Fusobacterium necrophorum

坏死梭杆菌
  • 文章类型: Journal Article
    目的:坏死梭杆菌是咽喉炎的常见原因。然而,没有关于何时诊断或治疗的指南。我们的目的是调查临床标准与咽喉炎坏死F.阳性之间的关联,并评估简单评分系统的预测潜力。
    方法:咽喉炎患者接受了尸检F.死角(PCR)检测,并被送到Skóne地区的医院,瑞典,在2013-2020年之间是合格的。数据是从电子图表审查和登记册中检索的。通过逻辑回归,我们调查了坏死F.阳性与预先指定的标准之间的关联:年龄13-30岁,症状持续时间≤3天,没有病毒症状(例如咳嗽,coryza),发烧,扁桃体肿胀/渗出物,淋巴结肿大和CRP≥50mg/L在二级分析中,通过关联强度对相关变量进行加权评分,并评估其对坏死F.的预测准确性.
    结果:纳入561例,184例(33%)有尸检F,与以下标准相关:年龄13-30岁,症状持续时间≤3天,没有病毒症状,扁桃体肿胀/渗出物和CRP≥50mg/L年龄13-30有最强的关联(OR5.795CI3.7-8.8)。加权后,这5个变量在预测建议的截止值时的坏死F.阳性的敏感性和特异性分别为68%和71%.
    结论:我们的结果表明,通过提供一个简单的评分系统,医院出现的坏死F.年龄在13-30岁之间是尸检F.的最强预测因子。前瞻性研究,涉及初级保健设置,除了提交给医院的病例外,还需要评估调查结果的普遍性。
    OBJECTIVE: Fusobacterium necrophorum is a common cause of pharyngotonsillitis. However, no guidelines exist on when to diagnose or treat it. We aimed to investigate associations between clinical criteria and F. necrophorum-positivity in pharyngotonsillitis and assess the predictive potential of a simple scoring system.
    METHODS: Pharyngotonsillitis patients who were tested for F. necrophorum (PCR) and presented to hospitals in the Skåne Region, Sweden, between 2013-2020 were eligible. Data were retrieved from electronic chart reviews and registries. By logistic regression we investigated associations between F. necrophorum-positivity and pre-specified criteria: age 13-30 years, symptom duration ≤ 3 days, absence of viral symptoms (e.g. cough, coryza), fever, tonsillar swelling/exudate, lymphadenopathy and CRP ≥ 50 mg/L. In secondary analyses, associated variables were weighted by strength of association into a score and its predictive accuracy of F. necrophorum was assessed.
    RESULTS: Among 561 cases included, 184 (33%) had F. necrophorum, which was associated with the following criteria: age 13-30, symptom duration ≤ 3 days, absence of viral symptoms, tonsillar swelling/exudate and CRP ≥ 50 mg/L. Age 13-30 had the strongest association (OR5.7 95%CI 3.7-8.8). After weighting, these five variables had a sensitivity and specificity of 68% and 71% respectively to predict F. necrophorum-positivity at the proposed cut-off.
    CONCLUSIONS: Our results suggest that F. necrophorum cases presenting to hospitals might be better distinguished from other pharyngotonsillitis cases by a simple scoring system presented, with age 13-30 being the strongest predictor for F. necrophorum. Prospective studies, involving primary care settings, are needed to evaluate generalisability of findings beyond cases presenting to hospitals.
