Pathologists

病理学家
  • 文章类型: English Abstract
    乳腺癌需要多学科管理。病理学家和医生使用组织病理学申请表和病理报告进行沟通。有一些最低标准,双方都应该尊重。
    我们评估了组织病理学要求表和病理学报告在贝宁南部女性乳腺癌标本管理中的充分性。
    这是一个横截面,描述性和分析性研究,回顾性数据收集超过57个月(4年9个月)。根据法国高级自治机构(HAS)的建议,评估了组织病理学申请表和病理报告的充分性。采用SPSS软件进行数据处理。我们用Chi2测试检查了频率,显著性水平设置为5%。
    31.3%的组织病理学要求表符合HAS建议。92.7%的病例以叙事方式呈现病理报告,68.8%的病例符合最低标准。血管栓塞的存在,激素受体和HER2状态均仅在29.2%的报告中报告.
    组织病理学申请单和病理报告草案不符合所要求的最低标准。这种情况主要可以通过医生和病理学家之间不存在共识以及缺乏免疫组织化学来解释。编辑全国公民投票和使用天气报告会带来更好的结果。
    UNASSIGNED: Breast cancer requires multidisciplinary management. Pathologists and physicians communicate using the histopathology request form and the pathology report. There are some minimal criteria that both should respect.
    UNASSIGNED: We assessed the adequacy of histopathology request forms and pathology reports in the management of female breast cancer specimens in Southern Benin.
    UNASSIGNED: This was a cross-sectional, descriptive and analytical study, with retrospective data collection over 57 months (4 years and 9 months). The adequacy of the histopathology request forms and pathology reports was assessed on the basis of the recommendations of the Haute Autorité de Santé (HAS) of France. Data processing was done using SPSS software. We checked frequencies with the Chi2 test, with a significance level set at 5%.
    UNASSIGNED: 31.3% of histopathology request forms complied with HAS recommendations. Pathology reports were presented in a narrative way in 92.7% of cases and 68.8% met the minimal criteria. The presence of vascular embolus, of hormone receptors and the HER2 status were all reported in only 29.2% of the reports.
    UNASSIGNED: The draft of histopathology request forms and pathology reports did not comply to the required minimal criteria. This situation could mainly be explained by the inexistence of consensus between physicians and pathologists and by the lack of immunohistochemistry. Editing national referentials and using synoptic reports would give better results.
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  • 文章类型: Journal Article
    本文介绍了用于病理报告的健康七级快速医疗保健互操作性资源(FHIR)配置文件的开发,该配置文件与整个幻灯片图像和临床数据集成在一起,以创建病理学研究数据库。报告模板旨在收集结构化报告,使病理学家能够根据检查表选择结构化术语,允许用于描述肿瘤特征的术语的标准化。我们收集并分析了190份自由文本格式的非小细胞肺癌病理报告,然后通过将逐项词汇映射到FHIR观察资源来构建它们,使用国际标准术语,如国际疾病分类,LOINC,SNOMEDCT由此产生的FHIR配置文件作为实施指南发布,其中包括25个基本数据元素的配置文件,值集,和结构化定义,用于整合与病理报告相关的临床数据和病理图像。这些配置文件可以在系统之间交换结构化数据,并有助于将病理数据集成到电子健康记录中,这可以提高癌症患者的护理质量。
    This paper describes the development of Health Level Seven Fast Healthcare Interoperability Resource (FHIR) profiles for pathology reports integrated with whole slide images and clinical data to create a pathology research database. A report template was designed to collect structured reports, enabling pathologists to select structured terms based on a checklist, allowing for the standardization of terms used to describe tumor features. We gathered and analyzed 190 non-small-cell lung cancer pathology reports in free text format, which were then structured by mapping the itemized vocabulary to FHIR observation resources, using international standard terminologies, such as the International Classification of Diseases, LOINC, and SNOMED CT. The resulting FHIR profiles were published as an implementation guide, which includes 25 profiles for essential data elements, value sets, and structured definitions for integrating clinical data and pathology images associated with the pathology report. These profiles enable the exchange of structured data between systems and facilitate the integration of pathology data into electronic health records, which can improve the quality of care for patients with cancer.
