Mediator Complex

调解员复合体
  • 文章类型: Journal Article
    前列腺癌的进展是由雄激素受体(AR)活性驱动的,这是治疗方法的目标。恩扎鲁胺是一种AR抑制剂,可延长晚期前列腺癌患者的生存期。然而,抗性机制出现并损害其功效。这些机制之一是AR-V7的表达,即组成型活性AR剪接变体。Mediator复合物是一种多亚基蛋白,可在全基因组范围内调节基因表达。MED12和细胞周期蛋白依赖性激酶8(CDK8),或其旁系CDK19是调节前列腺癌细胞增殖的激酶模块的组成部分。在这项研究中,我们调查了MED12和CDK8/19如何影响前列腺癌细胞系中的癌症驱动过程,关注AR活性和恩扎鲁他胺反应。我们抑制了LNCaP中的MED12表达和CDK8/19活性(AR,恩杂鲁胺敏感型),22Rv1(AR-V7+,恩杂鲁胺抗性),和PC3(AR-,恩杂鲁胺不敏感)细胞。在所有细胞系中,MED12和CDK8/19抑制都会降低细胞增殖,和MED12抑制减少各自3D球状体中的增殖。MED12敲低显著抑制c-Myc蛋白表达和信号通路。在22Rv1单元格中,它持续抑制AR反应,前列腺特异性抗原(PSA)分泌,AR靶基因,和AR-V7表达。联合恩扎鲁他胺,MED12抑制在LNCaP和22Rv1细胞中增加降低AR活性。CDK8/19抑制显著降低LNCaP和22Rv1细胞的PSA分泌,当与恩扎鲁他胺合用时,22Rv1细胞的增殖增加减少。我们的研究表明,MED12和CDK8/19调节AR活性,它们的抑制作用可能会调节前列腺癌对恩杂鲁胺的反应。
    Prostate cancer progression is driven by androgen receptor (AR) activity, which is a target for therapeutic approaches. Enzalutamide is an AR inhibitor that prolongs the survival of patients with advanced prostate cancer. However, resistance mechanisms arise and impair its efficacy. One of these mechanisms is the expression of AR-V7, a constitutively active AR splice variant. The Mediator complex is a multi-subunit protein that modulates gene expression on a genome-wide scale. MED12 and cyclin-dependent kinase 8 (CDK8), or its paralog CDK19, are components of the kinase module that regulates the proliferation of prostate cancer cells. In this study, we investigated how MED12 and CDK8/19 influence cancer-driven processes in prostate cancer cell lines, focusing on AR activity and the enzalutamide response. We inhibited MED12 expression and CDK8/19 activity in LNCaP (AR+, enzalutamide-sensitive), 22Rv1 (AR-V7+, enzalutamide-resistant), and PC3 (AR-, enzalutamide-insensitive) cells. Both MED12 and CDK8/19 inhibition reduced cell proliferation in all cell lines, and MED12 inhibition reduced proliferation in the respective 3D spheroids. MED12 knockdown significantly inhibited c-Myc protein expression and signaling pathways. In 22Rv1 cells, it consistently inhibited the AR response, prostate-specific antigen (PSA) secretion, AR target genes, and AR-V7 expression. Combined with enzalutamide, MED12 inhibition additively decreased the AR activity in both LNCaP and 22Rv1 cells. CDK8/19 inhibition significantly decreased PSA secretion in LNCaP and 22Rv1 cells and, when combined with enzalutamide, additively reduced proliferation in 22Rv1 cells. Our study revealed that MED12 and CDK8/19 regulate AR activity and that their inhibition may modulate response to enzalutamide in prostate cancer.