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  • 文章类型: Journal Article
    绵羊脚病和传染性羊指性皮炎(CODD)导致绵羊跛行,影响福利和经济。以前的瑞典研究集中在个别屠宰羔羊,使全羊群的患病率较少。这项研究检查了瑞典绵羊群中的footrot和CODD的患病率,专注于成年羊。从99个羊群中,使用实时PCR对297个拭子进行了结节性二氏杆菌的分析,坏死梭杆菌,和密螺旋体属。拍摄采样的脚,并使用脚部和CODD的评分系统进行评估。结果表明,在个体和羊群水平上,足部患病率(足部得分≥2)分别为0.7%和2.0%,分别,而没有CODD的迹象。个体足部患病率低于2009年的一项研究,但与2020年的一项研究一致,都是在宰杀羔羊身上进行的。结节性双螺旋杆菌,F.坏死,和密螺旋体属。在5.7%中发现,1.3%,和65.0%的绵羊,在9.1%中,3.0%,和82.8%的羊群,分别。与2020年的研究相比,坏死F.和密螺旋体明显减少。,而D.Nodosus是一致的。总之,研究结果表明,脚病的患病率较低,CODD,D.Nodosus,和F.死角在瑞典羊群中。持续的监督和业主教育对于保持这一有利地位很重要。
    Ovine footrot and contagious ovine digital dermatitis (CODD) cause lameness in sheep, affecting welfare and economics. Previous Swedish studies focused on individual slaughter lambs, leaving flock-wide prevalence less explored. This study examined the prevalence of footrot and CODD in Swedish sheep flocks, focusing on adult sheep. From 99 flocks, 297 swabs were analysed using real-time PCR for Dichelobacter nodosus, Fusobacterium necrophorum, and Treponema spp. Sampled feet were photographed and assessed using scoring systems for footrot and CODD. Results indicated footrot prevalences (footrot score ≥ 2) of 0.7% and 2.0% at the individual and flock levels, respectively, whereas there were no signs of CODD. The individual footrot prevalence was lower than that from a 2009 study but aligned with a 2020 study, both conducted on slaughter lambs. Dichelobacter nodosus, F. necrophorum, and Treponema spp. were found in 5.7%, 1.3%, and 65.0% of sheep, and in 9.1%, 3.0%, and 82.8% of flocks, respectively. Compared to the 2020 study, there was a notable decrease in F. necrophorum and Treponema spp., while D. nodosus was consistent. In conclusion, the findings show a low prevalence of footrot, CODD, D. nodosus, and F. necrophorum in Swedish sheep flocks. Continuous surveillance and owner education are important to maintain this favourable status.
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  • 文章类型: Journal Article
    目的:本研究的目的是探索抗菌药物耐药基因决定因素,和表型抗生素敏感性,来自英国菌株集合的坏死梭杆菌的数据。研究了在公开可用的组装的全基因组序列中检测到的抗微生物抗性基因以进行比较。
    方法:从冷冻小瓶(Prolab)中恢复了三百八十五株(1982-2019年)。在测序(Illumina)和质量检查之后,374个完整基因组可用于分析。基因组被审问了,使用BioNumerics(bioMérieux;v8.1),是否存在已知的抗微生物药物抗性基因(ARGs)。313F的琼脂稀释敏感性结果。还检查了坏死菌分离株(2016-2021年)。
    结果:313株当代菌株的表型数据表明,三种分离株对青霉素具有潜在的耐药性,使用EUCASTv11.0断点,和73(23%)菌株使用v13.0分析。所有菌株都对使用v11.0指导的多种药物敏感,而不是克林霉素(n=2)。使用v13.0断点,还检测到甲硝唑(n=3)和美罗培南(n=13)的耐药性。tet(O),tet(M),tet(40),aph(3')-III,ant(6)-la和blaOXA-85ARGs存在于公开可用的基因组中。tet(M),tet(32),在英国菌株中发现了erm(A)和erm(B),相应提高克林霉素和四环素的最低抑制浓度。
    结论:不应假定对推荐用于治疗坏死F.感染的抗生素的敏感性。有证据表明口腔细菌可能传播ARG,和检测的一个转座子介导的β-内酰胺酶抗性决定子的坏死嗜血杆菌,必须继续监测表型和基因型抗菌药物敏感性趋势,和增加。
    OBJECTIVE: The objective of the study was to explore antimicrobial resistance gene determinant, and phenotypic antibiotic susceptibility, data for Fusobacterium necrophorum from a collection of UK strains. Antimicrobial resistance genes detected in publicly available assembled whole genome sequences were investigated for comparison.
    METHODS: Three hundred and eighty five F. necrophorum strains (1982-2019) were revived from cryovials (Prolab). Subsequent to sequencing (Illumina) and quality checking, 374 whole genomes were available for analysis. Genomes were interrogated, using BioNumerics (bioMérieux; v 8.1), for the presence of known antimicrobial resistance genes (ARGs). Agar dilution susceptibility results for 313 F. necrophorum isolates (2016-2021) were also examined.