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  • 文章类型: Case Reports
    在检查枪伤造成的死亡时,重要的是描述弹丸造成的伤口路径。法医病理学家必须识别所有入口和出口伤口,并说明所有弹丸。偶尔,对于皮肤缺陷是否代表入口伤口产生混淆,出口伤口,或者其他类型的伤口.在这里,我们提出了描述“子弹道皮肤缺陷”作为沿人体内弹丸路径产生的浅表皮肤缺陷的正式描述。具体来说,我们将“子弹道皮肤缺损”定义为弹丸以相对切向的方式在皮肤下作为体内伤口路径的一部分而产生的部分或全部厚度的皮肤缺损。这有点类似于传统的擦伤或表面切向伤口,其中在体外行进的射弹从上方切向撞击皮肤,不进入身体。然而,弹丸已经在体内传播,带有子弹道皮肤缺陷,从下面而不是从上面切向地破坏皮肤,没有离开身体。尽管这些缺陷不是枪伤的常见表现,它们当然并不罕见。有了这个案例系列,我们建议这种缺陷可以称为“子弹道皮肤缺陷”。“可以替代“子弹道皮肤缺陷”的替代语言包括“子弹道皮肤伤口”或“子弹道皮肤缺陷”。\"
    In examining deaths resulting from gunshot wounds, it is important to describe the wound pathway created by the projectile. Forensic pathologists must identify all entrance and exit wounds and account for all projectiles. Occasionally, confusion arises as to whether a skin defect represents an entrance wound or not, an exit wound, or some other type of wound. Herein, we propose the descriptor \"bullet track skin defect\" as a formal description for a superficial skin defect created along the pathway of a projectile within the body. Specifically, we define the \"bullet track skin defect\" as a partial- or full-thickness skin defect produced by a projectile traveling beneath the skin in a relatively tangential fashion as part of a wound pathway within the body. It is somewhat analogous to a traditional graze or superficial tangential wound, wherein the projectile traveling outside the body strikes the skin tangentially from above, without entering the body. However, the projectile is already traveling within the body with the bullet track skin defect, disrupting the skin tangentially from below rather than from above, without exiting the body. Although these defects are not a common presentation of gunshot wounds, they are certainly not rare. With this case series, we suggest that such defects may be referred to as \"bullet track skin defects.\" Alternative language that can substitute for \"bullet track skin defects\" includes \"bullet track skin wounds\" or \"bullet track cutaneous defects.\"
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  • 文章类型: Journal Article
    本期刊上的一项先前研究,“临床医生来自火星,病理学家来自金星,“表明,临床医生可以错误地解释病理报告高达30%的时间。在注意到炎症性肠病(IBD)的报告异质性后,我们推测,标准化的天气报告可以提高胃肠病学家的理解。
    研究天气表对胃肠病学家对IBD病理报告的理解的影响。
    我们招募了胃肠病学研究员和教师参与这项研究。所有参与者均获得6份病理报告,并询问是否存在以下情况:活动性炎症,慢性炎症,IBD,和发育不良。参与者还被要求对他们的信心进行评分。经过6周的冲洗期,相同的问卷与天气报告一起分发。我们进行了配对t检验,以比较干预前和干预后反应之间的平均准确性和置信度得分。
    共有39名医生参加:9名研究员和30名教职员工。干预后平均准确度得分较高(0.81对0.86,P<.001)。干预后平均信心也更高,但这并无统计学意义(3.91对3.98,P=.24).
    干预后准确性评分的提高证实了临床医生对天气表的理解提高了。天气报告可以提供一种在IBD背景下将诊断信息传达给临床医生的标准化方式,以及潜在的其他炎症。
    UNASSIGNED: A prior study in this journal, \"Clinicians Are from Mars and Pathologists Are From Venus,\" demonstrated that clinicians can erroneously interpret pathology reports up to 30% of the time. After noticing reporting heterogeneity in the setting of inflammatory bowel disease (IBD), we speculated that a standardized synoptic report could improve gastroenterologist comprehension.
    UNASSIGNED: To investigate the effect of a synoptic table on gastroenterologist comprehension of IBD pathology reports.
