Disease modelling

疾病建模
  • 文章类型: Journal Article
    目前,炎症性肠病(IBD)的临床前模型不足,限制研究和新疗法之间的翻译。这尤其适用于克罗恩病(CD),由于相关模型的严重缺乏阻碍了研究的进展。为了解决这个问题,我们提出了体外人IBD粘膜模型,在一个模型系统中同时概括了IBD的多种病理标志-免疫细胞浸润,基质重塑和上皮破坏。刺激模型可诱导IBD组织常见的上皮畸变,包括形态学改变,微绒毛异常,claudin基因表达改变和通透性增加。炎性生物标志物也显著增加,包括细胞因子和趋化因子,这些细胞因子和趋化因子是IBD发病机理的组成部分。细胞外基质重塑的证据,包括上调的基质金属蛋白酶和改变的基底膜成分,表明该模型模拟了与CD造瘘非常相似的病理性基质重塑事件。重要的是,MMP-9是最丰富的MMP并且模拟在IBD组织中观察到的独特定位。发炎的模型随后用于阐明TNF-α和IFN-γ在肠基质重塑中的参与,其中TNF-α而不是IFN-γ诱导MMP上调,特别是MMP-3和MMP-9。总的来说,我们的结果证明了IBD模型用于IBD临床前研究的潜力,特别是对于fistulisingCD。
    At present, preclinical models of inflammatory bowel disease (IBD) are insufficient, limiting translation between research and new therapeutics. This is especially true for fistulising Crohn\'s disease (CD), as the severe lack of relevant models hinders research progression. To address this, we present in vitro human IBD mucosal models that recapitulate multiple pathological hallmarks of IBD simultaneously in one model system - immune cell infiltration, stromal remodelling and epithelial disruption. Stimulation of models induces epithelial aberrations common in IBD tissue including altered morphology, microvilli abnormalities, claudin gene expression changes and increased permeability. Inflammatory biomarkers are also significantly increased including cytokines and chemokines integral to IBD pathogenesis. Evidence of extracellular matrix remodelling, including upregulated matrix-metalloproteinases and altered basement membrane components, suggests the models simulate pathological stromal remodelling events that closely resemble fistulising CD. Importantly, MMP-9 is the most abundant MMP and mimics the unique localisation observed in IBD tissue. The inflamed models were subsequently used to elucidate the involvement of TNF-α and IFN- γ in intestinal stromal remodelling, in which TNF-α but not IFN- γ induced MMP upregulation, specifically of MMP-3 and MMP-9. Collectively, our results demonstrate the potential of the IBD models for use in preclinical research in IBD, particularly for fistulising CD.
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  • 文章类型: Review
    在过去的几十年中,预期寿命的空前增长导致了全球人口老龄化的增加,与年龄相关的疾病成为一个日益增长的社会,经济,和医疗负担。这促进了科学和医学研究界的重大努力,以开发和改进治疗方法,以延缓衰老和与年龄相关的功能衰退和疾病,并扩大健康范围。通过重编程人类体细胞建立诱导多能干细胞(iPSC)彻底改变了人类疾病的建模和理解。iPSCs相对于其他人类多能干细胞具有主要优势,因为它们的获得不需要像胚胎干细胞那样破坏胚胎,并且作为成体干细胞没有有限的增殖或分化潜力。此外,iPSC可以从健康个体或患者的体细胞产生,这使得iPSC技术成为一种有前途的方法来模拟和破译衰老过程和年龄相关疾病的潜在机制,研究药物作用,并开发新的治疗方法。这篇综述讨论了过去十年中使用iPSC技术研究最常见的与年龄相关的疾病所取得的进展。包括年龄相关性黄斑变性(AMD),神经退行性疾病和心血管疾病,脑中风,癌症,糖尿病,和骨关节炎。
    The unprecedented rise in life expectancy observed in the last decades is leading to a global increase in the ageing population, and age-associated diseases became an increasing societal, economic, and medical burden. This has boosted major efforts in the scientific and medical research communities to develop and improve therapies to delay ageing and age-associated functional decline and diseases, and to expand health span. The establishment of induced pluripotent stem cells (iPSCs) by reprogramming human somatic cells has revolutionised the modelling and understanding of human diseases. iPSCs have a major advantage relative to other human pluripotent stem cells as their obtention does not require the destruction of embryos like embryonic stem cells do, and do not have a limited proliferation or differentiation potential as adult stem cells. Besides, iPSCs can be generated from somatic cells from healthy individuals or patients, which makes iPSC technology a promising approach to model and decipher the mechanisms underlying the ageing process and age-associated diseases, study drug effects, and develop new therapeutic approaches. This review discusses the advances made in the last decade using iPSC technology to study the most common age-associated diseases, including age-related macular degeneration (AMD), neurodegenerative and cardiovascular diseases, brain stroke, cancer, diabetes, and osteoarthritis.
