Novel species

新物种
  • 文章类型: Case Reports
    背景:Chromobacterium是十四个物种的属,具有有效的公开名称,最常见于世界各地热带和亚热带地区的土壤和水域。该属最知名的物种,C.紫罗兰,偶尔会引起临床相关的感染;软组织感染伴败血症和致命结局的病例已有描述.
    方法:这里,我们提供了一例来自瑞典的79岁男性软组织感染和败血症的临床病例报告.病原体被鉴定为一株色杆菌,但不是紫罗兰。患者接受克林霉素和环丙沙星治疗,恢复良好。
    结论:本病例报告显示了色杆菌作为免疫功能正常患者感染因子的潜力。这也表明了一个新物种的存在。
    BACKGROUND: Chromobacterium is a genus of fourteen species with validly published names, most often found in soil and waters in tropical and subtropical regions around the world. The most well-known species of the genus, C. violaceum, occasionally causes clinically relevant infections; cases of soft tissue infections with septicemia and fatal outcomes have been described.
    METHODS: Here, we present a clinical case report of a 79-year-old man from Sweden with a soft-tissue infection and septicemia. The pathogen was identified as a strain of Chromobacterium species, but not C. violaceum. The patient was treated with clindamycin and ciprofloxacin and recovered well.
    CONCLUSIONS: This case report demonstrates the potential of Chromobacterium species as infectious agents in immunocompetent patients. It also indicates the existence of a novel species.
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  • 文章类型: Journal Article
    从患有手腕和手臂体癣的女性患者的皮肤鳞片中分离出一种新型皮肤癣菌。她的主要危险因素是长期使用皮质类固醇治疗潜在的狼疮自身免疫综合征。病变皮肤鳞屑的显微镜检查显示菌丝与皮肤癣菌感染一致,在所有皮肤鳞片培养物上,一种形态相同的真菌在纯培养物中生长。五个月后,从持续性病变中重复分离同一生物体,证实了该新物种是病原体。显微镜检查显示主要光滑,薄壁大分生孢子,有大量不同形状和大小的单细胞杂散孢子。由于分离物表现出相当大的微观同构性,具有与几个皮肤癣菌属一致的形态特征,对它进行了多基因座系统发育分析,总共使用了六个不同的基因座。所有基因座的序列分析表明,该分离株与Nannizzia内的物种聚集在一起,但根据分析的基因座,与该属的所有已知成员相差2%至13%。分离株对特比萘芬的体外最低抑制浓度很高,这可能解释了为什么感染对这种抗真菌剂的两个口服治疗周期没有反应。有趣的是,从捷克共和国患者的腿部皮肤中分离出的未命名的“微孢子菌sp”的GenBank中的序列在所有共同分析的基因座中显示出超过99%的同一性,表明这种新型生物,我们在这里描述为Nannizziaperplicatasp。11月。,可能并不局限于英国。
    A novel dermatophyte was isolated from skin scales of a female patient presenting with tinea corporis of the wrist and arm. Her principal risk factor was long-term corticosteroid use for underlying Lupus autoimmune syndrome. Microscopic examination of skin scales from lesions revealed hyphae consistent with dermatophyte infection, and a morphologically identical fungus grew in pure culture on all cultures of skin scales. Repeat isolation of the same organism from persistent lesions five months later confirmed the novel species as the causative agent. Microscopic examination revealed predominantly smooth, thin-walled macroconidia, with large numbers of unicellular aleuriospores of varied shapes and sizes. Since the isolate exhibited considerable microscopic pleomorphism, sharing morphological features consistent with several dermatophyte genera, it was subjected to multi-locus phylogenetic analyses employing a total of six different loci. Sequence analyses of all loci revealed that the isolate clustered with species within Nannizzia but diverged from all known members of the genus by 2 to 13% depending on locus analyzed. The isolate exhibited high minimum inhibitory concentrations for terbinafine in vitro, which might explain why the infection had failed to respond to two cycles of oral treatment with this antifungal agent. Interestingly, sequences in GenBank of an unnamed \"Microsporum sp\" isolated from leg skin of a patient in the Czech Republic showed greater than 99% identity across all of the loci analysed in common, indicating that this novel organism, which we describe here as Nannizzia perplicata sp. nov., is likely not restricted to the UK.
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