Convolutional neural network

卷积神经网络
  • 文章类型: Journal Article
    确定潜在有毒元素(PTE)的来源和空间分布是土壤污染调查的关键问题。然而,对源贡献的不确定性估计仍然缺乏,准确的空间预测仍然具有挑战性。将稳健的贝叶斯多元受体模型(RBMRM)应用于青州市土壤数据集(429个样本中有8个PTE),计算具有不确定性的源贡献。提出了多任务卷积神经网络(MTCNN)来预测土壤PTE的空间分布。RBMRM提供了三个来源,与US-EPA正矩阵分解一致。以天然来源为主的As,Cr,Cu,和镍含量(78.5%~86.1%),贡献了37.1%,61.0%,和65.9%的Cd,Pb,Zn,不确定度指数(UI)<26.7%,不确定度低。工业,交通,农业来源对Cd有显著影响,Pb,和锌(30.2%~61.9%),UI<39.3%。汞主要来自大气沉积(99.1%),不确定性相对较高(UI=87.7%)。MTCNN获得了令人满意的准确性,R2为0.357-0.896,nRMSE为0.092-0.366。As的空间分布,Cd,Cr,Cu,Ni,Pb,和Zn受母体材料的影响。Cd,Hg,Pb,锌在城市地区表现出明显的热点。这项工作进行了新的方法探索,并对土壤污染治理提出了实际意义。
    Determining sources and spatial distributions of potentially toxic elements (PTEs) is a crucial issue of soil pollution survey. However, uncertainty estimation for source contributions remains lack, and accurate spatial prediction is still challenging. Robust Bayesian multivariate receptor model (RBMRM) was applied to the soil dataset of Qingzhou City (8 PTEs in 429 samples), to calculate source contributions with uncertainties. Multi-task convolutional neural network (MTCNN) was proposed to predict spatial distributions of soil PTEs. RBMRM afforded three sources, consistent with US-EPA positive matrix factorization. Natural source dominated As, Cr, Cu, and Ni contents (78.5 %∼86.1 %), and contributed 37.1 %, 61.0 %, and 65.9 % of Cd, Pb, and Zn, exhibiting low uncertainties with uncertainty index (UI) < 26.7 %. Industrial, traffic, and agricultural sources had significant influences on Cd, Pb, and Zn (30.2 %∼61.9 %), with UI < 39.3 %. Hg originated dominantly from atmosphere deposition (99.1 %), with relatively high uncertainties (UI=87.7 %). MTCNN acquired satisfactory accuracies, with R2 of 0.357-0.896 and nRMSE of 0.092-0.366. Spatial distributions of As, Cd, Cr, Cu, Ni, Pb, and Zn were influenced by parent materials. Cd, Hg, Pb, and Zn showed significant hotspot in urban area. This work conducted a new approach exploration, and practical implications for soil pollution regulation were proposed.
