/2 DM. The clinicopathological parameters of 36 EOC patients carrying germline BRCA1/2 DM were compared to high-grade serous EOC women of the COEUR cohort with known germline BRCA1/BRCA2 mutation carrier status (n = 376 non-carriers, n = 65 BRCA1 and n = 38 BRCA2). Clinicopathological parameters evaluated were age at diagnosis, stage of disease, loss of heterozygosity, type of mutation, immunohistochemistry profile, progression occurrence and survival.
    Median age at diagnosis of BRCA1/2 DM patients was 51.9 years, similar to BRCA1 mutation carriers (49.7 years, p = .58) and younger than BRCA2 mutation carriers (58.1 years, p = .02). Most patients were diagnosed at advanced stage (III-IV; 82%) and were carriers of founder/frequent mutations (69%). Tissue immunostainings revealed no progesterone receptor expression and low intraepithelial inflammation. The 5-year survival rate (60%) was significantly lower than that of BRCA2 mutation carriers (76%, p = .03) but not of BRCA1 mutation carriers (51%, p = .37).
    Our data suggests some co-dominant effect of both mutations but the outcome of these patients more closely resembled that of BRCA1 mutation carriers with poor prognosis factors.
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  • 文章类型: Journal Article
    METHODS: Monogenic diseases are important models for the study of neurodegenerative diseases, such as Parkinson\'s disease (PD) and dementia. Notably, for some disorders, homozygosity is associated with a complex metabolic disease, while heterozygosity predisposes to late-onset neurodegeneration. For instance, biallelic glucocerebrosidase gene mutations cause Gaucher\'s disease, while heterozygous mutations are a common genetic risk factor for late-onset PD. Little is known about similar risks of related diseases, such as Niemann-Pick type C (NPC). Given that both conditions map into related, i.e., lysosomal, pathways, we hypothesize a similar risk of single-NPC gene mutations. Indeed, there is increasing evidence based on clinical observations in humans and animal studies. Here we review the current knowledge of NPC heterozygosity.
    RESULTS: Family history studies suggest a high proportion of late-onset neurodegenerative diseases in NPC families. We identified 19 cases with heterozygous NPC mutations in the literature who presented with a neurodegenerative disease, including levodopa-responsive PD, atypical parkinsonism (PSP, CBD), dystonia or dementia with a mean age at onset of about 57 years (range 8-87). Consistent splenomegaly and mildly abnormal filipin staining results have also been reported in heterozygous gene mutation carriers. Imaging and pathological data support this notion.
    CONCLUSIONS: This finding has wider implications in so far as NPC-related forms of Parkinsonian syndromes, dementia, motor neuron disease and other neurodegenerative disorders may benefit from NPC-mechanistic therapies, in particular related to lysosomal dysfunction. Further research is warranted to generate systematic data of heterozygous mutation carriers, including longitudinal data.
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  • 文章类型: Journal Article
    在微卫星标记开发过程中,研究人员必须从一组可能的引物对中进行选择,以进一步测试他们感兴趣的物种。在许多情况下,目标是最大化可检测的遗传变异水平。为了指导研究人员并确定哪些标记与更高水平的遗传变异相关,我们基于1997-2012年发表的6782个基因组微卫星标记进行了文献综述.我们检查了具有以下标记特征的杂合性(He或Ho)或等位基因数(A)之间的关系:重复类型,图案长度,主题区域,重复频率,和微卫星大小。还分析了分类学组之间的差异。A和He的不完美重复类型和完美重复类型之间存在显着差异。二核苷酸基序表现出明显较高的A,He,和Ho比大多数其他图案。重复频率和基序区域与A呈正相关,He,和Ho,但与微卫星大小的相关性很小。较高的分类群体在文献中不成比例地代表,并且几乎没有一致性。总之,研究人员应该仔细考虑标记的特征,这样他们就可以根据所需的应用进行定制。如果研究人员的目标是高遗传变异,具有大重复频率的二核苷酸基序长度可能是最好的。
    During microsatellite marker development, researchers must choose from a pool of possible primer pairs to further test in their species of interest. In many cases, the goal is maximizing detectable levels of genetic variation. To guide researchers and determine which markers are associated with higher levels of genetic variation, we conducted a literature review based on 6782 genomic microsatellite markers published from 1997-2012. We examined relationships between heterozygosity (H e or H o) or allele number (A) with the following marker characteristics: repeat type, motif length, motif region, repeat frequency, and microsatellite size. Variation across taxonomic groups was also analyzed. There were significant differences between imperfect and perfect repeat types in A and H e. Dinucleotide motifs exhibited significantly higher A, H e, and H o than most other motifs. Repeat frequency and motif region were positively correlated with A, H e, and H o, but correlations with microsatellite size were minimal. Higher taxonomic groups were disproportionately represented in the literature and showed little consistency. In conclusion, researchers should carefully consider marker characteristics so they can be tailored to the desired application. If researchers aim to target high genetic variation, dinucleotide motif lengths with large repeat frequencies may be best.
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