FHIR

FHIR
  • 文章类型: Systematic Review
    用药错误是导致死亡的第三大原因。有几种方法可以防止处方错误,其中之一是使用计算机医师医嘱录入系统(CPOE)。在CPOE系统中,需要收集必要的数据,以便就处方药物和治疗计划做出决定。尽管许多CPOE系统已经在世界范围内开发,研究尚未确定CPOE系统的必要数据和数据元素。本研究旨在确定CPOE的数据元素,并使用快速医疗互操作性资源(FHIR)对这些数据进行标准化,以促进与电子健康记录(EHR)系统的数据共享和集成,并减少数据多样性。
    PubMed,WebofScience,Embase,搜索了截至2019年10月的Scopus研究数据库。两名审稿人独立评估了原始文章,以确定纳入本评论的资格。包括描述COPE系统数据元素的所有文章。数据元素是从包含的文章文本中获得的,tables,和数字。对提取的数据元素进行分类并将其映射到FHIR,以促进数据共享和与电子健康记录(EHR)系统的集成,并减少数据多样性。CPOE的最终数据元素分为FHIR的五个主要类别(基础,基地,临床,金融,和专业)和146个资源,在可能的地方。其中一名研究人员进行了绘图,并由第二名研究人员进行了检查和验证。如果数据元素无法映射到任何FHIR资源,此数据元素被认为是对最相关资源的扩展。
    我们通过数据库搜索检索了5162篇文章。经过全文评估,共包括21篇文章。总的来说,确定了270个数据元素并将其映射到FHIR标准。这些元素已在146个FHIR资源中的26个(18%)中报告。总的来说,71个数据元素被认为是一个扩展。
    这项研究的结果表明,CPOE系统中未使用相同的数据元素,并且这些系统的均匀性程度是有限的。提取的数据与FHIR标准中使用的数据元素的映射显示了这些系统符合现有标准的程度。考虑到这些系统设计中的标准,有助于开发人员设计出更连贯的系统,可以与其他系统共享数据。
    UNASSIGNED: Medication errors are the third leading cause of death. There are several methods to prevent prescription errors, one of which is to use a Computerized Physician Order Entry system (CPOE). In a CPOE system, necessary data needs to be collected so that making decisions about prescribing medications and treatment plans could be made. Although many CPOE systems have been developed worldwide, studies have yet to identify the necessary data and data elements of CPOE systems. This study aims to identify data elements of CPOE and standardize these data with Fast Healthcare Interoperability Resources (FHIR) to facilitate data sharing and integration with the electronic health record (EHR) system and reduce data diversity.
    UNASSIGNED: PubMed, Web of Science, Embase, and Scopus databases for studies up to October 2019 were searched. Two reviewers independently assessed original articles to determine eligibility for inclusion in this review. All articles describing data elements of a COPE system were included. Data elements were obtained from the included articles\' text, tables, and figures.Classification of the extracted data elements and mapping them to FHIR was done to facilitate data sharing and integration with the electronic health record (EHR) system and reduce data diversity. The final data elements of CPOE were categorized into five main categories of FHIR (foundation, base, clinical, financial, and specialized) and 146 resources, where possible. One of the researchers did mapping and checked and verified by the second researcher. If a data element could not be mapped to any FHIR resources, this data element was considered an extension to the most relevant resource.
    UNASSIGNED: We retrieved 5162 articles through database searches. After the full-text assessment, 21 articles were included. In total, 270 data elements were identified and mapped to the FHIR standard. These elements have been reported in 26 FHIR resources of 146 ones (18%). In total, 71 data elements were considered an extension.
    UNASSIGNED: The results of this study showed that the same data elements were not used in the CPOE systems, and the degree of homogeneity of these systems is limited. The mapping of extracted data with data elements used in the FHIR standard shows the extent to which these systems comply with existing standards. Considering the standards in these systems\' design helps developers design more coherent systems that can share data with other systems.
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  • 文章类型: Journal Article
    支持机器学习的临床信息系统(ML-CIS)具有推动医疗保健提供和研究的潜力。快速医疗保健互操作性资源(FHIR)数据标准已越来越多地用于开发这些系统。然而,将FHIR应用于ML-CIS的方法是可变的。
    这项研究评估和比较了功能,优势,以及现有系统的弱点,并提出了优化ML-CIS未来工作的指导方针。
    Embase,PubMed,和WebofScience搜索了描述机器学习系统的文章,这些系统用于符合FHIR标准的临床数据分析或决策支持。有关每个系统功能的信息,数据源,格式,安全,性能,资源需求,可扩展性,优势,并对不同系统的局限性进行了比较。
    总共39篇描述基于FHIR的ML-CIS的文章根据其主要重点分为以下三类:临床决策支持系统(n=18),数据管理和分析平台(n=10),或辅助模块和应用编程接口(n=11)。模型优势包括云系统的新颖使用,贝叶斯网络,可视化策略,以及将非结构化或自由文本数据转换为FHIR框架的技术。许多智能系统缺乏电子健康记录互操作性和外部验证的临床疗效证据。
    当前ML-CIS的缺点可以通过结合模块化和可互操作的数据管理来解决,分析平台,安全的机构间数据交换,和应用程序编程接口,具有足够的可扩展性,以支持使用具有不同实施方式的电子健康记录平台的实时和前瞻性临床应用程序。
    UNASSIGNED: Machine learning-enabled clinical information systems (ML-CISs) have the potential to drive health care delivery and research. The Fast Healthcare Interoperability Resources (FHIR) data standard has been increasingly applied in developing these systems. However, methods for applying FHIR to ML-CISs are variable.
