REACTIVITY

反应性
  • 文章类型: Journal Article
    为研究我国工业企业挥发性有机物(VOCs)排放特征,选取运城市6个典型化工行业为研究对象,包括现代煤化工(MCC),制药行业(PM),农药工业(PE),焦化工业(CO)和有机化工(OC)。对91种VOCs的化学成分进行了定量分析。结果表明,化工行业VOCs的排放浓度为1.16~155.59mg/m3。烷烃是MCC的主要排放成分(62.0%),PE(55.1%),和OC(58.5%)。烯烃(46.5%)是PM的重要组分,其次是烷烃(23.8%)和含氧挥发性有机化合物(OVOCs)(21.2%)。卤化碳(8.6%-71.1%),OVOCs(9.7%-37.6%)和烷烃(11.2%-27.0%)是CO的特征成分。OFP的最大贡献者是烯烃(0.6%-81.7%),其次是烷烃(9.3%-45.9%),最低的是炔烃(0%-0.5%)。芳烃(66.9%-85.4%)是SOA生成的最大贡献组件,其次是烷烃(2.6%-28.5%),最低的是烯烃(0%-4.1%)。乙烯和BTEX是各种化学工业中的关键活性物种。人体健康风险评估显示,长期暴露在化学工业区空气中的工人在工作期间有很高的癌症和非癌症风险,BTEX和二氯甲烷是最大的贡献者。
    To study the volatile organic compounds (VOCs) emission characteristics of industrial enterprises in China, 6 typical chemical industries in Yuncheng City were selected as research objects, including the modern coal chemical industry (MCC), pharmaceutical industry (PM), pesticide industry (PE), coking industry (CO) and organic chemical industry (OC). The chemical composition of 91 VOCs was quantitatively analyzed. The results showed that the emission concentration of VOCs in the chemical industry ranged from 1.16 to 155.59 mg/m3. Alkanes were the main emission components of MCC (62.0%), PE (55.1%), and OC (58.5%). Alkenes (46.5%) were important components of PM, followed by alkanes (23.8%) and oxygenated volatile organic compounds (OVOCs) (21.2%). Halocarbons (8.6%-71.1%), OVOCs (9.7%-37.6%) and alkanes (11.2%-27.0%) were characteristic components of CO. The largest contributor to OFP was alkenes (0.6%-81.7%), followed by alkanes (9.3%-45.9%), and the lowest one was alkyne (0%-0.5%). Aromatics (66.9%-85.4%) were the largest contributing components to SOA generation, followed by alkanes (2.6%-28.5%), and the lowest one was alkenes (0%-4.1%). Ethylene and BTEX were the key active species in various chemical industries. The human health risk assessment showed workers long-term exposed to the air in the chemical industrial zone had a high cancer and non-cancer risk during work, and BTEX and dichloromethane were the largest contributors.
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  • 文章类型: Journal Article
    背景:结构,电子,在这项研究中,从理论上研究了VerdoocridoneA(VerA)和B(VerB)的非线性光学性质。结果表明,VerA和B具有良好的电子性能,可作为新材料用于NLO应用。根据它们的最大吸收波长,VerA(λmax=313nm)可以生产维生素D,而VerB(λmax=319.55nm)可以帮助皮肤色素沉着。
    方法:所有计算均在DFT/B3LYP-D3/6-311G(d,p)使用高斯16软件包的理论水平。使用TD-DFT方法在CAM-B3LYP结合6-311(d,P)基础设置。此外,通过基于密度(SMD)方法的溶剂化模型研究了水和苯相中的溶剂效应。
    BACKGROUND: The structural, electronic, and nonlinear optical properties of Verdoocridone A (Ver A) and B (Ver B) are examined theoretically in this study. The results showed that Ver A and B exhibit good electronic properties and can be used as new materials in NLO applications. According to their maximum absorption wavelength, Ver A (λmax = 313 nm) enables production of vitamin D, while Ver B (λmax = 319.55 nm) can help skin pigmentation.
    METHODS: All calculations were performed at the DFT/B3LYP-D3/6-311 + G(d,p) level of theory using the Gaussian 16 software package. Excited states were simulated using the TD-DFT method at the CAM-B3LYP combined with 6-311 + (d,p) basis set. Also, the solvent effect was studied in water and benzene phases by the solvation model based on density (SMD) method.