    RESULTS: The phenotypic data for the 313 contemporary strains demonstrated potential resistance to penicillin in three isolates, using EUCAST v 11.0 breakpoints, and 73 (23%) strains using v 13.0 analysis. All strains were susceptible to multiple agents using v 11.0 guidance other than clindamycin (n = 2). Employing v 13.0 breakpoints, metronidazole (n = 3) and meropenem (n = 13) resistance were also detected. The tet(O), tet(M), tet(40), aph(3\')-III, ant(6)-la and blaOXA-85 ARGs were present in publicly available genomes. tet(M), tet(32), erm(A) and erm(B) were found within the UK strains, with correspondingly raised clindamycin and tetracycline minimum inhibitory concentrations.
    CONCLUSIONS: Susceptibility to antibiotics recommended for the treatment of F. necrophorum infections should not be assumed. With evidence of potential ARG transmission from oral bacteria, and the detection of a transposon-mediated beta-lactamase resistance determinant in F. necrophorum, surveillance of both phenotypic and genotypic antimicrobial susceptibility trends must continue, and increase.
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  • 文章类型: Journal Article
    背景:大多数咽扁桃体炎指南侧重于A组链球菌(GAS)的鉴定,以临床评分为指导,确定使用快速抗原检测测试的测试对象。然而,许多试验阴性的患者被评估为C/G组链球菌(GCS/GGS)和坏死梭杆菌,然而,它们的重要性仍在争论中。我们的主要目的是评估并发症和坏死F.GAS,或咽喉炎中的GCS/GGS。
    方法:这是一个回顾性研究,基于注册表的咽喉扁桃体炎病例研究,在Skáne地区测试了F.necrophorum(聚合酶链反应)和β-溶血性链球菌(培养),瑞典,2013-2020年。既往有并发症或抗生素(30天内)的患者被排除在外。数据是从登记册和电子图表中检索的。Logistic回归分析以并发症为主要结局,根据国际疾病分类,第十次修订,代码。结果阴性的病例(聚合酶链反应和培养)被设置为参考类别。30天内的并发症定义为扁桃体周围或咽部脓肿,中耳炎,鼻窦炎,败血症或败血症并发症,咽炎复发(15-30天后)或住院。
    结果:在3700个登记病例中,28%患有F.坏死菌,13%有GCS/GGS,10%有气体,54%的结果为阴性。30天并发症发生率很高(20%)。F.坏死(赔率比,1.8;95%置信区间,1.5-2.1)和GAS(1.9;1.5-2.5)与并发症呈正相关,而GCS/GGS呈负相关(0.7;0.4-0.98)。
    结论:我们的结果表明,坏死F.而GCS/GGS测试的相关性受到质疑。然而,哪些患者需要检测和治疗坏死F.
    Most pharyngotonsillitis guidelines focus on the identification of group A streptococci (GAS), guided by clinical scores determining whom to test with a rapid antigen detection test. Nevertheless, many patients testing negative with this test are evaluated for group C/G streptococci (GCS/GGS) and Fusobacterium necrophorum, yet their importance remains debated. Our primary aim was to evaluate associations between complications and findings of F. necrophorum, GAS, or GCS/GGS in pharyngotonsillitis.
    This was a retrospective, registry-based study of pharyngotonsillitis cases tested for F. necrophorum (polymerase chain reaction) and β-hemolytic streptococci (culture) in the Skåne Region, Sweden, in 2013-2020. Patients with prior complications or antibiotics (within 30 days) were excluded. Data were retrieved from registries and electronic charts. Logistic regression analyses were performed with a dichotomous composite outcome of complications as primary outcome, based on International Classification of Diseases, Tenth Revision, codes. Cases with negative results (polymerase chain reaction and culture) were set as reference category. Complications within 30 days were defined as peritonsillar or pharyngeal abscess, otitis, sinusitis, sepsis or septic complications, recurrence of pharyngotonsillitis (after 15-30 days) or hospitalization.