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  • 文章类型: Journal Article
    在这项研究中,引入了一种新颖的方法,将计算机预测与卷积神经网络(CNN)框架合并,以在液相色谱-高分辨率质谱(LC-HRMS)指纹图谱中靶向筛选体内代谢物。最初,三个预测工具,辅以文学,鉴定来自中药(TCM)或功能性食品的目标原型的潜在代谢物。随后,CNN被开发以最小化来自基于CWT的峰值检测的误报。然后使用MS-FINDER在三个置信水平上注释提取的离子色谱(EIC)峰。该方法的重点是分析“陈皮-耳”(PCR-FA)给药大鼠的代谢指纹。因此,阳性模式下的384个峰和阴性模式下的282个峰被鉴定为可能代谢物的真实峰。通过将这些与“空白血清”数据进行对比,选择适当强度的EIC峰用于MS/MS片段分析。最终,14个原型(包括类黄酮和内酯)和40个代谢物精确地连接到它们相应的EIC峰,从而提供更深入的药理学机制。这种创新策略显着增强了LC-HRMS代谢指纹的靶向筛选中的化学覆盖率。
    In this study, a novel approach is introduced, merging in silico prediction with a Convolutional Neural Network (CNN) framework for the targeted screening of in vivo metabolites in Liquid Chromatography-High Resolution Mass Spectrometry (LC-HRMS) fingerprints. Initially, three predictive tools, supplemented by literature, identify potential metabolites for target prototypes derived from Traditional Chinese Medicines (TCMs) or functional foods. Subsequently, a CNN is developed to minimize false positives from CWT-based peak detection. The Extracted Ion Chromatogram (EIC) peaks are then annotated using MS-FINDER across three levels of confidence. This methodology focuses on analyzing the metabolic fingerprints of rats administered with \"Pericarpium Citri Reticulatae - Fructus Aurantii\" (PCR-FA). Consequently, 384 peaks in positive mode and 282 in negative mode were identified as true peaks of probable metabolites. By contrasting these with \"blank serum\" data, EIC peaks of adequate intensity were chosen for MS/MS fragment analysis. Ultimately, 14 prototypes (including flavonoids and lactones) and 40 metabolites were precisely linked to their corresponding EIC peaks, thereby providing deeper insight into the pharmacological mechanism. This innovative strategy markedly enhances the chemical coverage in the targeted screening of LC-HRMS metabolic fingerprints.
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  • 文章类型: Journal Article
    背景:可以利用较新的软件从磁共振成像(MRI)创建合成计算机断层扫描(sCT)。作为常规CT(rCT)的可能替代方案,尚待探索。在这项研究中,在尸体上获得rCT扫描和MRI衍生的sCT扫描。比较2次扫描进行形态测量分析。ExcelsiusGPS机器人用于放置具有rCT和sCT图像的腰骶螺钉。
    方法:总共,放置了14个螺钉。所有螺钉均为Gertzbein-Robbins量表上的A级。在重建的软件模型上,rCT和sCT之间的平均表面距离差为-0.02±0.05mm,平均绝对表面距离为0.24±0.05mm,放射性密度的平均绝对误差为92.88±10.53HU。sCT与rCT的总平均尖端距离为1.74±1.1对2.36±1.6mm(p=0.24);sCT与rCT的平均尾部距离为1.93±0.88对2.81±1.03mm(p=0.07);sCT与rCT的平均角度偏差为3.2°±2.05°对4.04°±2.71°(p=0.53)。
    结论:在尸体研究中,基于MRI的sCT在形态测量分析和机器人辅助的腰骶螺钉置入方面均产生了与rCT相当的结果。
    BACKGROUND: Synthetic computed tomography (sCT) can be created from magnetic resonance imaging (MRI) utilizing newer software. sCT is yet to be explored as a possible alternative to routine CT (rCT). In this study, rCT scans and MRI-derived sCT scans were obtained on a cadaver. Morphometric analysis was performed comparing the 2 scans. The ExcelsiusGPS robot was used to place lumbosacral screws with both rCT and sCT images.
    METHODS: In total, 14 screws were placed. All screws were grade A on the Gertzbein-Robbins scale. The mean surface distance difference between rCT and sCT on a reconstructed software model was -0.02 ± 0.05 mm, the mean absolute surface distance was 0.24 ± 0.05 mm, and the mean absolute error of radiodensity was 92.88 ± 10.53 HU. The overall mean tip distance for the sCT versus rCT was 1.74 ± 1.1 versus 2.36 ± 1.6 mm (p = 0.24); mean tail distance for the sCT versus rCT was 1.93 ± 0.88 versus 2.81 ± 1.03 mm (p = 0.07); and mean angular deviation for the sCT versus rCT was 3.2° ± 2.05° versus 4.04°± 2.71° (p = 0.53).
    CONCLUSIONS: MRI-based sCT yielded results comparable to those of rCT in both morphometric analysis and robot-assisted lumbosacral screw placement in a cadaver study.