    UNASSIGNED: We recruited gastroenterology fellows and faculty to participate in this study. All participants were given 6 pathology reports and asked if the following were present: active inflammation, chronic inflammation, IBD, and dysplasia. Participants were also asked to rate their confidence. After a 6-week washout period, the same questionnaire was distributed with a synoptic report. We performed paired t-tests to compare the mean accuracy and confidence scores between the preintervention and postintervention responses.
    UNASSIGNED: A total of 39 physicians participated: 9 fellows and 30 faculty. Mean accuracy scores were higher after the intervention (0.81 versus 0.86; P < .001). Mean confidence was also higher after intervention, but this was not statistically significant (3.91 versus 3.98; P = .24).
    UNASSIGNED: The improvement in accuracy scores after intervention confirms that clinician comprehension improved with the synoptic table. A synoptic report may provide a standardized way of communicating diagnostic information to clinicians in the setting of IBD and potentially other inflammatory conditions.
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  • 文章类型: Journal Article
    肾细胞癌(RCC)恶性肿瘤的预后严重依赖于组织学亚型的准确确定,目前涉及组织学载玻片的光学显微镜视觉分析,特别是考虑肿瘤结构和细胞学。因此,RCC亚型是一个耗时且繁琐的过程,有时需要专家审查,对诊断有很大的影响,肾癌肿瘤的预后和治疗.在这项研究中,我们调查了91例患者的自动RCC亚型分类,诊断为透明细胞RCC,乳头状RCC,发色细胞RCC,或者肾嗜酸细胞瘤,通过基于深度学习的方法。我们展示了几种最先进的卷积神经网络(CNN)的分类性能如何在不同的RCC亚型中完美。因此,我们引入了一种新的分类模型,利用了有监督的深度学习模型(特别是CNN)和病理学家的专业知识,催生了一种混合方法,我们称之为ExpertDeepTree(ExpertDT)。我们的发现证明了ExpertDT在RCC亚型任务中的卓越能力,关于传统的CNN,并建议将一些基于专家的知识引入深度学习模型可能是复杂分类案例的有价值的解决方案。
    The prognosis of renal cell carcinoma (RCC) malignant neoplasms deeply relies on an accurate determination of the histological subtype, which currently involves the light microscopy visual analysis of histological slides, considering notably tumor architecture and cytology. RCC subtyping is therefore a time-consuming and tedious process, sometimes requiring expert review, with great impact on diagnosis, prognosis and treatment of RCC neoplasms. In this study, we investigate the automatic RCC subtyping classification of 91 patients, diagnosed with clear cell RCC, papillary RCC, chromophobe RCC, or renal oncocytoma, through deep learning based methodologies. We show how the classification performance of several state-of-the-art Convolutional Neural Networks (CNNs) are perfectible among the different RCC subtypes. Thus, we introduce a new classification model leveraging a combination of supervised deep learning models (specifically CNNs) and pathologist\'s expertise, giving birth to a hybrid approach that we termed ExpertDeepTree (ExpertDT). Our findings prove ExpertDT\'s superior capability in the RCC subtyping task, with respect to traditional CNNs, and suggest that introducing some expert-based knowledge into deep learning models may be a valuable solution for complex classification cases.