    Of 3700 registered cases, 28% had F. necrophorum, 13% had GCS/GGS, 10% had GAS, and 54% had negative results. The 30-day complication rates were high (20%). F. necrophorum (odds ratio, 1.8; 95% confidence interval, 1.5-2.1) and GAS (1.9; 1.5-2.5) were positively associated with complications, whereas GCS/GGS were negatively associated (0.7; 0.4-0.98).
    Our results indicate that F. necrophorum is a relevant pathogen in pharyngotonsillitis, whereas the relevance of testing for GCS/GGS is questioned. However, which patient to test and treat for F. necrophorum remains to be defined.
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  • 文章类型: Journal Article
    坏死梭杆菌引起一系列轻度至危及生命的感染,并且由于缺乏对其致病机制的了解,在诊断和治疗方面存在不确定性。这项研究表征了坏死F.的基因组,以比较其毒力因子并研究潜在的感染标志物。从咽扁桃体炎患者中分离出的27株坏死F.进行了全基因组测序,并与NCBI数据库中发布的42个基因组进行了比较。系统学,pangemome,分析了pan-GWAS和病毒组,以参考毒力因子研究菌株的变化。基于核心基因组的系统基因组树表现出三个进化枝,其中进化枝A属于F.死角亚种死角,进化枝B和C是F.坏疽亚种。Pan-GWAS和Pan-Virulome提出了一些与临床分离来源相关的标记基因,需要进一步验证。我们的研究强调了坏死嗜血杆菌感染发病机理的一些有趣特征。虽然动物分离基因组有一些标记基因,人类分离株的基因组与其临床分离来源没有明显的相关性.这促使人们考虑其他机制,例如共同感染或可能参与发病机理的宿主因素。
    Fusobacterium necrophorum causes a range of mild to life threatening infections and there is uncertainty in terms of diagnosis and treatment due to the lack of knowledge on their pathogenic mechanisms. This study characterised genomes of F. necrophorum to compare their virulence factors and investigate potential infection markers. 27 isolates of F. necrophorum from patients with pharyngotonsillitis were subjected to whole genome sequencing and compared with 42 genomes published in the NCBI database. Phylogenomics, pangemome, pan-GWAS and virulome were analysed to study strain variations with reference to virulence factors. Core genome based phylogenomic tree exhibited three clades of which Clade A belonged to F. necrophorum subsp necrophorum, clades B and C were F. necrophorum subsp funduliforme. Pan-GWAS and Pan-Virulome suggest some marker genes associated with clinical sources of isolation that needs further validation. Our study highlights some interesting features of the pathogenesis of F. necrophorum infections. Although the animal isolate genomes had some marker genes, the genomes of human isolates did not exhibit clear correlation to their clinical sources of isolation. This prompts to think of other mechanisms such as co-infections or host factors that can be involved in the pathogenesis.
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  • 文章类型: Journal Article
    目的:由厌氧坏死梭杆菌(F。坏死组织)通常会引起严重的并发症,如脑膜炎和鼻窦血栓形成。早期诊断很困难,部分原因是对具体的早期体征知之甚少。关于临床选择的抗微生物疗法的综合研究尚未完成,关于由嗜血杆菌引起的耳乳突炎的预后信息很少。需要更多关于这个主题的知识。
    方法:在这项回顾性队列研究中,我们纳入了过去10年在荷兰两个大学医学中心接受治疗的所有由坏死F.引起的耳乳突炎病例.从患者记录中收集数据,并使用独立样本T检验和Chi2检验进行分析。
    结果:本研究揭示了由嗜血杆菌引起的耳乳突炎可能诱发神经系统后遗症。因此,所有纳入的患者中有80%(n=16)由于坏死F.引起的耳乳突炎复发或并发症而在六个月内需要再次入院。年龄的平均值(范围),CRP和温度为4.5年(0.9-29.3),243mg/L(113-423)和40°C(37-41)。所有患者均住院并接受抗生素治疗,主要是甲硝唑(n=13/16)和β-内酰胺(n=15/16)。额外的治疗包含低分子量肝素(83%,n=10/12),地塞米松(78%,n=7/9)和/或手术(80%,n=12/16,其中9/12乳突切除术)。
    结论:患者和/或其父母在诊断为由坏死F.引起的耳乳突炎时需要了解这种潜在的不幸预后。为了提高早期诊断,应怀疑由坏死F.引起的耳乳突炎,因此在a)患有耳乳突炎的幼儿时立即进行培养,b)高CRP值,和/或c)呕吐和意识下降。
    OBJECTIVE: Otomastoiditis caused by the anaerobic Fusobacterium necrophorum (F. necrophorum) often induces severe complications, such as meningitis and sinus thrombosis. Early diagnosis is difficult, partly because little is known about specific early signs. Comprehensive research about clinically chosen antimicrobial therapy has not been done yet and prognostic information about otomastoiditis caused by F. necrophorum is scarce. More knowledge about this subject is required.