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  • 文章类型: Journal Article
    背景:这项工作分析了异构化效应和溶剂对稳定性的贡献,电子激励,反应性,和白藜芦醇分子的非线性光学性质(NLO)在密度泛函理论的形式。研究结果表明,溶剂极化对白藜芦醇溶剂化有显著影响。电子能和自由能(E和G)表明反式是最稳定的构象体。该系统被分类为强亲核试剂。然而,对福井函数和Mulliken电荷的分析表明,顺反异构作用共同影响碳原子和氢原子的反应性指数。结果还表明溶剂与溶剂化变色和NLO响应有关。顺式和反式构象异构体都表现出强烈的π-π*激发,当溶剂的极性增加时,这些激发会发生可见的增色变化。一旦吸收光谱通过Oudar和Chemla关系连接到第一超极化(β),当环境极性降低时,白藜芦醇的增色是二次谐波产生下降的原因。CAM-B3LYPDFT结果表明白藜芦醇对于NLO应用是有趣的。根据溶剂的选择,尿素的50倍(β=0.34×10-34esu),这是一个标准的NLO材料。
    方法:使用密度泛函理论(DFT)和混合交换相关函数(CAM-B3LYP)和Pople基集函数,获得了真空中白藜芦醇顺式和反式异构体的优化几何形状,具体为6-311++G(d,P).使用具有相同水平的QM计算的可极化连续体模型(PCM),包括了溶剂对两种异构体几何形状的影响。进行振动分析以确认所有优化的几何形状对应于最小能量。各种电子特性,包括偶极矩,分子轨道,过渡能源,偶极子极化率,和全局反应性参数,基于顺序QM/MM方法,使用连续和离散溶剂化模型进行计算。所有QM计算均使用高斯09程序进行,并且使用DICE程序进行MC模拟。使用Multiwfn代码进行所有NLO分析。
    BACKGROUND: This work analyzes the isomerization effects and solvent contributions to the stability, electronic excitations, reactivity, and non-linear optical properties (NLO) of resveratrol molecules within the formalism of the Density Functional Theory. The findings suggest that resveratrol solvatochromism is significantly influenced by solvent polarization. The electronic and free energies (E and G) indicate that trans is the most stable conformer. The system is classified as a strong nucleophile. However, the analysis of the Fukui functions and the Mulliken charges indicate that cis-trans isomerization jointly affects the reactive indices of the carbon and hydrogen atoms. The results also suggest that solvent is relevant to solvatochromism and the NLO response. Both cis and trans conformers present strong π - π ∗ excitations that undergo a visible hypsochromic change when the polarity of the solvent increases. Once the absorption spectra are connected to the first hyperpolarization ( β ) by the Oudar and Chemla relation, the hypsochromism of resveratrol is the reason for the drop in the generation of the second harmonic when the ambient polarity decreases. The CAM-B3LYP DFT results suggest that resveratrol is interesting for NLO applications. Depending on the choice of solvent, values ∼ 50 times those observed for urea ( β = 0.34 × 10 - 34 esu), which is a standard NLO material.
    METHODS: The optimized geometries of cis and trans isomers of resveratrol in vacuum were obtained using Density Functional Theory (DFT) with the hybrid exchange-correlation function (CAM-B3LYP) and Pople basis set functions, specifically 6-311++G(d,p). The solvent effect on the geometries of both isomers was included using the polarizable continuum model (PCM) with the same level of QM calculation. Vibrational analysis was conducted to confirm that all optimized geometries correspond to the minimum energy. Various electronic properties, including dipole moments, molecular orbitals, transition energy, dipole polarizabilities, and global reactivity parameters, were calculated using both continuum and discrete solvation models based on the sequential QM/MM methodology. All QM calculations were performed with the Gaussian 09 program and the MC simulations with the DICE program. All NLO analysis was carried out using the Multiwfn code.