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  • 文章类型: Journal Article
    目的:基因表达的转录调控在心脏发育和功能过程中协调复杂的形态发生和分子事件中起着至关重要的作用。介体复合物是控制真核细胞中基因表达的必需多亚基蛋白复合物。虽然介体亚基(MED)在复合体中整体工作,单个MED组件显示专用功能。MED27,归类为上尾亚基,具有尚未表征的功能。在这项研究中,我们旨在研究MED27在心肌细胞中的生理作用。
    方法:我们生成了Med27floxed鼠标行,进一步用于产生组成型(cKO)和诱导型(icKO)心肌细胞特异性Med27敲除小鼠模型。形态学,在Med27cKO和icKO突变体中进行了组织学分析和心脏生理学研究。通过RNA测序(RNAseq)分析确定转录谱。
    结果:在发育中的小鼠心肌细胞中消融MED27会导致胚胎致死,而其在成人心肌细胞中的缺失导致心力衰竭和死亡。类似于另一个上尾亚基的消融,心肌细胞中的MED30,MED27的缺失导致心肌细胞中大多数MED的蛋白质水平降低。有趣的是,MED30的过表达无法恢复MED27缺陷心肌细胞中Mediator亚基的蛋白质水平,证明MED27在维持介体复合物的完整性和稳定性方面的作用与MED30无关。
    结论:我们的结果揭示了MED27通过维持介体核心的稳定性在心脏发育和功能中的重要作用。
    OBJECTIVE: Transcriptional regulation of gene expression plays a crucial role in orchestrating complex morphogenetic and molecular events during heart development and function. Mediator complex is an essential multi-subunit protein complex that governs gene expression in eukaryotic cells. Although Mediator subunits (MEDs) work integrally in the complex, individual MED component displays specialized functions. MED27, categorized as an Upper Tail subunit, possesses an as-yet-uncharacterized function. In this study, we aimed to investigate the physiological role of MED27 in cardiomyocytes.
    METHODS: we generated a Med27 floxed mouse line, which was further used to generate constitutive (cKO) and inducible (icKO) cardiomyocyte-specific Med27 knockout mouse models. Morphological, histological analysis and cardiac physiological studies were performed in Med27 cKO and icKO mutants. Transcriptional profiles were determined by RNA sequencing (RNAseq) analysis.
    RESULTS: Ablation of MED27 in developing mouse cardiomyocytes results in embryonic lethality, while its deletion in adult cardiomyocytes leads to heart failure and mortality. Similar to the ablation of another Upper Tail subunit, MED30 in cardiomyocytes, deletion of MED27 leads to decreased protein levels of most MEDs in cardiomyocytes. Interestingly, overexpression of MED30 fails to restore the protein levels of Mediator subunits in MED27-deficient cardiomyocytes, demonstrating that the role of MED27 in maintaining the integrity and stability of the Mediator complex is independent of MED30.
    CONCLUSIONS: Our results revealed an essential role of MED27 in cardiac development and function by maintaining the stability of the Mediator core.
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  • 文章类型: Journal Article
    Zhao等人1和Chen等人2的补充研究揭示了MED13中的一个内在无序区域如何控制RNA聚合酶II和CDK8激酶模块与介体的相互排斥结合,打开和关闭介体和转录激活。
    Complementary studies by Zhao et al.1 and Chen et al.2 reveal how an intrinsically disordered region in MED13 controls mutually exclusive binding of RNA Polymerase II and CDK8 kinase module to Mediator, switching Mediator and transcription activation on and off.