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  • 文章类型: Journal Article
    与传统的机器学习方法相比,本研究检查了使用基于深度学习的模型的主动学习辅助系统评论的性能。并探讨了模型转换策略的潜在好处。
    由四个部分组成,研究:1)分析主动学习辅助系统综述的性能和稳定性;2)实现卷积神经网络分类器;3)比较分类器和特征提取器的性能;4)研究模型切换策略对综述性能的影响。
    打火机模型在早期模拟阶段表现良好,而其他型号在后期显示出更高的性能。与单独使用默认分类模型相比,模型切换策略通常会提高性能。
    研究结果支持在基于主动学习的系统综述工作流程中使用模型转换策略。建议以轻型模型开始审查,如朴素贝叶斯或逻辑回归,并在需要时基于启发式规则切换到较重的分类模型。
    UNASSIGNED: This study examines the performance of active learning-aided systematic reviews using a deep learning-based model compared to traditional machine learning approaches, and explores the potential benefits of model-switching strategies.
    UNASSIGNED: Comprising four parts, the study: 1) analyzes the performance and stability of active learning-aided systematic review; 2) implements a convolutional neural network classifier; 3) compares classifier and feature extractor performance; and 4) investigates the impact of model-switching strategies on review performance.
    UNASSIGNED: Lighter models perform well in early simulation stages, while other models show increased performance in later stages. Model-switching strategies generally improve performance compared to using the default classification model alone.
    UNASSIGNED: The study\'s findings support the use of model-switching strategies in active learning-based systematic review workflows. It is advised to begin the review with a light model, such as Naïve Bayes or logistic regression, and switch to a heavier classification model based on a heuristic rule when needed.
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  • 文章类型: English Abstract
    在中国医药行业数字化转型中,如何高效地对工业数据进行治理和分析,挖掘其中蕴含的有价值的信息,指导药品生产一直是研究热点和应用难点。一般来说,中国制药技术相对广泛,药品质量的一致性有待提高。为了解决这个问题,我们提出了一种结合高级计算工具的优化方法(例如,贝叶斯网络,卷积神经网络,和Pareto多目标优化算法)与精益六西格玛工具(例如,休哈特控制图和过程性能指标),深入挖掘历史工业数据,指导制药工艺持续改进。Further,我们采用该策略优化了除孢子粒灵芝孢子粉的生产工艺。优化后,我们初步获得了关键参数的可能区间组合,以确保包括水分在内的关键质量属性的P_(pk)值,细度,粗多糖,除孢子粒灵芝孢子粉的总三萜不少于1.33。结果表明,该策略具有一定的工业应用价值。
    In the digital transformation of Chinese pharmaceutical industry, how to efficiently govern and analyze industrial data and excavate the valuable information contained therein to guide the production of drug products has always been a research hotspot and application difficulty. Generally, the Chinese pharmaceutical technique is relatively extensive, and the consistency of drug quality needs to be improved. To address this problem, we proposed an optimization method combining advanced calculation tools(e.g., Bayesian network, convolutional neural network, and Pareto multi-objective optimization algorithm) with lean six sigma tools(e.g., Shewhart control chart and process performance index) to dig deeply into historical industrial data and guide the continuous improvement of pharmaceutical processes. Further, we employed this strategy to optimize the manufacturing process of sporoderm-removal Ganoderma lucidum spore powder. After optimization, we preliminarily obtained the possible interval combination of critical parameters to ensure the P_(pk) values of the critical quality properties including moisture, fineness, crude polysaccharide, and total triterpenes of the sporoderm-removal G. lucidum spore powder to be no less than 1.33. The results indicate that the proposed strategy has an industrial application value.