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  • 文章类型: Journal Article
    碳低价氧化物的电子结构,C3O2,最近被描述为OC→C-CO,在中心碳原子上有两个孤对电子,因此称为“Carbones”。尽管它具有线性几何形状,当用两个质子分析其反应性时,出现了两个孤对子的存在。然而,尚未注意其与氢化物离子的交替反应性。在这里,详细的量子化学计算预测碳低价氧化物也可以具有显著的氢化物离子亲和力。该反应性与低氧化碳的σ0π2卡宾特征一致。这项研究还表明,这种σ0π2卡宾特征在碳二膦中也很普遍,C(PH3)2。迄今为止,在“Carbone”化学中尚未探索这种结合情况。
    Electronic structure of carbon suboxide, C3O2, has been recently described as OC→C←CO having two lone pairs at the central carbon atom, thereby called as \"Carbones\". Although it has a linear geometry, the presence of two lone pairs comes to fore when its reactivity is analyzed with two protons. However, no attention had been paid on its alternating reactivity with hydride ions. Herein, detailed quantum chemical calculations predict that carbon suboxide can also have significant hydride ion affinity. This reactivity is in tune with σ0π2 carbene character of carbon suboxide. This study also shows that such a σ0π2 carbene character is also prevalent in carbodiphosphorane, C(PH3)2. This bonding situation has been hitherto unexplored in \"Carbone\" chemistry.
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  • 文章类型: Journal Article
    背景:在本文中,我们采用了最近的主张,在Kohn-Sham分子轨道上使用费米-狄拉克型种群方案,以适应与热化电极相互作用的情况。这可以得出一个基本的非线性方程,该方程将电极的化学势与转移到所研究系统的电荷量联系起来,因此允许量化的倾向,电荷转移(亲)。该方法适用于大量常见的亲电体和亲核体,显示出与更多标准亲性描述符的良好关系。通过这种方法也重新审视了化学硬度。
    方法:使用高斯16软件包在理论的M062X/aug-cc-pvtz水平下进行所有计算。然后通过Python3专用程序(依靠SciPy软件包中的fsolve数值求解器)进行数据分析,使用高斯输出文件,并作为补充材料提供。
    BACKGROUND: In this article, we adapt a recent proposition to use a Fermi-Dirac-type population scheme on Kohn-Sham molecular orbitals to the case of an interaction with a thermalised electrode. This allows to derive a fundamental non-linear equation linking the chemical potential of the electrode and the amount of charge transferred to the system under study, hence allows to quantify the propensity to charge transfer (philicity). This methodology is applied to a large set of common electrophiles and nucleophiles, showing decent relation with more standard philicity descriptors. Chemical hardness is also revisited by this approach.
    METHODS: All calculations were performed using the Gaussian 16 software package at the M062X/aug-cc-pvtz level of theory. Data analysis was then performed through a Python3 dedicated program (relying on the fsolve numerical solver from the SciPy package), using Gaussian output files, and available as supplementary material.
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  • 文章类型: Journal Article
    磺基转移酶(SULTs)是主要的II期代谢酶类别,对FDA批准的药物的II期代谢贡献约20%。忽略SULT介导的代谢的潜力会导致药物-药物相互作用的强大潜力,经常导致后期药物发现失败或FDA标签上的黑盒警告。现有模型仅使用可访问性描述符和机器学习(ML)方法来进行SULT的磺化类别和站点(SOS)预测。在这项研究中,各种可达性,反应性,并开发了混合模型和算法来进行准确的底物和SOS预测。与文献模型不同,脂族或芳族羟基(R/Ar-O-H)的反应性参数,对于SOS预测,债券解离能量(BDE)给出了真实阳性率(TPR)=0.84的准确模型。我们提供了机械论的见解来解释这些在文献中没有认识到的新发现。可达性参数,例如Chemgauss4评分(CGS)和分子量(MW)CGS/MW的比率以及与辅因子的距离(Dis)对于类别预测至关重要,并显示TPR=0.72。基质的BDE含量一直较低,Dis,和CGS/MW比非底物。混合模型对于SOS预测也是可以接受的。使用最好的模型,算法在类别预测中给出了可接受的性能:TPR=0.62,假阳性率(FPR)=0.24,平衡精度(BA)=0.69,SOS预测:TPR=0.98,FPR=0.60,BA=0.69。添加了基于规则的方法来提高预测性能,改进了算法TPR,FPR,和BA。对于最佳算法,使用药物样化合物的外部数据集的验证给出类别预测:TPR=0.67,FPR=0.00,和SOS预测:TPR=0.80和FPR=0.44。与标准ML模型的比较还表明,我们的算法对外部数据集的分类显示出更高的预测性能。总的来说,这些模型和算法(SOS预测器)为SULT介导的II期代谢提供了准确的底物类别和位点(SOS)预测,对学术界和工业界的药物发现界将是有价值的.SOS预测器可通过GitHub链接免费用于学术/非营利研究。