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  • 文章类型: Journal Article
    目的:介体复合物亚基12(MED12)是各种类型人类癌症中最常见的突变基因之一。然而,对于MED12在乳腺癌患者中的作用仍缺乏了解.因此,本研究的目的是探讨MED12在乳腺癌中的作用。材料和方法:我们利用UALCAN平台(http://ualcan。路径。uab.edu/)用于分析转录表达,蛋白质表达,和MED12的蛋白质磷酸化数据。我们的研究涉及35名乳腺癌患者。从这些样本中,我们提取了蛋白质和RNA。要获得MED123\'-UTR的序列,我们进行了逆转录-聚合酶链反应和测序.然后,我们使用TargetScan预测MED123'-UTR的miRNA靶标,并通过双荧光素酶测定确认miRNA与MED123'-UTR之间的相互作用。结果:乳腺癌中MED12蛋白水平上调,而mRNA水平没有显示出显著的变化。有趣的是,较高的MED12mRNA水平与较好的预后相关,而MED12蛋白水平升高的患者往往预后较差.此外,通过我们对MED123'-UTR序列的分析,我们发现了乳腺肿瘤特有的C->T变异.我们还鉴定了四个miRNA(miR-204,-211,-450b,和-518a)直接针对MED123\'-UTR。最重要的是,这种C->T变异破坏了MED123'-UTR和miR-450b之间的相互作用,最终导致乳腺癌中MED12的上调。结论:我们的研究揭示了关于MED123'-UTR突变位点的重要发现,该突变位点有助于乳腺癌中MED12的上调。这种突变破坏了特定miRNA和MED12mRNA之间的相互作用,导致MED12表达增加。这些发现对乳腺癌的诊断具有重要意义,因为这个突变位点可以作为有效的生物标志物。
    Objective: Mediator complex subunit 12 (MED12) is among the most frequently mutated genes in various types of human cancers. However, there is still a lack of understanding regarding the role of MED12 in breast cancer patient. Therefore, the aim of this study is to explore the roles of MED12 in breast cancer. Materials and Methods: We utilized the UALCAN platform (http://ualcan.path.uab.edu/) for analyzing the transcriptional expression, protein expression, and protein phosphorylation data of MED12. Our study involved 35 breast cancer patients. From these samples, we extracted proteins and RNA. To obtain the sequence of MED12 3\'-UTR, we performed reverse transcription-polymerase chain reaction and sequencing. We then used TargetScan to predict the miRNA targets of MED12 3\'-UTR and confirmed the interactions between miRNAs and MED12 3\'-UTR through dual luciferase assay. Results: The protein level of MED12 was upregulated in breast cancer, while the mRNA level did not show significant changes. Interestingly, higher levels of MED12 mRNA were associated with better prognosis, whereas patients with increased MED12 protein levels tended to have a poorer prognosis. Furthermore, through our analysis of the MED12 3\'-UTR sequence, we identified a specific C->T variation that was unique to breast tumors. We also identified four miRNAs (miR-204, -211, -450 b, and -518a) that directly target MED12 3\'-UTR. Most important, this C->T variation disrupts the interaction between MED12 3\'-UTR and miR-450b, ultimately leading to the upregulation of MED12 in breast cancer. Conclusion: Our study revealed a significant finding regarding a mutation site in the MED12 3\'-UTR that contributes to the upregulation of MED12 in breast cancer. This mutation disrupts the interactions between specific miRNAs and MED12 mRNA, leading to increased expression of MED12. These findings have important implications for breast cancer diagnosis, as this mutation site can serve as a potent biomarker.