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  • 文章类型: Journal Article
    生态修复工程的发展不尽如人意,在生态恢复地区,水土流失仍然是一个问题。传统的土壤侵蚀研究大多基于卫星遥感数据和传统的土壤侵蚀模型,这不能准确描述生态恢复区(主要是人工林)的土壤侵蚀状况。本文以高分辨率无人机影像为基础数据,这可以提高研究的准确性。考虑到传统的土壤侵蚀模型不能准确表达侵蚀因子之间的复杂关系,本文应用卷积神经网络(CNN)模型对生态修复区的土壤侵蚀强度进行识别,可以解决土壤侵蚀的非线性映射问题。在这个研究领域,与传统方法相比,应用CNN模型的土壤侵蚀识别精度提高了25.57%,比基线方法更好。此外,根据研究成果,本文分析了土地利用类型之间的关系,植被覆盖,坡度和土壤侵蚀。本研究对生态修复区水土流失防治提出了五点建议,为后续生态修复决策提供科学依据和决策参考。
    The development of ecological restoration projects is unsatisfactory, and soil erosion is still a problem in ecologically restored areas. Traditional soil erosion studies are mostly based on satellite remote sensing data and traditional soil erosion models, which cannot accurately characterize the soil erosion conditions in ecological restoration areas (mainly plantation forests). This paper uses high-resolution unmanned aerial vehicle (UAV) images as the base data, which could improve the accuracy of the study. Considering that traditional soil erosion models cannot accurately express the complex relationships between erosion factors, this paper applies convolutional neural network (CNN) models to identify the soil erosion intensity in ecological restoration areas, which can solve the problem of nonlinear mapping of soil erosion. In this study area, compared with the traditional method, the accuracy of soil erosion identification by applying the CNN model improved by 25.57%, which is better than baseline methods. In addition, based on research results, this paper analyses the relationship between land use type, vegetation cover, and slope and soil erosion. This study makes five recommendations for the prevention and control of soil erosion in the ecological restoration area, which provides a scientific basis and decision reference for subsequent ecological restoration decisions.
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  • 文章类型: Journal Article
    城市地区的形成和人口稠密地区的吸引力反映了一种空间平衡,即工人迁移到城市活力更强但环境质量下降的地方。然而,大流行和相关的健康问题加速了远程和混合工作模式,改变了人们的位置感和对城市密度的欣赏,并改变了人们对理想生活和工作场所的看法。本研究提供了一种系统的方法,用于通过分析大流行后的城市居住偏好来评估感知的城市环境质量与城市便利设施之间的权衡。通过评估邻里街景图像(SVI)和城市舒适度数据,比如公园的大小,该研究从对两种工作条件(办公室工作或在家工作)的调查中收集主观意见。在此基础上,训练了几个机器学习(ML)模型来预测两种工作模式的偏好得分。鉴于在家工作偏好的复杂性,结果表明,该方法预测办公室工作分数具有更高的精度。在后大流行时代,这项研究旨在阐明开发一种有价值的工具,用于根据指定社区工作生活模式和社会概况的潜在自我组织来驱动和评估城市设计策略。
    The formation of urban districts and the appeal of densely populated areas reflect a spatial equilibrium in which workers migrate to locations with greater urban vitality but diminished environmental qualities. However, the pandemic and associated health concerns have accelerated remote and hybrid work modes, altered people\'s sense of place and appreciation of urban density, and transformed perceptions of desirable places to live and work. This study presents a systematic method for evaluating the trade-offs between perceived urban environmental qualities and urban amenities by analysing post-pandemic urban residence preferences. By evaluating neighbourhood Street View Imagery (SVI) and urban amenity data, such as park sizes, the study collects subjective opinions from surveys on two working conditions (work-from-office or from-home). On this basis, several Machine Learning (ML) models were trained to predict the preference scores for both work modes. In light of the complexity of work-from-home preferences, the results demonstrate that the method predicts work-from-office scores with greater precision. In the post-pandemic era, the research aims to shed light on the development of a valuable instrument for driving and evaluating urban design strategies based on the potential self-organisation of work-life patterns and social profiles in designated neighbourhoods.