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  • 文章类型: Journal Article
    适当可靠的研究模型的可用性有助于研究人员了解疾病的发生和发展。历史上,动物模型在椎间盘退行性疾病的研究中,但是椎间盘退变(IDD)是一个精确而复杂的过程,需要在特定的组织微环境中出现和发生,和动物退化模型不能完全模拟这些参数。必须克服这些挑战,特别是当动物模型不能完全概括人类的复杂病理时。在过去的几年里,细胞疾病模型的研究取得了重要进展,髓核细胞(NPC)变性模型的构建已成为研究IDD发生发展过程中不可或缺的一步。这里,介绍了几种不同的NPC退化模型的构建方法和建模效果的检验指标。列举了不同方法构建的细胞模型的实际应用,筛选和评价了建立变性细胞模型的有效方法,探讨了IDD的发生机制。
    The availability of an appropriate and reliable research model is helpful for researchers to understand the occurrence and development of diseases. Historically, animal models have been beneficial in the study of intervertebral disc degenerative diseases, but intervertebral disc degeneration (IDD) is a precise and complex process that needs to appear and occur in a specific tissue microenvironment, and animal degeneration models cannot fully simulate these parameters. These challenges must be overcome, especially when animal models cannot fully generalise the complex pathology of humans. In the past few years, the research on the cell disease model has made important progress, and the construction of the nucleus pulposus cell (NPC) degeneration model has become an indispensable step in studying the occurrence and development of IDD. Here, several different methods of constructing NPC degeneration models and indicators for testing the effect of modelling are introduced. The practical applications of cell models constructed by different methods are enumerated to screen and evaluate effective methods of establishing degenerative cell models and explore the mechanism of IDD.
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  • 文章类型: Journal Article
    胎盘是起源于头端外胚层的胚胎结构,可产生高度多样化的器官和组织,包括垂体前叶,配对的感觉器官和颅感觉神经节。他们的发展,包括潜在的基因调控网络和信号通路,大部分都是动物模型的特征。在这篇评论中,我们描述了如何通过人类多能干细胞向胎盘祖细胞及其衍生物分化来概括胎盘的发育,突出了这个高度可扩展平台作为研究人类placodes发展的最佳体外工具的价值,并确定其发展过程中特定于人类的机制,功能和病理学。
    Placodes are embryonic structures originating from the rostral ectoderm that give rise to highly diverse organs and tissues, comprising the anterior pituitary gland, paired sense organs and cranial sensory ganglia. Their development, including the underlying gene regulatory networks and signalling pathways, have been for the most part characterised in animal models. In this Review, we describe how placode development can be recapitulated by the differentiation of human pluripotent stem cells towards placode progenitors and their derivatives, highlighting the value of this highly scalable platform as an optimal in vitro tool to study the development of human placodes, and identify human-specific mechanisms in their development, function and pathology.
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  • 文章类型: Journal Article
    髓鞘形成对于中枢神经系统(CNS)形成至关重要,健康,和功能。少突胶质细胞在健康和疾病中的异质性以及小鼠和人类之间不同的CNS基因表达谱的新证据支持了可实验处理的人类髓鞘形成系统的发展。这里,我们开发了人类iPSC衍生的髓鞘形成类器官(\"髓鞘形成\")和定量工具来研究髓鞘形成从少突形成到致密髓鞘形成和髓鞘轴突组织。使用患者来源的细胞,我们模拟了有髓轴突的单基因疾病(Nfasc155缺陷),重述受损的结旁轴-神经胶质连接形成。我们还验证了髓鞘用于髓鞘形成的药理学评估的用途-无论是在单个少突胶质细胞的水平还是在整个髓鞘形成的全球水平-并证明了髓鞘形成的减少是对突触小泡释放抑制的反应。我们的研究为研究人类髓鞘发育提供了一个平台,疾病,和适应性髓鞘形成。
    Myelination is essential for central nervous system (CNS) formation, health, and function. Emerging evidence of oligodendrocyte heterogeneity in health and disease and divergent CNS gene expression profiles between mice and humans supports the development of experimentally tractable human myelination systems. Here, we developed human iPSC-derived myelinating organoids (\"myelinoids\") and quantitative tools to study myelination from oligodendrogenesis through to compact myelin formation and myelinated axon organization. Using patient-derived cells, we modeled a monogenetic disease of myelinated axons (Nfasc155 deficiency), recapitulating impaired paranodal axo-glial junction formation. We also validated the use of myelinoids for pharmacological assessment of myelination-both at the level of individual oligodendrocytes and globally across whole myelinoids-and demonstrated reduced myelination in response to suppressed synaptic vesicle release. Our study provides a platform to investigate human myelin development, disease, and adaptive myelination.
