Self-supervised learning

自监督学习
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    文章类型: Journal Article
    尽管人类视觉理解世界结构的能力在感知世界和做出适当的决定中起着至关重要的作用。人类的感知不仅依赖于视觉,而且融合了来自声学的信息,口头,和视觉刺激。一个活跃的研究领域一直围绕着设计一个有效的框架,该框架可以适应多种模式,并理想地提高现有任务的性能。虽然许多框架已经证明在像ImageNet这样的自然数据集上是有效的,在生物医学领域进行了数量有限的研究。在这项工作中,我们通过利用丰富的资源,将自然数据的可用框架扩展到生物医学数据,非结构化多模态数据可作为放射学图像和报告。我们试图回答这个问题,“对于多模态学习,使用两种学习策略进行自我监督学习和联合学习,哪一个最能改善下游胸片分类任务的视觉表示?\"我们的实验表明,在具有1%和10%标记数据的有限标记数据设置中,多模态和自监督模型的联合学习优于自监督学习,与多模态学习相当。此外,我们发现,多模态学习在分布外的数据集上通常更健壮。该代码可在线公开获得。
    Although human\'s ability to visually understand the structure of the World plays a crucial role in perceiving the World and making appropriate decisions, human perception does not solely rely on vision but amalgamates the information from acoustic, verbal, and visual stimuli. An active area of research has been revolving around designing an efficient framework that adapts to multiple modalities and ideally improves the performance of existing tasks. While numerous frameworks have proved effective on natural datasets like ImageNet, a limited number of studies have been carried out in the biomedical domain. In this work, we extend the available frameworks for natural data to biomedical data by leveraging the abundant, unstructured multi-modal data available as radiology images and reports. We attempt to answer the question, \"For multi-modal learning, self-supervised learning and joint learning using both learning strategies, which one improves the visual representation for downstream chest radiographs classification tasks the most?\". Our experiments indicated that in limited labeled data settings with 1% and 10% labeled data, the joint learning with multi-modal and self-supervised models outperforms self-supervised learning and is at par with multi-modal learning. Additionally, we found that multi-modal learning is generally more robust on out-of-distribution datasets. The code is publicly available online.
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  • 文章类型: Journal Article
    成像在制药行业中通常用作表征方法,包括用于量化固体和液体制剂中的亚可见颗粒。提取颗粒大小以外的信息,例如对形态亚群进行分类,需要某种类型的图像分析方法。对粒子进行分类的建议方法基于预先确定的形态特征或使用卷积神经网络的监督训练来学习与地面实况标签相关的图像表示。由高度复杂的形态引起的并发症,不可预见的课程,以及耗时的地面真相标签准备工作,是这些方法面临的一些挑战。在这项工作中,我们评估了自监督对比学习方法在研究治疗解决方案中的粒子图像中的应用。与有监督的培训不同,这种方法不需要地面实况标签,并且通过比较粒子图像及其增强来学习表示。该方法为形态学属性评估提供了一种快速且易于实现的粗筛选工具。此外,我们的分析表明,在数据集相对平衡的情况下,图像数据集的小子集足以训练能够提取有用图像表示的卷积神经网络编码器。这也表明,通常观察到的粒子类蛋白质溶液中的预填充注射器出现在编码器的嵌入空间的分离簇,促进执行任务,如训练弱监督分类器或识别新亚群的存在。
    Imaging is commonly used as a characterization method in the pharmaceuticals industry, including for quantifying subvisible particles in solid and liquid formulations. Extracting information beyond particle size, such as classifying morphological subpopulations, requires some type of image analysis method. Suggested methods to classify particles have been based on pre-determined morphological features or use supervised training of convolutional neural networks to learn image representations in relation to ground truth labels. Complications arising from highly complex morphologies, unforeseen classes, and time-consuming preparation of ground truth labels, are some of the challenges faced by these methods. In this work, we evaluate the application of a self-supervised contrastive learning method in studying particle images from therapeutic solutions. Unlike with supervised training, this approach does not require ground truth labels and representations are learned by comparing particle images and their augmentations. This method provides a fast and easily implementable tool of coarse screening for morphological attribute assessment. Furthermore, our analysis shows that in cases with relatively balanced datasets, a small subset of an image dataset is sufficient to train a convolutional neural network encoder capable of extracting useful image representations. It is also demonstrated that particle classes typically observed in protein solutions administered by pre-filled syringes emerge as separated clusters in the encoder\'s embedding space, facilitating performing tasks such as training weakly-supervised classifiers or identifying the presence of new subpopulations.
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