    METHODS: In this retrospective cohort study, we included all cases of otomastoiditis caused by F. necrophorum treated in two university medical centres in the Netherlands during the past 10 years. Data was gathered from patient records and analysed using independent sample T-tests and Chi2-tests.
    RESULTS: This study reveals that otomastoiditis caused by F. necrophorum potentially induces neurological sequelae. Thereby, 80% of all included patients (n = 16) needed readmission within six months due to recurrence or complications of otomastoiditis caused by F. necrophorum. Mean (range) of age, CRP and temperature were 4.5 years (0.9-29.3), 243 mg/L (113-423) and 40 °C (37-41). All patients were hospitalized and treated with antibiotics, mostly metronidazole (n = 13/16) and a β -lactam (n = 15/16). Additional treatment contained low molecular weight heparin (83%, n = 10/12), dexamethasone (78%, n = 7/9) and/or surgery (80%, n = 12/16, whereof 9/12 mastoidectomy).
    CONCLUSIONS: Patients and/or their parents need to be informed about this potential unfortunate prognosis when otomastoiditis caused by F. necrophorum is diagnosed. To improve early diagnosis, otomastoiditis caused by F. necrophorum should be suspected and therefore immediately cultured when a) young children present with otomastoiditis, with b) high CRP values, and/or c) vomiting and decreased consciousness.
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  • 文章类型: Journal Article
    BACKGROUND: Diagnosis and treatment of pharyngotonsillitis are commonly focused on group A streptococci (GAS), although the disease is often associated with other pathogens. While the incidence of pharyngotonsillitis is known to vary with season, seasonal variations in the prevalence of potential pathogens are sparsely explored. The aim of this study was to explore any seasonal variations in the use and outcome of rapid antigen detection tests (RADTs) for GAS and throat cultures among patients diagnosed with pharyngotonsillitis in primary care.
    METHODS: We retrieved and combined retrospective data from the electronic medical record system and the laboratory information system in Kronoberg County, Sweden. Primary care visits resulting in a diagnosis of tonsillitis or pharyngitis were included, covering the period 2013-2016. The monthly rate of visits was measured, along with the use and outcome of RADTs for GAS and throat cultures obtained on the date of diagnosis. The variations between calendar months were then analysed.
    RESULTS: We found variations between calendar months, not only in the mean rate of visits resulting in a diagnosis of pharyngotonsillitis (p < 0.001), but in the mean proportion of RADTs being positive for GAS among the diagnosed (p < 0.001), and in the mean proportion of visits associated with a throat culture (p < 0.001). A lower mean rate of visits in August and September coincided with a lower proportion of RADTs being positive for GAS among them, which correlated with a higher proportion of visits associated with a throat culture.
    CONCLUSIONS: This study suggests that the role of GAS in pharyngotonsillitis in Sweden is less prominent in August and September than during the rest of the year.
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  • 文章类型: Journal Article
    BACKGROUND: The role of non-group A streptococci and Fusobacterium necrophorum in pharyngotonsillitis has been disputed and few prospective studies have evaluated the effect of antibiotic treatment. This study uses registry data to investigate the relation between antibiotic prescription for pharyngotonsillitis in primary healthcare and return visits for pharyngotonsillitis, complications, and tonsillectomy.
    METHODS: Retrospective data were extracted from the regional electronic medical record system in Kronoberg County, Sweden, for all patients diagnosed with pharyngotonsillitis between 2012 and 2016. From these data, two cohorts were formed: one based on rapid antigen detection tests (RADT) for group A streptococci (GAS) and one based on routine throat cultures for β-haemolytic streptococci and F. necrophorum. The 90 days following the inclusion visit were assessed for new visits for pharyngotonsillitis, complications, and tonsillectomy, and related to bacterial aetiology and antibiotic prescriptions given at inclusion.
