genomic structural variation

基因组结构变异
  • 文章类型: Case Reports
    颈项半透明度(NT)的增加导致胎儿结构异常的高风险。妊娠11至14周之间的测量是相关染色体异常的可靠标记。这里,我们介绍了1例33岁女性,在胎龄12周时,孤立的高NT为5.6mm.对她的染色体和结构异常进行了评估,并进行了细致的随访。所有测试均未显示任何染色体或明显的结构异常。胎儿超声心动图显示无结构性心脏缺陷。怀孕顺利,她通过下(子宫)段剖宫产术在足月分娩了一个健康的婴儿。女婴身体健康,没有任何发育异常。尽管NT增加存在染色体/结构缺陷的高风险,在没有彻底评估的情况下终止妊娠不是强制性的。
    Increased nuchal translucency (NT) leads to a higher risk of fetal structural abnormalities. The measurement between 11 and 14 weeks gestation is a reliable marker for associated chromosomal abnormalities. Here, we present the case of a 33-year-old female with isolated high NT in the range of 5.6 mm at 12 weeks of gestational age. She was evaluated for chromosomal and structural abnormality and followed up meticulously. None of the tests showed any chromosomal or obvious structural abnormality. Fetal echocardiography revealed no structural cardiac defect. The pregnancy was uneventful and she delivered a healthy baby at term through lower (uterine)-segment cesarean section. The baby girl is living in good health without any developmental abnormalities. Although there is a high risk of chromosomal/structural defects with increased NT, it is not mandatory to terminate the pregnancy without a thorough evaluation.
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  • 文章类型: Case Reports
    耳背骨形态发生蛋白结合内皮调节因子(BMPER)和坐骨脊髓发育不良(ISD)是罕见的骨骼发育不良。有一个连续的临床表现,DSD处于光谱的严重末端,而ISD则朝向温和末端。两者都是由于BMPER中的致病变体引起的。先前的研究报告了来自13个家庭的20名患者。到目前为止报告的队列中的共同特征是脊柱和肋骨异常,但其他发现说明了表型变异。生存范围从新生儿期内的死亡到19岁的存活和良好。我们展示了三个具有可变表型的兄弟姐妹,增加了BMPER相关骨骼发育不良的单一定义的证据。我们强调需要持续的护理计划和谨慎的预后,由临床团队定期审查。
    Diaphonospondylodysotosis (DSD) and ischiospinal dysostosis (ISD) are rare skeletal dysplasias with variants in the bone morphogenetic protein-binding endothelial regulator (BMPER). There is a continuum of clinical presentation, with DSD at the severe end of the spectrum whilst ISD is towards the milder end. Both are caused due to pathogenic variants in BMPER. Previous studies have reported 20 patients from 13 families. Common features in the cohort reported so far are spinal and rib anomalies but other findings illustrate phenotypic variation. Survival ranges from death within the neonatal period to alive and well at 19 years. We present three siblings with variable phenotype, adding to the evidence for a single definition of BMPER-related skeletal dysplasia. We highlight the need for ongoing care planning and guarded prognostication, with regular review by clinical teams.
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  • 文章类型: Journal Article
    The dynamics of long-terminal-repeat retrotransposons in two poplar species (Populus deltoides and P. nigra) and in an interspecific hybrid, recently synthesized, were investigated by analyzing the genomic abundance and transcription levels of a collection of 828 full-length retroelements identified in the genome sequence of P. trichocarpa, all occurring also in the genomes of P. deltoides and P. nigra. Overall, genomic abundance and transcription levels of many retrotransposons in the hybrid resulted higher or lower than expected by calculating the mean of the parental values. A bioinformatics procedure was established to ascertain the occurrence of the same retrotransposon loci in the three genotypes. The results indicated that retrotransposon abundance variations between the hybrid and the mean value of the parents were due to i) co-segregation of retrotransposon high- or low-abundant haplotypes; ii) new retroelement insertions; iii) retrotransposon loss. Concerning retrotransposon expression, this was generally low, with only 14/828 elements over- or under-expressed in the hybrid than expected by calculating the mean of the parents. It is concluded that interspecific hybridisation between the two poplar species determine quantitative variation and differential expression of some retrotransposons, with possible consequences for the genetic differentiation of the hybrid.
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