    Sulphotransferases (SULTs) are a major phase II metabolic enzyme class contributing ~20 % to the Phase II metabolism of FDA-approved drugs. Ignoring the potential for SULT-mediated metabolism leaves a strong potential for drug-drug interactions, often causing late-stage drug discovery failures or black-boxed warnings on FDA labels. The existing models use only accessibility descriptors and machine learning (ML) methods for class and site of sulfonation (SOS) predictions for SULT. In this study, a variety of accessibility, reactivity, and hybrid models and algorithms have been developed to make accurate substrate and SOS predictions. Unlike the literature models, reactivity parameters for the aliphatic or aromatic hydroxyl groups (R/Ar-O-H), the Bond Dissociation Energy (BDE) gave accurate models with a True Positive Rate (TPR)=0.84 for SOS predictions. We offer mechanistic insights to explain these novel findings that are not recognized in the literature. The accessibility parameters like the ratio of Chemgauss4 Score (CGS) and Molecular Weight (MW) CGS/MW and distance from cofactor (Dis) were essential for class predictions and showed TPR=0.72. Substrates consistently had lower BDE, Dis, and CGS/MW than non-substrates. Hybrid models also performed acceptablely for SOS predictions. Using the best models, Algorithms gave an acceptable performance in class prediction: TPR=0.62, False Positive Rate (FPR)=0.24, Balanced accuracy (BA)=0.69, and SOS prediction: TPR=0.98, FPR=0.60, and BA=0.69. A rule-based method was added to improve the predictive performance, which improved the algorithm TPR, FPR, and BA. Validation using an external dataset of drug-like compounds gave class prediction: TPR=0.67, FPR=0.00, and SOS prediction: TPR=0.80 and FPR=0.44 for the best Algorithm. Comparisons with standard ML models also show that our algorithm shows higher predictive performance for classification on external datasets. Overall, these models and algorithms (SOS predictor) give accurate substrate class and site (SOS) predictions for SULT-mediated Phase II metabolism and will be valuable to the drug discovery community in academia and industry. The SOS predictor is freely available for academic/non-profit research via the GitHub link.
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  • 文章类型: Journal Article
    皮肤致敏是安全性评估的关键终点,尤其是化妆品和个人护理产品。皮肤致敏的不良结果途径和驱动诱导人皮肤致敏的化学和生物事件现在已经很好地理解。已经开发了几种非动物测试方法来通过测量化学敏化剂对这些关键事件的影响来预测敏化剂潜力。在这项工作中,我们专注于关键事件1(分子启动步骤),其基于皮肤致敏剂与皮肤中的内源性蛋白质和/或肽之间的共价加合物的形成。存在三种经经济合作与发展组织批准的化学内测定法-(1)直接肽反应性测定法(DPRA),(2)氨基酸衍生物反应性测定(ADRA),和(3)动力学直接肽反应性测定(kDPRA),以定量用测试化学品孵育后的肽/氨基酸衍生物消耗。然而,由于硫醇基团的二聚化,基于半胱氨酸的肽/氨基酸衍生物的过高估计的消耗在这样的测定中是已知的。在目前的工作中,我们报道了来自ADRA测定的N-(2-[1-萘基]乙酰基)-L-半胱氨酸(NAC)二聚体的合成和结构确认,以允许同时测定(a)通过定量NAC单体的肽耗竭和(b)通过定量NAC二聚体的肽二聚化,从而消除高估.我们提供了三种化学物质的案例研究,以证明这种方法的重要性。因此,这种同时测定提供了一个更明智的观点的肽反应的化学品,以更好地识别皮肤致敏剂。