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  • 文章类型: Journal Article
    背景:全球疾病负担(GBD)方法通过结合致命(生命损失年数)和基于非致命负担患病率的残疾生活年数(PYLDs)估算来估算疾病负担。尽管南非有数据估计死亡率,用于估计非致死性负担的患病率数据很少.来自南非GBD研究的PYLD估计可能会被使用。然而,在第二次南非国家疾病负担(SANBD2)和2013年GBD研究中,南非的死亡率估计值存在差异.目标:我们通过探索不同的疾病建模场景,研究了利用GBDPYLD估计值治疗中风和糖尿病的可行性。方法:DisModII软件使用当地流行病学参数和20-79岁人群的人口统计学数据,从模型中生成2010年南非中风和糖尿病PYLDs。我们调查了1)死因包络差异对PYLD估计的影响,2)特定原因死亡率估计的差异(中风增加/减少15%,糖尿病增加/减少30%),和3)使用与其他国家或地区参数相比的局部疾病参数的差异。差异表示为比率,平均比率和比率范围。结果:使用GBD死因包络(死亡人数比SANBD2多16%)并保持其他参数不变,男性中风和糖尿病的PYLDs的年龄特异性比率介于0.89和1.07之间(平均0.98)。对于女性观察到类似的结果。年龄特异性卒中死亡率的15%变化表明,PYLDs的比率比较差异很小(范围为0.98-1.02),而年龄特异性糖尿病死亡率的30%变化导致PYLDs的比率范围为0.96-1.07。结论:这项研究表明,GBD非致命负担估计值(PYLDs)可用于SANBD2研究中的中风和糖尿病非致命负担。
    Background: The Global Burden of Disease (GBD) approach estimates disease burden by combining fatal (years of life lost) and non-fatal burden prevalence-based years of life lived with disability (PYLDs) estimates. Although South Africa has data to estimate mortality, prevalence data to estimate non-fatal burden are sparse. PYLD estimates from the GBD study for South Africa can potentially be used. However, there is a divergence in mortality estimates for South Africa between the second South African National Burden of Disease (SANBD2) and 2013 GBD studies. Objective: We investigated the feasibility of utilising GBD PYLD estimates for stroke and diabetes by exploring different disease modelling scenarios. Method: DisMod II software-generated South African stroke and diabetes PYLDs for 2010 from models using local epidemiological parameters and demographic data for people 20-79 years old. We investigated the impact on PYLD estimates of 1) differences in the cause-of-death envelope, 2) differences in the cause-specific mortality estimates (increase/decrease by 15% for stroke and 30% for diabetes), and 3) difference using local disease parameters compared to other country or region parameters. Differences were expressed as ratios, average ratios and ratio ranges. Results: Using the GBD cause-of-death envelope (16% more deaths than SANBD2) and holding other parameters constant yielded age-specific ratios of PYLDs for stroke and diabetes ranging between 0.89 and 1.07 (average 0.98) for males. Similar results were observed for females. A 15% change in age-specific stroke mortality showed little difference in the ratio comparison of PYLDs (range 0.98-1.02) while a 30% change in age-specific diabetes mortality resulted in a ratio range of 0.96-1.07 for PYLDs depending on age. Conclusion: This study showed that GBD non-fatal burden estimates (PYLDs) can be used for stroke and diabetes non-fatal burden in the SANBD2 study.