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  • 文章类型: Journal Article
    介体复合物亚基23(MED23)基因编码一种充当尾部模块介体复合物的蛋白质,参与几种细胞活动的多亚基共激活剂。MED23已被证明在肌生成和其他分子机制中具有重要作用。MED23在神经系统中的功能仍不清楚,临床表型也没有彻底描述。使用全外显子组测序来鉴定MED23基因中的新突变。用Illumina阵列进行使用下一代基于测序的拷贝数变异分析的DNA捕获探针。临床,人口统计学,神经影像学,收集患者的电生理数据,同样,我们提取了文献中所有报告病例的数据以比较结果.共筛选了9662篇文章,我们确定了MED23基因的22个主要调控过程,包括对致癌过程的抑制活性。MED23还参与大脑的神经发生和功能。已确定的病例主要表现为智力障碍(87.5%)和发育迟缓(50%)。仅18.75%的患者出现癫痫发作。在少数患者的脑电图(EEG)和延迟的髓鞘形成上报道了缓慢的背景以及尖峰和锐波复合物,薄的call体,磁共振成像(MRI)和脑桥发育不全。MED23基因调节几个过程,其中它的理解促进了患者的巨大治疗潜力。考虑基因和实验室测试至关重要,特别是当遇到潜在的载体时。智力障碍和发育迟缓是最明显的临床体征,在EEG和MRI上具有异质性特征。
    The mediator complex subunit 23 (MED23) gene encodes a protein that acts as a tail module mediator complex, a multi-subunit co-activator involved in several cellular activities. MED23 has been shown to have substantial roles in myogenesis and other molecular mechanisms. The functions of MED23 in the neurological system remain unclear and the clinical phenotype is not thoroughly described. Whole exome sequencing was used to identify a novel mutation in the MED23 gene. DNA capture probes using next-generation sequencing-based copy number variation analysis with Illumina array were performed. The clinical, demographic, neuroimaging, and electrophysiological data of the patients were collected, and similarly, the data of all reported cases in the literature were extracted to compare findings. Screening a total of 9,662 articles, we identified 22 main regulatory processes for the MED23 gene, including suppressive activity for carcinogenic processes. MED23 is also involved in the brain\'s neurogenesis and functions. The identified cases mainly presented with intellectual disability (87.5%) and developmental delay (50%). Seizures were present in only 18.75% of the patients. Slow backgrounds and spike and sharp-wave complexes were reported on the electroencephalogram (EEG) of a few patients and delayed myelination, thin corpus callosum, and pontine hypoplasia on magnetic resonance imaging (MRI). The MED23 gene regulates several processes in which its understanding promotes considerable therapeutic potential for patients. It is crucial to consider genetic and laboratory testing, particularly when encountering potential carriers. Intellectual disability and developmental delay are the most notable clinical signs with heterogeneous features on EEG and MRI.
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  • 文章类型: Journal Article
    不连续转录在进化上是保守的,是基因调控的一个基本特征,转录爆发的确切机制尚未解决。对全转录组爆发的分析集中在顺式调节元件的作用上,但是调节这一过程的其他因素仍然难以捉摸。我们将数学建模应用于单细胞RNA测序数据,以推断在多种条件下全转录组的爆发动力学,以识别可能的分子机制。我们发现介体复合物亚基26(MED26)主要调节频率,MYC调节爆发大小,而粘附蛋白和含溴结构域的蛋白4(BRD4)可以调节两者。尽管这些扰动对RNA水平的影响相当,MED26的急性耗竭对整个基因调控网络产生了最深远的影响,作用于染色质空间结构的下游,不影响TATA盒结合蛋白(TBP)募集。这些结果表明,转录爆发启动的后续步骤是在单细胞中整合基因网络的主要节点。
    Discontinuous transcription is evolutionarily conserved and a fundamental feature of gene regulation; yet, the exact mechanisms underlying transcriptional bursting are unresolved. Analyses of bursting transcriptome-wide have focused on the role of cis-regulatory elements, but other factors that regulate this process remain elusive. We applied mathematical modeling to single-cell RNA sequencing data to infer bursting dynamics transcriptome-wide under multiple conditions to identify possible molecular mechanisms. We found that Mediator complex subunit 26 (MED26) primarily regulates frequency, MYC regulates burst size, while cohesin and Bromodomain-containing protein 4 (BRD4) can modulate both. Despite comparable effects on RNA levels among these perturbations, acute depletion of MED26 had the most profound impact on the entire gene regulatory network, acting downstream of chromatin spatial architecture and without affecting TATA box-binding protein (TBP) recruitment. These results indicate that later steps in the initiation of transcriptional bursts are primary nodes for integrating gene networks in single cells.