    Skin sensitization is a key endpoint for safety assessment, especially for cosmetics and personal care products. The adverse outcome pathway for skin sensitization and the chemical and biological events driving the induction of human skin sensitization are now well understood. Several non-animal test methods have been developed to predict sensitizer potential by measuring the impact of chemical sensitizers on these key events. In this work, we have focused on Key Event 1 (the molecular initiating step), which is based on formation of a covalent adduct between skin sensitizers and endogenous proteins and/or peptides in the skin. There exists three in-chemico assays approved by the Organization for Economic Co-operation and Development-(1) Direct Peptide Reactivity Assay (DPRA), (2) Amino Acid Derivative Reactivity Assay (ADRA), and (3) Kinetic Direct Peptide Reactivity Assay (kDPRA) to quantify peptide/amino acid derivative depletion after incubation with test chemicals. However, overestimated depletion of the cysteine-based peptide/amino acid derivatives is known in such assays because of the dimerization of the thiol group. In this present work, we report the synthesis and structural confirmation of the dimer of N-(2-[1-naphthyl]acetyl)-L-cysteine (NAC) from the ADRA assay to allow simultaneous determination of (a) peptide depletion by quantifying NAC monomer and (b) peptide dimerization by quantifying NAC dimer thereby eliminating the overestimation. We present a case study with three chemicals to demonstrate the importance of this approach. Thus, this simultaneous assay gives a more informed view of the peptide reactivity of chemicals to better identify skin sensitizers.
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  • 文章类型: Journal Article
    已知反应性星形胶质细胞在几种神经退行性疾病中对神经元产生有害影响。然而,我们对星形胶质细胞如何促进神经毒性的理解仍然不完整,尤其是在人类系统中。在这项研究中,我们利用人多能干细胞(hPSC)模型来研究反应性如何改变星形胶质细胞功能和介导神经变性.hPSC来源的星形胶质细胞被诱导为反应表型,在这一点上,他们表现出肥大的概况和增加的补体C3表达。功能上,反应性星形胶质细胞显示细胞内钙减少,吞噬能力升高,和减少对血脑屏障的贡献。随后,反应性星形胶质细胞与多种神经元细胞类型的共培养促进了形态和功能改变。此外,当在来自患者特异性hPSC的星形胶质细胞中诱导反应性时(青光眼,老年痴呆症,和肌萎缩侧索硬化症),反应状态加剧了星形细胞疾病相关表型.这些结果表明反应性星形胶质细胞如何调节神经变性,大大有助于我们理解反应性星形胶质细胞在神经退行性疾病中的作用。
    Reactive astrocytes are known to exert detrimental effects upon neurons in several neurodegenerative diseases, yet our understanding of how astrocytes promote neurotoxicity remains incomplete, especially in human systems. In this study, we leveraged human pluripotent stem cell (hPSC) models to examine how reactivity alters astrocyte function and mediates neurodegeneration. hPSC-derived astrocytes were induced to a reactive phenotype, at which point they exhibited a hypertrophic profile and increased complement C3 expression. Functionally, reactive astrocytes displayed decreased intracellular calcium, elevated phagocytic capacity, and decreased contribution to the blood-brain barrier. Subsequently, co-culture of reactive astrocytes with a variety of neuronal cell types promoted morphological and functional alterations. Furthermore, when reactivity was induced in astrocytes from patient-specific hPSCs (glaucoma, Alzheimer\'s disease, and amyotrophic lateral sclerosis), the reactive state exacerbated astrocytic disease-associated phenotypes. These results demonstrate how reactive astrocytes modulate neurodegeneration, significantly contributing to our understanding of a role for reactive astrocytes in neurodegenerative diseases.