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  • 文章类型: Journal Article
    The Russian Federation has very high cardiovascular disease (CVD) mortality rates compared with countries of similar economic development. This cross-sectional study compares the characteristics of CVD-free participants with and without recent primary care contact to ascertain their CVD risk and health status.
    A total of 2774 participants aged 40-69 years with no self-reported CVD history were selected from a population-based study conducted in Arkhangelsk and Novosibirsk, Russian Federation, 2015-2018. A range of co-variates related to socio-demographics, health and health behaviours were included. Recent primary care contact was defined as seeing primary care doctor in the past year or having attended a general health check under the 2013 Dispansarisation programme.
    The proportion with no recent primary care contact was 32.3% (95% CI 29.7% to 35.0%) in males, 16.3% (95% CI 14.6% to 18.2%) in females, and 23.1% (95% CI 21.6% to 24.7%) overall. In gender-specific age-adjusted analyses, no recent contact was also associated with low education, smoking, very good to excellent self-rated health, no chest pain, CVD 10-year SCORE risk 5+%, absence of hypertension control, absence of hypertension awareness and absence of care-intensive conditions. Among those with no contact: 37% current smokers, 34% with 5+% 10-year CVD risk, 32% untreated hypertension, 20% non-anginal chest pain, 18% problem drinkers, 14% uncontrolled hypertension and 9% Grade 1-2 angina. The proportion without general health check attendance was 54.6%.
    Primary care and community interventions would be required to proactively reach sections of 40-69 year olds currently not in contact with primary care services to reduce their CVD risk through diagnosis, treatment, lifestyle recommendations and active follow-up.
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  • 文章类型: Journal Article
    原发性肝癌,主要包括肝细胞癌(HCC)和胆管癌(CCA),仍然是世界上最致命的恶性肿瘤之一。这种高度恶性与肿瘤细胞之间的复杂和动态相互作用有关,基质细胞和细胞外环境。可以概括肿瘤的新型体外模型对于增加我们对肝癌的理解至关重要。在这里,原发性肝癌衍生的类器官由于其患者特异性开辟了新的途径,自组织能力和许多肿瘤特性的潜在概括。类器官仅来自上皮,但是纳入共培养模型可以研究肿瘤微环境的细胞成分。然而,细胞外成分在癌症进展中也起着至关重要的作用,目前的体外模型缺乏代表性。在这次审查中,通过与其他细胞培养系统的比较,在肝癌模型的背景下讨论了类器官技术。此外,将强调肿瘤细胞外环境在原发性肝癌中的作用,并强调其在体外建模中的重要性。将新的基于类器官的模型与包含天然肿瘤微环境的模型融合可能导致可以更好地在体内概括肝肿瘤的实验模型。
    Primary liver cancer, consisting predominantly of hepatocellular carcinoma (HCC) and cholangiocarcinoma (CCA), remains one of the most lethal malignancies worldwide. This high malignancy is related to the complex and dynamic interactions between tumour cells, stromal cells and the extracellular environment. Novel in vitro models that can recapitulate the tumour are essential in increasing our understanding of liver cancer. Herein, primary liver cancer-derived organoids have opened up new avenues due to their patient-specificity, self-organizing ability and potential recapitulation of many of the tumour properties. Organoids are solely of epithelial origin, but incorporation into co-culture models can enable the investigation of the cellular component of the tumour microenvironment. However, the extracellular component also plays a vital role in cancer progression and representation is lacking within current in vitro models. In this review, organoid technology is discussed in the context of liver cancer models through comparisons to other cell culture systems. In addition, the role of the tumour extracellular environment in primary liver cancer will be highlighted with an emphasis on its importance in in vitro modelling. Converging novel organoid-based models with models incorporating the native tumour microenvironment could lead to experimental models that can better recapitulate liver tumours in vivo.
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  • 文章类型: Journal Article
    High-throughput phenotypic screening enables the identification of new therapeutic targets even when the molecular mechanism underlying the disease is unknown. In the case of neurodegenerative disease, there is a dire need to identify new targets that can ameliorate, halt, or reverse degeneration. Stem cell-based disease models are particularly powerful tools for phenotypic screening because they use the same cell type affected in patients. Here, we describe the expansion of mouse stem cells and human induced pluripotent stem cells as well as the differentiation of these cells into neural lineages that, when exposed to neuroinflammatory stress, can be used for compound screening followed by hit identification, validation, and target deconvolution.
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