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  • 文章类型: Journal Article
    背景大型语言模型(LLM),例如ChatGPT-3.5,GoogleBard,和微软Bing,在各种自然语言处理(NLP)任务中显示出很有前途的能力。然而,它们在解决特定领域问题方面的性能和准确性,特别是在血液学领域,没有被广泛调查。目的本研究旨在探索LLM的能力,即,ChatGPT-3.5,谷歌吟游诗人,和微软Bing(精确),在解决血液学相关病例并比较他们的表现。方法这是一项在生理学和病理学系进行的横断面研究,全印度医学科学研究所,Deoghar,Jharkhand,印度。我们策划了一组50例血液学病例,涵盖了一系列主题和复杂性。数据集包括与血液疾病相关的查询,恶性血液病,实验室测试参数,计算,和治疗选择。每个案例和相关问题都准备了一组正确的答案进行比较。我们利用了ChatGPT-3.5,GoogleBard实验,和MicrosoftBing(精确)用于问答任务。答案由两名生理学家和一名病理学家检查。他们以1到5的等级评定答案。通过弗里德曼测试和邓恩的事后测试比较了三种模型的平均得分。通过单样本中位数测试,将LLM的表现与2.5的中位数进行了比较,因为策划问题的课程具有50%的及格分数。结果三种LLM的得分差异有统计学意义(p值<0.0001),ChatGPT得分最高(3.15±1.19)。其次是Bard(2.23±1.17)和Bing(1.98±1.01)。ChatGPT评分明显高于50%(p值=0.0004),巴德的得分接近50%(p值=0.38),Bing的评分明显低于及格评分(p值=0.0015)。结论LLM在解决血液学中的病例样本方面存在显着差异。ChatGPT表现出最高分,其次是GoogleBard和MicrosoftBing。观察到的性能趋势表明,ChatGPT在医学领域具有广阔的潜力。然而,没有一个模型能够准确回答所有问题。语言模型的进一步研究和优化可以为医疗保健和医学教育应用提供有价值的贡献。
    Background Large language models (LLMs), such as ChatGPT-3.5, Google Bard, and Microsoft Bing, have shown promising capabilities in various natural language processing (NLP) tasks. However, their performance and accuracy in solving domain-specific questions, particularly in the field of hematology, have not been extensively investigated. Objective This study aimed to explore the capability of LLMs, namely, ChatGPT-3.5, Google Bard, and Microsoft Bing (Precise), in solving hematology-related cases and comparing their performance. Methods This was a cross-sectional study conducted in the Department of Physiology and Pathology, All India Institute of Medical Sciences, Deoghar, Jharkhand, India. We curated a set of 50 cases on hematology covering a range of topics and complexities. The dataset included queries related to blood disorders, hematologic malignancies, laboratory test parameters, calculations, and treatment options. Each case and related question was prepared with a set of correct answers to compare with. We utilized ChatGPT-3.5, Google Bard Experiment, and Microsoft Bing (Precise) for question-answering tasks. The answers were checked by two physiologists and one pathologist. They rated the answers on a rating scale from one to five. The average score of the three models was compared by Friedman\'s test with Dunn\'s post-hoc test. The performance of the LLMs was compared with a median of 2.5 by a one-sample median test as the curriculum from which the questions were curated has a 50% pass grade. Results The scores among the three LLMs were significantly different (p-value < 0.0001) with the highest score by ChatGPT (3.15±1.19), followed by Bard (2.23±1.17) and Bing (1.98±1.01). The score of ChatGPT was significantly higher than 50% (p-value = 0.0004), Bard\'s score was close to 50% (p-value = 0.38), and Bing\'s score was significantly lower than the pass score (p-value = 0.0015). Conclusion The LLMs reveal significant differences in solving case vignettes in hematology. ChatGPT exhibited the highest score, followed by Google Bard and Microsoft Bing. The observed performance trends suggest that ChatGPT holds promising potential in the medical domain. However, none of the models was capable of answering all questions accurately. Further research and optimization of language models can offer valuable contributions to healthcare and medical education applications.