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  • 文章类型: Journal Article
    锰配合物表现出丰富的氧化还原化学,通常伴随着氧化还原过程中的结构重组,通常伴随着配体解离或缔合。推拉配体2,6-二胍基吡啶(dgpy)将锰稳定在氧化态II,+III,和配合物[Mn(dgpy)2]n(n=2-4)中的IV,凝聚相中的配位球没有变化[Heinze等人。,无机化学,2022,61,14616]。在凝聚阶段,锰(IV)络合物是非常强的氧化剂。在目前的工作中,我们研究了MnIV络合物及其反离子(PF6-)加合物在气相中的稳定性和氧化还原活性,使用两个改进的3DPaul离子阱质谱仪。[Mnx(dgpy)2(PF6)y]n(x=II,III,IV,对于三种氧化态MnIV,可以观察到y=0-3,n=1-3),MnIII,和MnII,其中一个观察到的络合物还含有还原的dgpy配体。MnII物种在碰撞诱导解离和UV/vis光解离实验中显示出最高的相对稳定性。在一种或多种抗衡离子的存在下观察到最低的稳定性,这与较低的总电荷n+相关。气相UV/vis光谱显示出与凝聚相光谱相似的特征,仅在相对谱带强度上有所不同。强氧化性MnIV络合物在气相中与三乙胺(NEt3)反应生成MnIII,而MnIII物种对NEt3几乎没有反应性。
    Manganese complexes exhibit a rich redox chemistry, usually accompanied by structural reorganization during the redox processes often followed by ligand dissociation or association. The push-pull ligand 2,6-diguanidylpyridine (dgpy) stabilizes manganese in the oxidation states +II, +III, and + IV in the complexes [Mn(dgpy)2]n+ (n = 2-4) without change in the coordination sphere in the condensed phase [Heinze et al., Inorganic Chemistry, 2022, 61, 14616]. In the condensed phase, the manganese(IV) complex is a very strong oxidant. In the present work, we investigate the stability and redox activity of the MnIV complex and its counterion (PF6-) adducts in the gas phase, using two modified 3D Paul ion trap mass spectrometers. Six different cationic species of the type [Mnx(dgpy)2(PF6)y]n+ (x = II, III, IV, y = 0-3, n = 1-3) could be observed for the three oxidation states MnIV, MnIII, and MnII, of which one observed complex also contains a reduced dgpy ligand. MnII species showed the highest relative stability in collision induced dissociation and UV/vis photo dissociation experiments. The lowest stability is observed in the presence of one or more counterions, which correlates to a lower total charge n+. Gas phase UV/vis spectra show similar features as the condensed phase spectra only differing in relative band intensities. The strongly oxidizing MnIV complex reacts with triethylamine (NEt3) in the gas phase to give MnIII, while MnIII species show little reactivity toward NEt3.
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  • 文章类型: Journal Article
    最近在构建单线态氧(1O2)为主的催化氧化系统方面做出了巨大的努力,以选择性地去除废水中的有机污染物。过氧化物作为化学来源。然而,1O2在去除污染物中的相关性仍然模棱两可,需要阐明。在这项研究中,我们严格排除了各种过氧单硫酸盐(PMS)活化系统中1O2在污染物降解中的重要作用。多个实验结果表明,CuO催化PMS活化,MnO2,Fe掺杂g-C3N4(Fe-CN),或N掺杂石墨不主要遵循1O2途径。更重要的是,1O2的反应性在文献中被大大高估了,鉴于其降解一系列杂环污染物和具有吸电子基团的芳族化合物的能力较差。此外,水的强烈物理淬火作用,再加上1O2的氧化能力低,会显著降低过氧化物的利用效率,这在微污染物的降解中尤为明显。我们认为,这项研究有望结束与1O2在污染物去除中的相关性有关的长期争议。
    Significant efforts have recently been exerted toward construction of singlet oxygen (1O2)-dominated catalytic oxidation systems for selective removal of organic contaminants from wastewater, with peroxides serving as the chemical source. However, the relevance of 1O2 in the removal of pollutants remains ambiguous and requires elucidation. In this study, we scrupulously exclude the significant role of 1O2 in contaminant degradation in various peroxymonosulfate (PMS) activation systems. Multiple experimental results indicate that the activation of PMS catalyzed by CuO, MnO2, Fe-doped g-C3N4 (Fe-CN), or N-doped graphite does not predominantly follow the 1O2 pathway. More importantly, the reactivity of 1O2 is remarkably overestimated in the literature, given its inferior capacity in degradation of a range of heterocyclic contaminants and aromatic compounds possessing electron-withdrawing groups. In addition, the strong physical quenching effect of water, coupled with the low oxidizing ability of 1O2, would notably reduce the utilization efficiency of peroxide, which is particularly apparent in the degradation of micropollutants. We reckon that this study is expected to end the long-running dispute associated with the relevance of 1O2 in pollutant removal.
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