Structural biology

结构生物学
  • 文章类型: News
    暂无摘要。
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    目的:第3工作组的目的是探讨材料和抗再吸收药物相关因素对植入牙科临床和生物学结果及并发症的影响。重点关注的问题是(a)钛(合金)以外的植入物材料,解决了(b)经粘膜基台材料和(c)影响骨代谢的药物。
    方法:三个系统综述构成了第3组讨论的基础。根据系统评价结果,通过小组共识制定共识声明和临床建议。还传达了患者的观点和对未来研究的建议。然后根据全体会议的要求进行进一步讨论和修改后,提出并接受了这些建议。
    结果:氧化锆是钛的有效替代品,可用作植入物和透粘膜组件的材料,允许软组织和硬组织与临床结果整合-通过植入物存活来识别,边缘骨质流失和种植体周围探查深度-与胫骨相似,最长为5年。然而,氧化锆植入物的大多数证据是基于限制适应症范围的1件式植入物。此外,根据专家意见,在美学区,氧化锆透粘膜成分可能是首选。在接受低剂量双膦酸盐治疗的患者中,早期植入物失败率没有增加,而对长期影响的研究仍然很少。尽管尚未得到充分解决,低剂量denosumab可以预期类似的结果.当考虑在接受低剂量ARD治疗的患者中放置植入物时,不建议休药期。然而,特定的治疗窗口,应考虑累积剂量和给药时间。必须获得种植体周围的支持性护理,以防止种植体周围炎相关的药物相关的颌骨坏死(MRONJ)或种植体相关的后遗症(IRS)。在接受低剂量抗吸收药物(ARD)治疗的患者中,与植入物放置相关的并发症风险很高,在这一特定人群中的植入程序应在综合的多学科中心严格处理。最后,在低或高剂量ARD之前,不应移除健康的牙科植入物。
    结论:在选定的适应症中,氧化锆植入物可以替代钛植入物。然而,目前的证据仍然有限,特别是2件植入物的设计。低剂量ARD的给药对早期植入结果没有任何负面影响,但建议谨慎随访和支持治疗,以预防MRONJ和IRS植入。必须在综合的多学科中心严格考虑大剂量患者的植入物放置。
    OBJECTIVE: The aim of Working Group 3 was to address the influence of both material- and anti-resorptive drug- related factors on clinical and biological outcomes and complications in implant dentistry. Focused questions were addressed on (a) implant materials other than titanium (alloy)s, (b) transmucosal abutment materials and (c) medications affecting bone metabolism were addressed.
    METHODS: Three systematic reviews formed the basis for discussion in Group 3. Consensus statements and clinical recommendations were formulated by group consensus based on the findings of the systematic reviews. Patient perspectives and recommendations for future research were also conveyed. These were then presented and accepted following further discussion and modifications as required by the plenary.
    RESULTS: Zirconia is a valid alternative to titanium as material for implant and transmucosal components, allowing soft and hard tissue integration with clinical outcomes-identified by implant survival, marginal bone loss and peri-implant probing depths-up to 5-years comparable to titatnium. However, most of the evidence for zirconia implants is based on 1-piece implants limiting the indication range. Furthermore, based on expert opinion, zirconia transmucosal components might be preferred in the esthetic zone. In patients receiving low-dose bisphosphonate therapy, the rate of early implant failure is not increased, while the long-term effects remain poorly studied. Although it has not been sufficiently addressed, similar outcomes can be expected with low-dose denosumab. A drug holiday is not recommended when considering implant placement in patients treated with low-dose ARD. However, the specific therapeutic window, the cumulative dose and the administration time should be considered. Access to peri-implant supportive care is mandatory to prevent peri-implantitis-related medication-related osteonecrosis of the jaw (MRONJ) or implant-related sequestra (IRS). In patients receiving low-dose anti-resorptive drugs (ARD) therapy, the risk of complications related to implant placement is high, and implant procedures in this specific population should be strictly treated in a comprehensive multidisciplinary center. Finally, healthy dental implants should not be removed before low or high-dose ARD.
    CONCLUSIONS: Zirconia implants can be an alternative to titanium implants in selected indications. However, the current state of evidence remains limited, especially for 2-piece implant designs. Administration of low-dose ARD did not show any negative impact on early implant outcomes, but careful follow-up and supportive care is recommended in order to prevent peri-implant MRONJ and IRS. Implant placement in high-dose patients must be strictly considered in a comprehensive multidisciplinary center.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

