TGFBR2

TGFBR2
  • 文章类型: Retraction of Publication
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  • 文章类型: Journal Article
    这项病例对照研究调查了转化生长因子-β(TGF-β)I型和II型受体(TGFBR1和TGFBR2)基因多态性与中国人群尿道下裂风险的关系。以162例尿道下裂患者为病例组,以165例接受包皮环切术的儿童为对照组。根据从HapMap获得的遗传数据选择TGFBR1和TGFBR2基因中的单核苷酸多态性(SNP)。进行PCR限制性片段长度多态性(PCR-RFLP)以鉴定TGFBR1和TGFBR2基因多态性,并分析基因型分布和等位基因频率。采用Logistic回归分析评估尿道下裂的危险因素。关于TGFBR1rs4743325多态性的基因型和等位基因频率,在病例组和对照组之间没有发现显着差异。然而,病例组TGFBR2rs6785358的基因型和等位基因频率与对照组相比有显著差异。携带TGFBR2rs6785358多态性G等位基因的患者与携带A等位基因的患者相比,尿道下裂的风险更高(P<0.05)。发现TGFBR2rs6785358基因型与异常妊娠和早产显著相关(均P<0.05)。TGFBR2rs6785358GG基因型的频率在患有四种不同病理类型尿道下裂的患者中表现出显着差异。Logistic回归分析显示,早产,异常妊娠,TGFBR2rs6785358是尿道下裂的独立危险因素。我们的研究提供了TGFBR2rs6785358多态性可能与尿道下裂的风险相关的证据。
    This case-control study investigated the association of transforming growth factor-β (TGF-β) receptor type I and II (TGFBR1 and TGFBR2) gene polymorphisms with the risk of hypospadias in a Chinese population. One hundred and sixty two patients suffering from hypospadias were enrolled as case group and 165 children who underwent circumcision were recruited as control group. Single nucleotide polymorphisms (SNPs) in TGFBR1 and TGFBR2 genes were selected on the basis of genetic data obtained from HapMap. PCR-restriction fragment length polymorphism (PCR-RFLP) was performed to identify TGFBR1 and TGFBR2 gene polymorphisms and analyze genotype distribution and allele frequency. Logistic regression analysis was conducted to estimate the risk factors for hypospadias. No significant difference was found concerning the genotype and allele frequencies of TGFBR1 rs4743325 polymorphism between the case and control groups. However, genotype and allele frequencies of TGFBR2 rs6785358 in the case group were significantly different in contrast with those in the control group. Patients carrying the G allele of TGFBR2 rs6785358 polymorphism exhibited a higher risk of hypospadias compared with the patients carrying the A allele (P<0.05). The TGFBR2 rs6785358 genotype was found to be significantly related to abnormal pregnancy and preterm birth (both P<0.05). The frequency of TGFBR2 rs6785358 GG genotype exhibited significant differences amongst patients suffering from four different pathological types of hypospadias. Logistic regression analysis revealed that preterm birth, abnormal pregnancy, and TGFBR2 rs6785358 were the independent risk factors for hypospadias. Our study provides evidence that TGFBR2 rs6785358 polymorphism might be associated with the risk of hypospadias.
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  • 文章类型: Journal Article
    使用全基因组关联研究已经发现单核苷酸多态性与肺功能相关。然而,肺功能是一个复杂的性状,除了单个基因外,还可能受到多个基因-基因相互作用的影响。我们的目标是建立一个细胞网络,通过结合SNP水平和使用Framingham心脏研究的纵向肺功能数据的网络分析来探索肺功能与基因型之间的关系。我们分析了来自后代队列的2,698名基因型参与者,他们平均每人进行了3.35次肺活量测定,平均长度为13年。1秒内重复用力呼气量(FEV1)和FEV1与用力肺活量(FVC)之比被用作结果。使用线性混合模型分析肺功能与等位基因之间的关联,方法是考虑同一受试者随时间的重复测量之间的相关性和家庭内相关性。使用dmGWAS进行网络分析,并使用来自第三代队列的数据进行验证。分析确定SMAD3,TGFBR2,CD44,CTGF,VCAN,CTNNB1,SCGB1A1,PDE4D,NRG1、EPHB1和LYN是肺功能的贡献者。这些基因中的大多数是新的,以前仅使用SNP水平分析未发现。这些新基因涉及转化生长因子β(TGFB)-SMAD途径,Wnt/β-catenin通路,等。因此,结合使用纵向肺功能数据的SNP水平和网络分析是识别风险基因的有用替代策略。
    Single nucleotide polymorphisms have been found to be associated with pulmonary function using genome-wide association studies. However, lung function is a complex trait that is likely to be influenced by multiple gene-gene interactions besides individual genes. Our goal is to build a cellular network to explore the relationship between pulmonary function and genotypes by combining SNP level and network analyses using longitudinal lung function data from the Framingham Heart Study. We analyzed 2,698 genotyped participants from the Offspring cohort that had an average of 3.35 spirometry measurements per person for a mean length of 13 years. Repeated forced expiratory volume in one second (FEV1 ) and the ratio of FEV1 to forced vital capacity (FVC) were used as outcomes. Data were analyzed using linear-mixed models for the association between lung function and alleles by accounting for the correlation among repeated measures over time within the same subject and within-family correlation. Network analyses were performed using dmGWAS and validated with data from the Third Generation cohort. Analyses identified SMAD3, TGFBR2, CD44, CTGF, VCAN, CTNNB1, SCGB1A1, PDE4D, NRG1, EPHB1, and LYN as contributors to pulmonary function. Most of these genes were novel that were not found previously using solely SNP-level analysis. These novel genes are involving the transforming growth factor beta (TGFB)-SMAD pathway, Wnt/beta-catenin pathway, etc. Therefore, combining SNP-level and network analyses using longitudinal lung function data is a useful alternative strategy to identify risk genes.
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  • 文章类型: Journal Article
    The purpose of this study was to assess the frequency, severity, and clinical associations of dural ectasia (DE) in Loeys-Dietz syndrome (LDS). Database analysis of three German metropolitan regions identified 30 patients with LDS and TGFBR1 mutation in 6 and a TGFBR2 mutation in 24 individuals (17 men; mean age: 31 ± 19 years), as well as 60 age and sex-matched control patients with Marfan syndrome carrying a FBN1 mutation. DE was present in 22 patients with LDS (73%), and it related to skeletal score points (p = 0.008), non-skeletal score points (p < 0.001), and to the presence of ≥7 systemic score points (p = 0.010). Similarly, the severity of DE was related to body height (p = 0.010) and non-skeletal score points (p = 0.004). Frequency (p = 0.131) and severity of DE (p = 0.567) was similar in LDS and Marfan syndrome. DE is a manifestation of LDS that occurs with similar frequency and severity as in Marfan syndrome. Severity of DE may serve as a marker of the overall connective tissue disease severity. LDS may be considered in patients with DE.
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