    RESULTS: In the RADT cohort (n = 13,781), antibiotic prescription for patients with a positive RADT for GAS was associated with fewer return visits for pharyngotonsillitis within 30 days compared with no prescription (8.7% vs. 12%; p = 0.02), but not with the complication rate within 30 days (1.5% vs. 1.8%; p = 0.7) or with the tonsillectomy rate within 90 days (0.27% vs. 0.26%; p = 1). In contrast, antibiotic prescription for patients with a negative RADT was associated with more return visits for pharyngotonsillitis within 30 days (9.7% vs. 7.0%; p = 0.01). In the culture cohort (n = 1 370), antibiotic prescription for patients with Streptococcus dysgalactiae ssp. equisimilis was associated with fewer return visits for pharyngotonsillitis within 30 days compared with no prescription (15% vs. 29%; p = 0.03).
    CONCLUSIONS: Antibiotic prescription was associated with fewer return visits for pharyngotonsillitis in patients with a positive RADT for GAS but with more return visits in patients with a negative RADT for GAS. There were no differences in purulent complications related to antibiotic prescription.
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  • 文章类型: Comparative Study
    While Fusobacterium necrophorum historically has been considered normal tonsillar flora, recent studies from Europe and the US have suggested that carriage occur transiently in adolescence and young adulthood. However, no studies originating from Africa exist. In this cross-sectional study of tonsillar carriage of F. necrophorum, we aimed to investigate geographical differences in tonsillar carriage rates of F. necrophorum in healthy participants aged 15-25 years in Sweden and Zambia and further investigate the age distribution of tonsillar carriage in Zambia. Specimens were obtained by tonsillar swabs and analyzed with real-time PCR for F. necrophorum. In participants aged 15-25 years, tonsillar carriage was more common in Sweden 21/100 (21%) than in Zambia 6/192 (3%), p < 0.001. In Zambian participants aged above 25 years tonsillar carriage was rare 1/76 (1%). In conclusion, the high rate of tonsillar carriage in participants aged 15-25 years in Sweden has implications on the interpretation of tonsillar findings in patients with pharyngotonsillitis. Interestingly, a geographical difference was found with tonsillar carriage rarely identified in Zambia.
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  • 文章类型: Journal Article
    UNASSIGNED: Lemierre\'s syndrome is typically caused by Fusobacterium necrophorum where an oropharyngeal infection is followed by septic internal jugular vein thrombophlebitis with subsequent septic embolization. Yet, the pathogenesis of septic thrombophlebitis, differences dependent on the presence of jugular vein thrombosis, and the role of anticoagulant therapy are insufficiently understood.
    UNASSIGNED: Patients with invasive infection with F. necrophorum and Lemierre\'s syndrome who had been investigated for jugular vein thrombosis were included from a previous population-based observational study in Sweden. Medical records were reviewed and compared in patients with and without jugular vein thrombosis. Then, patients with jugular vein thrombosis were compared by exposure to therapeutic, prophylactic, or no anticoagulation. Outcomes examined were thrombosis progression, early or late peripheral septic complications, chronic major sequelae, 30-day mortality, and major bleeding.
    UNASSIGNED: Fifty-one of 82 (62%) radiologically investigated patients with Lemierre\'s syndrome had jugular vein thrombosis. Patients with jugular vein thrombosis had lower platelet levels (median, 76 vs 112 ×109/L; P = .04) on presentation and more days to defervesence (12 vs 7 days; P = .03) yet similar rates of major sequelae and 30-day mortality. No significant differences in outcomes were seen between patients with jugular vein thrombosis exposed to therapeutic, prophylactic, or no anticoagulation therapy, yet study outcomes were rare.
    UNASSIGNED: Patients with Lemierre\'s syndrome with jugular vein thrombosis were more severely affected, yet had similar prognosis. Most patients with jugular vein thrombosis recovered well without therapeutic anticoagulation therapy, though adverse events were similarly rare in anticoagulated patients. The observational design and rarity of study outcomes require cautious interpretation.
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