    求助全文

  • 文章类型: Journal Article
    Transcription initiation starts with unwinding of promoter DNA by RNA polymerase (RNAP) to form a catalytically competent RNAP-promoter complex (RPo). Despite extensive study, the mechanism of promoter unwinding has remained unclear, in part due to the transient nature of intermediates on path to RPo. Here, using single-molecule unwinding-induced fluorescence enhancement to monitor promoter unwinding, and single-molecule fluorescence resonance energy transfer to monitor RNAP clamp conformation, we analyse RPo formation at a consensus bacterial core promoter. We find that the RNAP clamp is closed during promoter binding, remains closed during promoter unwinding, and then closes further, locking the unwound DNA in the RNAP active-centre cleft. Our work defines a new, \'bind-unwind-load-and-lock\', model for the series of conformational changes occurring during promoter unwinding at a consensus bacterial promoter and provides the tools needed to examine the process in other organisms and at other promoters.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Journal Article
    人类兴奋性氨基酸转运蛋白(EAAT)吸收大脑中的神经递质谷氨酸,对维持兴奋性神经传递至关重要。我们对EAATs分子机制的理解受到了纯化蛋白质样品缺乏稳定性的阻碍。这里,我们提出了基于一致诱变的方法,以获得与野生型转运蛋白共享〜95%氨基酸同一性的热稳定EAAT1变体,并保持原生折叠和功能。EAAT1的结构分析和使用与质谱连接的氢-氘交换的共识设计表明,亚单位间界面速率下的小而高度合作的解折叠事件限制了它们的热变性,而运输域在展开途径的后期展开。我们的发现提供了人类谷氨酸转运蛋白动力学稳定性的结构见解,并介绍了用于生物物理分析的延长人膜蛋白寿命的一般方法。
    Human excitatory amino acid transporters (EAATs) take up the neurotransmitter glutamate in the brain and are essential to maintain excitatory neurotransmission. Our understanding of the EAATs\' molecular mechanisms has been hampered by the lack of stability of purified protein samples for biophysical analyses. Here, we present approaches based on consensus mutagenesis to obtain thermostable EAAT1 variants that share up to ~95% amino acid identity with the wild type transporters, and remain natively folded and functional. Structural analyses of EAAT1 and the consensus designs using hydrogen-deuterium exchange linked to mass spectrometry show that small and highly cooperative unfolding events at the inter-subunit interface rate-limit their thermal denaturation, while the transport domain unfolds at a later stage in the unfolding pathway. Our findings provide structural insights into the kinetic stability of human glutamate transporters, and introduce general approaches to extend the lifetime of human membrane proteins for biophysical analyses.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Pubmed)

  • 文章类型: Comparative Study
    合理地改造蛋白质的热稳定性会产生在苛刻的工业应用中起作用的酶和受体。几种基于序列的方法可以产生嗜温蛋白的热稳定变体。为了深入了解蛋白质变得更稳定的机制,我们使用结构和动态分析来比较两种流行的方法,祖先序列重建(ASR)和共识方法,用于产生热不稳定的延伸因子(EF-Tu)的热稳定变体。我们介绍了祖先和共识EF-Tus的晶体结构,伴随着分子动力学模拟,旨在探索用于增强热稳定性的策略。所有蛋白质都采用类似于现有EF-Tus的晶体结构,揭示方法之间的平均结构没有差异。分子动力学表明,ASR生成的序列保留了类似于现有的动态特性,来自Thermusaquaticus的热稳定EF-Tu,而一致EF-Tu动力学不同于基于进化的序列。这项工作突出了ASR在工程热稳定性方面的优势,同时保留了多域蛋白质中的自然运动。
    Rationally engineering thermostability in proteins would create enzymes and receptors that function under harsh industrial applications. Several sequence-based approaches can generate thermostable variants of mesophilic proteins. To gain insight into the mechanisms by which proteins become more stable, we use structural and dynamic analyses to compare two popular approaches, ancestral sequence reconstruction (ASR) and the consensus method, used to generate thermostable variants of Elongation Factor Thermo-unstable (EF-Tu). We present crystal structures of ancestral and consensus EF-Tus, accompanied by molecular dynamics simulations aimed at probing the strategies employed to enhance thermostability. All proteins adopt crystal structures similar to extant EF-Tus, revealing no difference in average structure between the methods. Molecular dynamics reveals that ASR-generated sequences retain dynamic properties similar to extant, thermostable EF-Tu from Thermus aquaticus, while consensus EF-Tu dynamics differ from evolution-based sequences. This work highlights the advantage of ASR for engineering thermostability while preserving natural motions in multidomain proteins.
    导出

    更多引用

    收藏

    翻译标题摘要

    我要上传

       PDF(Sci-hub)

       PDF(Pubmed)

公众号