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  • 文章类型: Journal Article
    我们描述了一种时间分辨的新生单细胞RNA测序(RNA-seq)方法,该方法可测量基因特异性转录噪声和酿酒酵母中活性基因的分数。大多数基因以近组成型行为表达,而一部分基因显示高mRNA变异,提示转录爆发。转录噪声在辅因子/共激活因子冗余(CR)基因类别中最高(取决于SAGA和TFIID),在含TATA的CR基因中最强。使用这种方法,我们还发现组蛋白基因转录从低水平转换,在M和M/G1期间的低噪声组成模式到S期的激活状态,显示出活性启动子分数的增加和向嘈杂和突发性转录模式的转换。辅因子SAGA和MEDTail的快速消耗表明,这两种因子在刺激CR基因的活性启动子部分中起重要作用。在转录噪声中具有更适度的作用。
    We describe a time-resolved nascent single-cell RNA sequencing (RNA-seq) approach that measures gene-specific transcriptional noise and the fraction of active genes in S. cerevisiae. Most genes are expressed with near-constitutive behavior, while a subset of genes show high mRNA variance suggestive of transcription bursting. Transcriptional noise is highest in the cofactor/coactivator-redundant (CR) gene class (dependent on both SAGA and TFIID) and strongest in TATA-containing CR genes. Using this approach, we also find that histone gene transcription switches from a low-level, low-noise constitutive mode during M and M/G1 to an activated state in S phase that shows both an increase in the fraction of active promoters and a switch to a noisy and bursty transcription mode. Rapid depletion of cofactors SAGA and MED Tail indicates that both factors play an important role in stimulating the fraction of active promoters at CR genes, with a more modest role in transcriptional noise.
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  • 文章类型: Journal Article
    高渗胁迫耐受性对于酿酒酵母从可再生原料生产增值产品至关重要。对其耐受机制的有限理解阻碍了这些微生物细胞工厂的应用。先前的研究表明,Med3在酿酒酵母的高渗应激中起作用。然而,Med3在高渗胁迫耐受中的具体功能尚不清楚.在这项研究中,我们表明,在高渗胁迫下,介质Med3的缺失会损害酿酒酵母的生长。表型分析和酵母双杂交分析显示,Med3与转录因子Stb5相互作用,以调节基因gnd1和ald6的表达,这些基因在高渗胁迫条件下参与NADPH的产生。med3的缺失导致细胞内NADPH含量降低,导致氧化应激增加和高渗胁迫下细胞内活性氧水平升高,从而影响芽的形成。这些发现强调了Med3作为调节剂在高渗应激期间维持酿酒酵母中NADPH生成和氧化还原稳态的重要作用。宿主菌株的高渗胁迫耐受性是工业生产中发酵性能的重大挑战。在这项研究中,我们发现酿酒酵母介质Med3是酵母在高渗条件下生长所必需的。Med3与转录因子Stb5相互作用,以调节高渗胁迫期间NADPH生成系统中涉及的基因的表达。充足的NADPH确保及时去除过量的活性氧并支持这些条件下的芽形成。这项工作强调了Med3作为调节剂在高渗应激期间维持酿酒酵母中NADPH生成和氧化还原稳态的关键作用。
    Hyperosmotic stress tolerance is crucial for Saccharomyces cerevisiae in producing value-added products from renewable feedstock. The limited understanding of its tolerance mechanism has impeded the application of these microbial cell factories. Previous studies have shown that Med3 plays a role in hyperosmotic stress in S. cerevisiae. However, the specific function of Med3 in hyperosmotic stress tolerance remains unclear. In this study, we showed that the deletion of the mediator Med3 impairs S. cerevisiae growth under hyperosmotic stress. Phenotypic analyses and yeast two-hybrid assays revealed that Med3 interacts with the transcription factor Stb5 to regulate the expression of the genes gnd1 and ald6, which are involved in NADPH production under hyperosmotic stress conditions. The deletion of med3 resulted in a decrease in intracellular NADPH content, leading to increased oxidative stress and elevated levels of intracellular reactive oxygen species under hyperosmotic stress, thereby impacting bud formation. These findings highlight the significant role of Med3 as a regulator in maintaining NADPH generation and redox homeostasis in S. cerevisiae during hyperosmotic stress.IMPORTANCEHyperosmotic stress tolerance in the host strain is a significant challenge for fermentation performance in industrial production. In this study, we showed that the S. cerevisiae mediator Med3 is essential for yeast growth under hyperosmotic conditions. Med3 interacts with the transcription factor Stb5 to regulate the expression of genes involved in the NADPH-generation system during hyperosmotic stress. Adequate NADPH ensures the timely removal of excess reactive oxygen species and supports bud formation under these conditions. This work highlights the crucial role of Med3 as a regulator in maintaining NADPH generation and redox homeostasis in S. cerevisiae during hyperosmotic stress.
