Intraspecific variation

种内变异
  • 文章类型: Journal Article
    来自波兰西南部几个人群的Balaustium代表的分子检查,使用线粒体细胞色素C氧化酶亚基I的序列数据进行,确认了他们与Balaustiummuorum的共同特定隶属关系和身份。在所研究的材料中可能存在不同的物种,通过主成分分析探索度量数据集的结果,初步推断了聚类的发现,由于只发现一种单倍型而被拒绝,在人口内和人口间抽样中。对幼虫的综合性状的洞察,专注于腿部的断乳,揭示了比迄今公认的物种更广泛的变异。与现场收集的幼虫相比,实验室饲养的幼虫的变异更高。人口内和人口间水平与平均字符值的总体偏差,高于迄今为止观察到的物种,投票赞成重新评估采用综合方法歧视Balaustium成员的标准。
    Molecular examination of representatives of Balaustium from several populations in SW Poland, performed using the sequence data from the mitochondrial cytochrome c oxidase subunit I, confirmed their common specific affiliation and identity with Balaustium murorum. The potential presence of distinct species in the studied material, preliminarily inferred from the discovery of clusters as a result of Principal Component Analysis exploring the metric data sets, was rejected due to the finding of only one haplotype, at intra- and inter-population sampling. An insight into meristic traits in larvae, focused on chaetotaxy of legs, revealed wider variation than hitherto recognized for the species. The variation was higher in laboratory-reared larvae compared to field-collected ones. The overall deviations from the mean character values at intra- and interpopulation levels, higher than hitherto observed for the species, vote for the reappraisal of the criteria adopted for discrimination of members of Balaustium with the application of an integrative approach.
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  • 文章类型: Journal Article
    活的有机体适应他们的环境,这种对环境变化的适应性反应受到基因组和表观基因组成分的影响。由于适应支撑着对压力源的容忍度,在评估环境化学品的不利后果时,考虑生物适应性至关重要,比如杀生物剂。Daphnid研究揭示了特定种群或克隆对环境化学物质的敏感性存在差异,以及物种之间。这项研究旨在确定对化学物质的敏感性是否受到种内变异的影响,以及这种敏感性是否取决于水蚤种群的遗传和表观遗传背景。我们使用一种综合方法来评估5-氯-2-甲基-4-异噻唑啉-3-酮和2-甲基-4-异噻唑啉-3-酮(CMIT/MIT)混合物的比较毒性,一种常用的异噻唑啉酮杀生物剂,通过测量死亡率,繁殖,生理特征,全局DNA甲基化,以及物种和菌株水平的蛋白质组表达。结果表明,同种品系之间对CMIT/MIT的敏感性变化(Daphniapulex;DPRvs.DPA菌株)可能超过同类物种之间观察到的(D.麦格纳vs.D.pulexDPR菌株)。在控制条件下,DPR(对CMIT/MIT最敏感的菌株)的特点是体型较大,更高的心率,与对应的DNA甲基化(DPA)相比,全球DNA甲基化水平更高,和蛋白质组谱在两个菌株之间有所不同。特别是,该研究确定了CMIT/MIT对LC20的菌株特异性表观遗传和蛋白质组学反应,证明与观察到的表型差异和对CMIT/MIT的敏感性相关的推定关键蛋白质和生物学途径。某些蛋白质的下调(例如,SAM合成酶,GSTs,血红蛋白,和角质层蛋白)和DNA低甲基化可作为异噻唑啉酮毒性的不良结局途径(AOP)的关键事件(KE)。我们的发现表明,遗传变异和表观遗传修饰都可以导致对化学物质敏感性的种内变异。这种变化应该在化学物质的生态风险评估框架中考虑。我们建议对甲基化基因区域进行进一步分析,并观察跨代效应,以验证遗传和表观遗传因素之间的串扰在表型和蛋白质表达中的作用。数据可用性:蛋白质组数据可在补充材料中获得。
    Living organisms adapt to their environment, and this adaptive response to environmental changes is influenced by both genomic and epigenomic components. As adaptation underpins tolerance to stressors, it is crucial to consider biological adaptation in evaluating the adverse outcomes of environmental chemicals, such as biocides. Daphnid studies have revealed differences in sensitivity to environmental chemicals between conspecific populations or clones, as well as between species. This study aimed to identify whether sensitivity to chemicals is subject to intraspecific variation, and whether this sensitivity depends on the genetic and epigenetic backgrounds of the daphnid population. We used an integrative approach to assess the comparative toxicity of a mixture of 5-chloro-2-methyl-4-isothiazoline-3-one and 2-methyl-4-isothiazolin-3-one (CMIT/MIT), a commonly used isothiazolinone biocide, by measuring mortality, reproduction, physiological traits, global DNA methylation, and proteomic expression at the species and strain levels. The results showed that the variation in sensitivity to CMIT/MIT between conspecific strains (Daphnia pulex; DPR vs. DPA strains) could exceed that observed between congeneric species (D. magna vs. D. pulex DPR strain). Under the control conditions, DPR (the strain most sensitive to CMIT/MIT) was characterized by a larger body size, a higher heart rate, and a higher level of global DNA methylation compared to its counterpart (DPA), and proteome profiles differed between the two strains. Particularly, the study identified strain-specific epigenetic and proteomic