    UNASSIGNED: This study evaluates and compares the functionalities, strengths, and weaknesses of existing systems and proposes guidelines for optimizing future work with ML-CISs.
    UNASSIGNED: Embase, PubMed, and Web of Science were searched for articles describing machine learning systems that were used for clinical data analytics or decision support in compliance with FHIR standards. Information regarding each system\'s functionality, data sources, formats, security, performance, resource requirements, scalability, strengths, and limitations was compared across systems.
    UNASSIGNED: A total of 39 articles describing FHIR-based ML-CISs were divided into the following three categories according to their primary focus: clinical decision support systems (n=18), data management and analytic platforms (n=10), or auxiliary modules and application programming interfaces (n=11). Model strengths included novel use of cloud systems, Bayesian networks, visualization strategies, and techniques for translating unstructured or free-text data to FHIR frameworks. Many intelligent systems lacked electronic health record interoperability and externally validated evidence of clinical efficacy.
    UNASSIGNED: Shortcomings in current ML-CISs can be addressed by incorporating modular and interoperable data management, analytic platforms, secure interinstitutional data exchange, and application programming interfaces with adequate scalability to support both real-time and prospective clinical applications that use electronic health record platforms with diverse implementations.
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  • 文章类型: Journal Article
    背景:标准的快速医疗保健互操作性资源(FHIR)广泛用于健康信息技术。然而,它作为健康研究的标准仍然不那么普遍。为了更有效地使用现有数据源进行健康研究,数据互操作性变得越来越重要。FHIR通过提供“公共卫生与研究”和“循证医学”等资源领域来提供解决方案,同时使用已经建立的网络技术。因此,FHIR可以帮助标准化不同数据源的数据,并提高健康研究的互操作性。
    目的:我们研究的目的是对现有文献进行系统回顾,并确定FHIR在健康研究中的实施现状和未来可能的方向。
    方法:我们搜索了PubMed/MEDLINE,Embase,WebofScience,IEEEXplore,和Cochrane图书馆数据库,用于2011年至2022年发表的研究。包括调查FHIR在健康研究中使用的研究。2011年之前发表的文章,摘要,reviews,社论,专家意见被排除在外。我们遵循PRISMA(系统审查和荟萃分析的首选报告项目)指南,并在PROSPERO(CRD42021235393)注册了这项研究。在表格和附图中进行数据合成。
    结果:我们确定了总共998项研究,其中49项研究符合纳入条件.在49项研究中,大多数(73%,n=36)涵盖了临床研究领域,而其余的研究集中在公共卫生或流行病学(6%,n=3)或未指定他们的研究领域(20%,n=10)。研究使用FHIR进行数据采集(29%,n=14),数据标准化(41%,n=20),分析(12%,n=6),招聘(14%,n=7),和同意管理(4%,n=2)。大多数(55%,27/49)的研究采用了通用方法,55%(12/22)的研究侧重于特定的医学专业(传染病,基因组学,肿瘤学,环境卫生,成像,和肺动脉高压)报告了它们的解决方案可用于其他用例。大多数(63%,31/49)的研究报告使用其他数据模型或术语:医学临床术语的系统化命名法(29%,n=14),逻辑观察标识符名称和代码(37%,n=18),国际疾病分类第10次修订(18%,n=9),观察性医疗结果伙伴关系通用数据模型(12%,n=6),和其他(43%,n=21)。只有4项(8%)研究使用了“公共卫生与研究”领域的FHIR资源。\"使用FHIR的限制包括FHIR资源内容的可能变化,安全,法律事务,以及对FHIR服务器的需求。
    结论:我们的审查发现,FHIR可以在健康研究中实施,在大多数用例中,应用领域是广泛和可推广的。国际术语的实施很普遍,和其他标准,如观察医疗结果伙伴关系通用数据模型可以用作FHIR的补充。限制,如FHIR内容的变化,缺乏FHIR的实施,安全,和法律事务需要在未来的版本中解决,以扩大FHIR的使用,因此,健康研究中的互操作性。
    BACKGROUND: The standard Fast Healthcare Interoperability Resources (FHIR) is widely used in health information technology. However, its use as a standard for health research is still less prevalent. To use existing data sources more efficiently for health research, data interoperability becomes increasingly important. FHIR provides solutions by offering resource domains such as \"Public Health & Research\" and \"Evidence-Based Medicine\" while using already established web technologies. Therefore, FHIR could help standardize data across different data sources and improve interoperability in health research.
    OBJECTIVE: The aim of our study was to provide a systematic review of existing literature and determine the current state of FHIR implementations in health research and possible future directions.