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  • 文章类型: Journal Article
    胎盘检查,经常由普通外科病理学家执行,在了解患者结局和解释导致早产(PTB)的潜在机制方面发挥着重要作用.这项对更大研究复发性PTB的二次分析旨在比较2009年至2018年在单一机构检查的早产胎盘中普通外科病理学家(GSP)和围产期病理学家(PP)之间的诊断。病理诊断分为4类(急性炎症[AI],慢性炎症,胎儿血管灌注不良,母体血管灌注不良)基于GSP的原始报告和单一PP的第二次审查。总共包括331个胎盘,代表由17个GSP最终确定的胎盘。所有4个胎盘诊断类别的患病率均较高,通过GSP确定的胎盘中,近一半(49.2%)没有诊断结果.AI的一致性最高,κ=0.50(弱一致性)。然而,母体血管灌注不良(κ=0.063)没有一致性,慢性炎症(κ=0.0026),和胎儿血管灌注不良(κ=-0.018)。浆细胞的慢性基底蜕皮炎的假阴性率最高(GSP漏诊107例)。绒毛梗塞的假阳性率最高(在28/41[68%]病例中被高估),其中大多数“梗塞”代表绒毛间血栓。总之,在评估除AI以外的胎盘病理时,GSP和PP之间没有一致性,甚至对AI来说也是微弱的协议。这些发现呼吁采取行动,实施教育工作和结构/组织变化,以提高胎盘病理报告的一致性。
    Placental examination, frequently performed by general surgical pathologists, plays an important role in understanding patient outcomes and explaining the underlying mechanisms leading to preterm birth (PTB). This secondary analysis of a larger study recurrent PTB aimed to compare diagnoses between general surgical pathologists (GSP) and a perinatal pathologist (PP) in preterm placentas examined between 2009 and 2018 at a single institution. Pathology diagnoses were coded into 4 categories (acute inflammation [AI], chronic inflammation, fetal vascular malperfusion, maternal vascular malperfusion) based on original reports for the GSP and second review by the single PP. A total of 331 placentas were included, representing placentas finalized by 17 GSPs. The prevalence of all 4 placental diagnostic categories was higher for the PP, and nearly half (49.2%) of placentas finalized by GSP had no diagnostic findings. Agreement was highest for AI at κ=0.50 (weak agreement). However, there was no agreement for maternal vascular malperfusion (κ=0.063), chronic inflammation (κ=0.0026), and fetal vascular malperfusion (κ = -0.018). Chronic basal deciduitis with plasma cells had the highest false-negative rate (missed in 107 cases by GSP). Villous infarction had the highest false-positive rate (overcalled in 28/41 [68%] cases) with the majority of the \"infarcts\" representing intervillous thrombi. In conclusion, there is no agreement between GSP and PP when assessing placental pathology other than AI, and weak agreement even for AI. These findings are a call to action to implement educational efforts and structural/organizational changes to improve consistency of placental pathology reporting.
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  • 文章类型: Journal Article
    PD-L1在癌症模型中的免疫组织化学(IHC)表达被用作免疫疗法反应的预测性生物标志物。我们旨在评估使用3种不同的组织处理器在IHC表达PD-L1抗体克隆:22C3和SP142中的影响。在宏观镜室选择了三种不同的样本(n=73):39子宫平滑肌瘤,17胎盘和17腭扁桃体。从每个样品中收集三个碎片,并用特定的颜色染色,这些颜色代表它们在不同的组织处理器中的单独处理(A,B或C)。在嵌入期间,具有不同处理的3个片段被整合在同一盒中,用于切片3个载玻片/每个:苏木精-伊红,22C3PDL1IHC染色和SP142PD-L1IHC染色,在数字环境下由2位病理学家盲目观察。除了一组3个片段之外的所有片段都被认为足以用于观察,即使在存在与处理问题相关的伪影的情况下,对于处理器C记录为高达50.7%。背景非特异性染色的发生和假阳性结果的存在似乎与PD-L1克隆或组织处理的类型无关。22C3PD-L1比SP142PD-L1更经常被认为适合评估,由于缺乏典型的表达模式,29.2%的WSI(组织处理器C后)被认为不足以进行观察。同样,扁桃体和胎盘标本中通过C处理的片段(PD-L1克隆)的PD-L1染色强度显着降低,并通过A(两个克隆)与B处理的克隆进行比较。这项研究表明,需要标准化病理学中的组织处理,以应对精确医学定量的不断增长的需求以及计算病理学使用所需的高质量材料的生产。
    The immunohistochemical (IHC) expression of PD-L1 in cancer models is used as a predictive biomarker of response to immunotherapy. We aimed to evaluate the impact of the usage of 3 different tissue processors in the IHC expression of PD-L1 antibody clones: 22C3 and SP142. Three different topographies of samples (n = 73) were selected at the macroscopy room: 39 uterine leiomyomas, 17 placentas and 17 palatine tonsils. Three fragments were collected from each sample and were inked with a specific color that represented their separate processing in a different tissue processor (A, B or C). During embedding, the 3 fragments with distinct processing were ensemble in the same cassette for sectioning of 3 slides/each: hematoxylin-eosin, 22C3 PDL1 IHC staining and SP142 PD-L1 IHC staining, that were blindly observed by 2 pathologists under digital environment. All but one set of 3 fragments were considered adequate for observation even in the presence of artifacts associated with processing issues that were recorded as high as 50.7 % for processor C. The occurrence of background non-specific staining and the presence of false positive results appear to be unrelated with the PD-L1 clone or the type of tissue processing. 22C3 PD-L1 was more frequently considered adequate for evaluation than SP142 PD-L1 that, in 29.2 % of WSIs (after tissue processor C) were considered not adequate for observation due to lack of the typical pattern of expression. Similarly, the intensity of PD-L1 staining was significantly decreased in fragments processed by C (both PD-L1 clones) in tonsil and placenta specimens, and by A (both clones) in comparison with those processed by B. This study demonstrates the need to standardize the tissue processing in pathology to cope with the growing needs of precision medicine quantifications and the production of high-quality material necessary for computational pathology usage.