responses to LC20 of CMIT/MIT, demonstrating putative critical proteins and biological pathways associated with the observed differences in phenotype and sensitivity to CMIT/MIT. Downregulation of certain proteins (e.g., SAM synthase, GSTs, hemoglobin, and cuticle proteins) and DNA hypomethylation can be proposed as key events (KEs) of adverse outcome pathway (AOP) for isothiazolinone toxicity. Our findings indicate that both genetic variations and epigenetic modifications can lead to intraspecific variation in sensitivity to chemicals, and this variation should be considered in the ecological risk assessment framework for chemical substances. We suggest conducting further analysis on methylated gene regions and observing transgenerational effects to verify the role of crosstalk between genetic and epigenetic factors in phenotypic and protein expressions. DATA AVAILABILITY: Proteomic data is available in supplementary materials.
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  • 文章类型: Journal Article
    一些物种广泛出现的原因,尽管相关物种的地理范围受到限制,但归因于栖息地的专业化或生态位宽度。对于虎耳草属的物种,仅栖息地专业化不能解释观察到的分布差异。我们假设招聘特征(即,发芽,出现,和生存率)可能解释了地理范围的差异,并且早期生命阶段与生存率相关。我们在实验室和普通花园实验中,使用从欧洲阿尔卑斯山的79个种群中收集的种子,研究了13种广泛的和12种窄范围的Saxifraga物种的招募反应。我们发现,在实验室中,与两个分布组的温暖温度相比,寒冷温度导致更高的发芽率。这代表了一般假设的例外,即高山物种需要温暖的发芽线索。在温暖的实验室温度下,广泛的物种比窄范围的物种发芽更好,表明前者对温暖温度的耐受性更大。发芽后,在普通花园中,两个分布组之间的招募性状较低或无效,这表明招募对物种地理范围的影响发生在最早的生命阶段。窄范围物种的平均出现时间显示出比广泛物种更低的变异性。始终如一,对于窄范围物种,种子收集地点之间的年平均温度的种内变化较低,表明家庭地点和出现时间之间的密切关系。出现百分比是唯一广泛物种生存的有力预测指标,强调种子和幼苗功能性状在分布群体之间不同,这需要进一步的研究。我们的结果支持以下观点:早期生命阶段对种群动态至关重要,因此可以影响物种的地理范围。广泛物种对气候条件的更广泛反应可能促进了它们在阿尔卑斯山的传播。我们的研究结果还表明,由于其整体适应寒冷的招募生态位,所有虎耳草物种都面临着气候变暖的巨大威胁。
    The reasons why some species occur widespread, while related species have restricted geographical ranges have been attributed to habitat specialization or ecological niche breadth. For species in the genus Saxifraga, habitat specialization alone cannot explain the distributional differences observed. We hypothesize that recruitment traits (i.e., germination, emergence, and survival) may account for differences in geographical ranges and that early life stages correlate to survival. We studied recruitment responses in 13 widespread and 12 narrow-ranged Saxifraga species in the laboratory and common garden experiments using seeds collected from 79 populations in the European Alps. We found that in the laboratory cold temperature led to higher germination percentages compared with warm temperature for both distribution groups. This represents an exception to the general assumption that alpine species require warm cues for germination. In warm laboratory temperatures, widespread species germinated better than narrow-ranged species, indicating a greater tolerance of warm temperatures for the former. Subsequent to germination, recruitment traits between the two distribution groups were lower or null in the common garden, suggesting that the impact of recruitment on species\' geographical ranges occurs at the earliest life stage. Mean time to emergence of narrow-ranged species showed lower variability than that of widespread species. Consistently, intraspecific variation of mean annual temperatures between seed collection sites was lower for narrow-ranged species, indicating a close relationship between home sites and emergence time. Emergence percentage was a strong predictor of survival only for widespread species, underlining that seed and seedling functional traits differ between distribution groups, which require further research. Our results support the view that early life stages are critical to population dynamics and thus can influence species\' geographical ranges. The wider responses to climatic conditions in widespread species may have facilitated their spread across the Alps. Our results also suggest that all Saxifraga species face a considerable threat from climate warming due to their overall cold-adapted recruitment niche.