    METHODS: We searched the PubMed/MEDLINE, Embase, Web of Science, IEEE Xplore, and Cochrane Library databases for studies published from 2011 to 2022. Studies investigating the use of FHIR in health research were included. Articles published before 2011, abstracts, reviews, editorials, and expert opinions were excluded. We followed the PRISMA (Preferred Reporting Items for Systematic Reviews and Meta-Analyses) guidelines and registered this study with PROSPERO (CRD42021235393). Data synthesis was done in tables and figures.
    RESULTS: We identified a total of 998 studies, of which 49 studies were eligible for inclusion. Of the 49 studies, most (73%, n=36) covered the domain of clinical research, whereas the remaining studies focused on public health or epidemiology (6%, n=3) or did not specify their research domain (20%, n=10). Studies used FHIR for data capture (29%, n=14), standardization of data (41%, n=20), analysis (12%, n=6), recruitment (14%, n=7), and consent management (4%, n=2). Most (55%, 27/49) of the studies had a generic approach, and 55% (12/22) of the studies focusing on specific medical specialties (infectious disease, genomics, oncology, environmental health, imaging, and pulmonary hypertension) reported their solutions to be conferrable to other use cases. Most (63%, 31/49) of the studies reported using additional data models or terminologies: Systematized Nomenclature of Medicine Clinical Terms (29%, n=14), Logical Observation Identifiers Names and Codes (37%, n=18), International Classification of Diseases 10th Revision (18%, n=9), Observational Medical Outcomes Partnership common data model (12%, n=6), and others (43%, n=21). Only 4 (8%) studies used a FHIR resource from the domain \"Public Health & Research.\" Limitations using FHIR included the possible change in the content of FHIR resources, safety, legal matters, and the need for a FHIR server.
    CONCLUSIONS: Our review found that FHIR can be implemented in health research, and the areas of application are broad and generalizable in most use cases. The implementation of international terminologies was common, and other standards such as the Observational Medical Outcomes Partnership common data model could be used as a complement to FHIR. Limitations such as the change of FHIR content, lack of FHIR implementation, safety, and legal matters need to be addressed in future releases to expand the use of FHIR and, therefore, interoperability in health research.
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  • 文章类型: Journal Article
    信息技术已经将医疗保健部门的纸质文件转变为数字形式,患者信息以电子方式从一个地方转移到另一个地方。然而,由于缺乏适当的标准,在这一领域仍然存在挑战和问题需要解决,新技术的发展(移动设备,片剂,无处不在的计算),以及不愿分享患者信息的医疗保健提供者。因此,我们进行了扎实的系统文献综述,以了解这项新技术在卫生保健领域的应用.据我们所知,缺乏针对基于快速健康互操作性资源(FHIR)的电子健康记录(EHRs)的全面系统文献综述.此外,FHIR是最新的标准,正处于发展的初级阶段。因此,这是一个热门的研究课题,在该领域具有巨大的进一步研究潜力。
    本研究的主要目的是探索和执行有关FHIR的文献的系统综述,包括挑战,实施,机遇,以及未来的FHIR应用。
    2020年1月,我们通过计算机科学和医疗保健领域的所有主要数字数据库搜索了2012年1月至2019年12月发表的文章,包括ACM,IEEEExplorer,Springer,谷歌学者,PubMed,和科学直接。我们确定了在该领域发表的8181篇科学论文,其中80项符合我们的纳入标准,供进一步审议。
    对选定的80篇科学论文进行了系统回顾,我们确定了悬而未决的问题,挑战,实施模型,使用的资源,受益人申请,数据迁移方法,和FHIR的目标。
    本系统综述中进行的文献分析强调了FHIR在不久的将来在医疗保健领域中的重要作用。
    Information technology has shifted paper-based documentation in the health care sector into a digital form, in which patient information is transferred electronically from one place to another. However, there remain challenges and issues to resolve in this domain owing to the lack of proper standards, the growth of new technologies (mobile devices, tablets, ubiquitous computing), and health care providers who are reluctant to share patient information. Therefore, a solid systematic literature review was performed to understand the use of this new technology in the health care sector. To the best of our knowledge, there is a lack of comprehensive systematic literature reviews that focus on Fast Health Interoperability Resources (FHIR)-based electronic health records (EHRs). In addition, FHIR is the latest standard, which is in an infancy stage of development. Therefore, this is a hot research topic with great potential for further research in this domain.
    The main aim of this study was to explore and perform a systematic review of the literature related to FHIR, including the challenges, implementation, opportunities, and future FHIR applications.
    In January 2020, we searched articles published from January 2012 to December 2019 via all major digital databases in the field of computer science and health care, including ACM, IEEE Explorer, Springer, Google Scholar, PubMed, and ScienceDirect. We identified 8181 scientific articles published in this field, 80 of which met our inclusion criteria for further consideration.
    The selected 80 scientific articles were reviewed systematically, and we identified open questions, challenges, implementation models, used resources, beneficiary applications, data migration approaches, and goals of FHIR.
    The literature analysis performed in this systematic review highlights the important role of FHIR in the health care domain in the near future.
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