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  • 文章类型: Journal Article
    内分泌肿瘤代表越来越广泛的疾病。内分泌肿瘤的范围从偶然发现到潜在致命的恶性肿瘤。在本文中,我们涵盖病理学在临床病理学解释中的影响,遗传,和支持这些肿瘤的影像学特征。我们强调了多学科相互作用在构建合理的诊断和有效的治疗计划中的关键作用,并强调了组织病理学输入在决策中的作用。在这种情况下,标准化病理报告和第二意见内分泌病理回顾代表了相关工具,可改善每种特定情况下内分泌肿瘤患者的整体诊断检查.事实上,尽管可以根据临床表现和生化/影像学检查正确识别相关比例的病例,如果未正确考虑所有难题,则有一部分病例表现出非典型发现,这可能导致基于错误病理诊断的不适当诊断和治疗计划。病理学家有责任在外科手术之前和期间积极指导临床医生,以防止不必要的干预。在所有内分泌病理学领域,病理学家必须了解组织保存的复杂性以及分析的敏感性和特异性,以确保诊断材料的最佳质量和解释。最后,病理学家是肿瘤组织生物吸收的中心角色,这是肿瘤学中一个不断扩大的领域,应该在遵守严格的道德和方法标准的同时加以推广。
    Endocrine neoplasia represents an increasingly broad spectrum of disorders. Endocrine neoplasms range from incidental findings to potentially lethal malignancies. In this paper, we cover the impact of pathology in the interpretation of the clinic-pathological, genetic, and radiographic features underpinning these neoplasms. We highlight the critical role of multidisciplinary interactions in structuring a rational diagnostic and efficient therapeutic plan and emphasize the role of histopathological input in decision-making. In this context, standardized pathology reporting and second opinion endocrine pathology review represent relevant tools to improve the overall diagnostic workup of patients affected by endocrine tumors in every specific scenario. In fact, although a relevant proportion of cases may be correctly identified based on clinical presentation and biochemical/imaging investigations, a subset of cases presents with atypical findings that may lead to an inappropriate diagnosis and treatment plan based on a wrong pathological diagnosis if all pieces of the puzzle are not correctly considered. Pathologists have a responsibility to actively guide clinicians before and during surgical procedures to prevent unnecessary interventions. In all areas of endocrine pathology, pathologists must understand the complexity of tissue preservation and assay sensitivities and specificities to ensure the optimal quality and interpretation of diagnostic material. Finally, pathologists are central actors in tumor tissue biobanking, which is an expanding field in oncology that should be promoted while adhering to strict ethical and methodological standards.
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  • 文章类型: Case Reports
    In the early morning a 28-year-old man was found lying on the tracks of a railway station with head injuries and fractures of the cervical spine resulting in permanent quadriplegia. He was in a club about 1 km away until about 2 h earlier and did not have any recollection of what could have happened. Was he the victim of an assault, did he fall down or was he hit by a passing train? The solution to this \"mystery\" came from a forensic evaluation that included the forensic branches of pathology, chemistry, merceology and genetics as well as the scene evaluation. Through these different steps, the role of a railway collision in determining the injuries was ascertained and a possible dynamic was postulated. The presented case is an expression of the importance of the different forensic disciplines and the difficulties the forensic pathologist encounters when analysing such peculiar and rare cases.
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