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  • 文章类型: Journal Article
    Generally, the species is considered to be the only naturally occurring taxon. However, species recognised and defined using different species delimitation criteria cannot readily be compared, impacting studies of biodiversity through Deep Time. This comparability issue is particularly marked when comparing extant with extinct species, because the only available data for species delimitation in fossils is derived from their preserved morphology, which is generally restricted to osteology in vertebrates. Here, we quantify intraspecific, intrageneric, and intergeneric osteological variability in extant species of lacertid lizards using pairwise dissimilarity scores based on a dataset of 253 discrete osteological characters for 99 specimens referred to 24 species. Variability is always significantly lower intraspecifically than between individuals belonging to distinct species of a single genus, which is in turn significantly lower than intergeneric variability. Average values of intraspecific variability and associated standard deviations are consistent (with few exceptions), with an overall average within a species of 0.208 changes per character scored. Application of the same methods to six extinct lacertid species (represented by 40 fossil specimens) revealed that intraspecific osteological variability is inconsistent, which can at least in part be attributed to different researchers having unequal expectations of the skeletal dissimilarity within species units. Such a divergent interpretation of intraspecific and interspecific variability among extant and extinct species reinforces the incomparability of the species unit. Lacertidae is an example where extant species recognised and defined based on a number of delimitation criteria show comparable and consistent intraspecific osteological variability. Here, as well as in equivalent cases, application of those skeletal dissimilarity values to palaeontological species delimitation potentially provides a way to ameliorate inconsistencies created by the use of morphology to define species.
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  • 文章类型: Journal Article
    Organism shape changes predictably during ontogeny, resulting in specific patterns of ontogenetic allometry. In several plant and animal lineages, among-species variation in the shape of mature organisms mirrors variation along their growth trajectories. Hence, ontogenetic allometry is an important bias in evolution. This bias should be stronger at reduced evolutionary time scales, in which among-trait correlations had less time to evolve. Nevertheless, it was shown that adaptation of organism shape frequently involved departures from the ancestral ontogenetic allometry. Moreover, only a moderate fraction of shape variation is correlated with size during ontogeny. Hence, nonallometric variation in shape (NAVSh) is likely to contribute to adaptation, even at reduced evolutionary time scales. We explored the contributions of allometric variation in shape (AVSh), NAVSh, and size variation to adaptive evolution in the angiosperm species Calceolaria polyrhiza. This strongly relies on oil-collecting bees for pollination and experienced transitions in the size of pollinators during the last 2 Ma. Using geometric morphometrics, we described corolla morphology in several populations across its distribution range. Variation in corolla shape was decomposed into an allometric and a nonallometric component, and corolla size was estimated. We then looked for the correlation between these aspects of morphology and the pollinator. Our results suggest that adaptation to pollinators with different sizes relied on NAVSh, which resulted from shifts in the allometric slope and from shape changes that occurred early in flower development. We conclude that NAVSh can contribute to adaptation in flowering plants, even at the species-level.