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  • 文章类型: Journal Article
    介体复合物的蛋白质-蛋白质相互作用(PPI)网络受到非常严格的调节,并取决于不同的发育和环境线索。这里,我们提供了一个交互式平台,用于比较分析来自人类的Mediator亚基,面包酵母酿酒酵母,并在称为MediatorWeb的用户友好的Web界面数据库中建立拟南芥模型。MediatorWeb提供了可视化和分析Mediator子单元的PPI网络的界面。该数据库便于下载中介复杂的非目标和未加权网络,它的子模块,和各个Mediator子单元,以更好地可视化各个Mediator子单元或其子模块的重要性。Further,MediatorWeb提供了Mediator复合物和功能注释的相互作用蛋白质的网络可视化。此功能为了解不同进程中Mediator子单元的功能提供了线索。在其他选项卡中,MediatorWeb提供了对二级和三级结构的快速访问,以及三种模式生物中介体亚基的残基级联系信息。MediatorWeb的另一个有用的功能是基于直系同源分析的互系生物检测,这可以提供线索来理解中介复合体在较少探索的王国中的功能。因此,MediatorWeb及其功能可以帮助用户了解Mediator复合物及其亚基在基因表达转录调控中的作用。
    The protein-protein interaction (PPI) network of the Mediator complex is very tightly regulated and depends on different developmental and environmental cues. Here, we present an interactive platform for comparative analysis of the Mediator subunits from humans, baker\'s yeast Saccharomyces cerevisiae, and model plant Arabidopsis thaliana in a user-friendly web-interface database called MediatorWeb. MediatorWeb provides an interface to visualize and analyze the PPI network of Mediator subunits. The database facilitates downloading the untargeted and unweighted network of Mediator complex, its submodules, and individual Mediator subunits to better visualize the importance of individual Mediator subunits or their submodules. Further, MediatorWeb offers network visualization of the Mediator complex and interacting proteins that are functionally annotated. This feature provides clues to understand functions of Mediator subunits in different processes. In an additional tab, MediatorWeb provides quick access to secondary and tertiary structures, as well as residue-level contact information for Mediator subunits in each of the three model organisms. Another useful feature of MediatorWeb is detection of interologs based on orthologous analyses, which can provide clues to understand the functions of Mediator complex in less explored kingdoms. Thus, MediatorWeb and its features can help the user to understand the role of Mediator complex and its subunits in the transcription regulation of gene expression.
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  • 文章类型: Case Reports
    这是MED13L单倍体功能不全综合征中小儿紧张症综合征的第一份报告。本报告描述了在罕见遗传条件下卡顿多症的诊断和管理方面的独特挑战。该案例还说明了癫痫患者使用电惊厥治疗,癫痫性脑病,或其他癫痫素质和确定维持电惊厥治疗过程的临床难题。
    UNASSIGNED: This is the first report of pediatric catatonia syndrome in MED13L haploinsufficiency syndrome. This report describes unique challenges in diagnosis and management of catatonia in rare genetic conditions. The case also illustrates the use of electroconvulsive therapy in patients with epilepsy, epileptic encephalopathy, or other epileptic diathesis and the clinical conundrum in determining the course of maintenance electroconvulsive therapy.
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