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  • 文章类型: Journal Article
    Body temperature is a key factor in physiological processes, influencing lizard performances; and life history traits are expected to generate variability of thermal preferences in different individuals. Gender, body size and reproductive condition may impose specific requirements on preferred body temperatures. If these three factors have different physiological functions and thermal requirements, then the preferred temperature may represent a compromise that optimizes these physiological functions. Therefore, the body temperatures that lizards select in a controlled environment may reflect a temperature that maximizes their physiological needs. The tegu lizard Tupinambis merianae is one of the largest lizards in South America and has wide ontogenetic variation in body size and sexual dimorphism. In the present study we evaluate intraspecific variability of thermal preferences of T. merianae. We determined the selected body temperature and the rate at which males and females attain their selected temperature, in relation to body size and reproductive condition. We also compared the behavior in the thermal gradient between males and females and between reproductive condition of individuals. Our study show that T. merianae selected body temperature within a narrow range of temperatures variation in the laboratory thermal gradient, with 36.24±1.49°C being the preferred temperature. We observed no significant differences between sex, body size and reproductive condition in thermal preferences. Accordingly, we suggest that the evaluated categories of T. merianae have similar thermal requirements. Males showed higher rates to obtain heat than females and reproductive females, higher rates than non-reproductive ones females. Moreover, males and reproductive females showed a more dynamic behavior in the thermal gradient. Therefore, even though they achieve the same selected temperature, they do it differentially.
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  • 文章类型: Journal Article
    社会系统中的种内变异性在灵长类动物学中获得了越来越多的认可。通过将额外的成年人纳入群体,许多灵长类动物物种在配对生活的社会组织中表现出变异性。虽然存在许多模型来解释灵长类动物配对生活,我们评估这种性状变异发生方式和原因的工具目前有限.在这里,我概述了一种方法:(i)利用概念模型来识别驱动配对生活的选择性力量;(ii)概述了社会组织变化的新可能原因;(iii)对社会行为进行全面的物种水平分析,以确定导致配对生活变化的因素。以白面sakis(Pitheciapithecia)为例说明了这种方法。该物种生活在包含“额外”成年雄性和/或雌性的雄性-雌性对或群体中。配对生活的各种概念模型表明,对群体外个体的高度同性侵略是白面saki社会系统的关键组成部分。可变配对生活在白面sakis中可能代表了在这场比赛中获得能力的替代策略,在这种情况下,动物在实现成功的群体防御和保持唯一的生殖接近配偶之间经历了相互矛盾的选择压力。此外,个体的独立决策可能会通过阻止其他动物采用最大化适应性的社会组织来产生社会差异。白面的萨基个人之间的关系和人口结构也为这一结论提供了和解支持。通过利用模型级和物种级方法,考虑到潜在的变异来源,研究人员可以深入了解在成对生活的社会组织中产生变异的因素。
    Intraspecific variability in social systems is gaining increased recognition in primatology. Many primate species display variability in pair-living social organizations through incorporating extra adults into the group. While numerous models exist to explain primate pair-living, our tools to assess how and why variation in this trait occurs are currently limited. Here I outline an approach which: (i) utilizes conceptual models to identify the selective forces driving pair-living; (ii) outlines novel possible causes for variability in social organization; and (iii) conducts a holistic species-level analysis of social behavior to determine the factors contributing to variation in pair-living. A case study on white-faced sakis (Pithecia pithecia) is used to exemplify this approach. This species lives in either male-female pairs or groups incorporating \"extra\" adult males and/or females. Various conceptual models of pair-living suggest that high same-sex aggression toward extra-group individuals is a key component of the white-faced saki social system. Variable pair-living in white-faced sakis likely represents alternative strategies to achieve competency in this competition, in which animals experience conflicting selection pressures between achieving successful group defense and maintaining sole reproductive access to mates. Additionally, independent decisions by individuals may generate social variation by preventing other animals from adopting a social organization that maximizes fitness. White-faced saki inter-individual relationships and demographic patterns also lend conciliatory support to this conclusion. By utilizing both model-level and species-level approaches, with a consideration for potential sources of variation, researchers can gain insight into the factors generating variation in pair-living social organizations.
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