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  • 文章类型: Journal Article
    2019年冠状病毒病(COVID-19)导致严重急性呼吸道综合症-冠状病毒-2(SARS-CoV-2),并为诊断和治疗研究打开了几个挑战。胸部X射线和计算机断层扫描(CT)扫描是检测和评估COVID在疾病不同阶段对肺部造成的损害的有效且快速的替代方法。虽然CT扫描是准确的检查,由于便宜,胸部X光检查仍然有帮助,更快,较低的辐射暴露,并在低输入国家提供。基于人工智能(AI)和计算机视觉的计算机辅助诊断系统是从X射线图像中提取特征的替代方案,提供准确的COVID-19诊断。然而,专业和昂贵的计算资源给人的印象是具有挑战性的。此外,我们需要更好地理解低成本设备和智能手机如何支持人工智能模型来及时预测疾病。甚至使用深度学习来支持基于图像的医疗诊断,一旦已知技术在高性能服务器上使用集中式智能,仍然需要解决挑战,使得将这些模型嵌入到低成本设备中变得困难。本文通过提出人工智能即服务架构(AIaaS)来阐明这些问题,混合AI支持操作,集中式和分布式,目的是在低成本设备或智能手机上嵌入已经训练好的模型。通过使用低成本设备进行COVID-19诊断的案例研究,我们证明了我们的架构的适用性。在本文的主要研究结果中,我们指出了低成本设备的性能评估,以及时准确地处理COVID-19预测任务,以及CNN模型在低成本设备上的定量性能评估。
    Coronavirus Disease-2019 (COVID-19) causes Severe Acute Respiratory Syndrome-Corona Virus-2 (SARS-CoV-2) and has opened several challenges for research concerning diagnosis and treatment. Chest X-rays and computed tomography (CT) scans are effective and fast alternatives to detect and assess the damage that COVID causes to the lungs at different stages of the disease. Although the CT scan is an accurate exam, the chest X-ray is still helpful due to the cheaper, faster, lower radiation exposure, and is available in low-incoming countries. Computer-aided diagnostic systems based on Artificial Intelligence (AI) and computer vision are an alternative to extract features from X-ray images, providing an accurate COVID-19 diagnosis. However, specialized and expensive computational resources come across as challenging. Also, it needs to be better understood how low-cost devices and smartphones can hold AI models to predict diseases timely. Even using deep learning to support image-based medical diagnosis, challenges still need to be addressed once the known techniques use centralized intelligence on high-performance servers, making it difficult to embed these models in low-cost devices. This paper sheds light on these questions by proposing the Artificial Intelligence as a Service Architecture (AIaaS), a hybrid AI support operation, both centralized and distributed, with the purpose of enabling the embedding of already-trained models on low-cost devices or smartphones. We demonstrated the suitability of our architecture through a case study of COVID-19 diagnosis using a low-cost device. Among the main findings of this paper, we point out the performance evaluation of low-cost devices to handle COVID-19 predicting tasks timely and accurately and the quantitative performance evaluation of CNN models embodiment on low-cost devices.
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  • 文章类型: Journal Article
    在目前的贡献中,提出了一种基于多变量曲线分辨率和深度学习(DL)的新方法,用于定量质谱成像(MSI),作为识别不同化合物并在生物组织中创建其分布图而无需样品制备的有效技术。作为一个案例研究,使用基质辅助激光解吸电离MSI(MALDI-MSI)在小鼠肝脏中定量测定了十氯酮作为致癌农药。为此,使用卷积神经网络(CNN)分析了7个含有0至20皮摩尔十氯酮的标准点和4个未知组织的数据,这些组织来自感染十氯酮1、5和10天的小鼠肝脏。为了解决CNN模型训练缺乏足够数据的问题,每个像素被视为一个样本,设计的CNN模型是通过训练集中的像素来训练的,通过多元曲线分辨率-交替最小二乘法(MCR-ALS)获得相应的十氯酮含量。然后使用测试集中的校准像素在1、5和10天的暴露中对训练的模型进行外部评估。分别。所有三个数据集的预测R2范围为0.93至0.96,优于支持向量机(SVM)和偏最小二乘(PLS)。经过训练的CNN模型最终用于预测小鼠肝脏组织中的十氯酮含量,并将其结果与MALDI-MSI和GC-MS方法进行了比较,这是可比的。结果检验证实了所提出方法的有效性。
    In the present contribution, a novel approach based on multivariate curve resolution and deep learning (DL) is proposed for quantitative mass spectrometry imaging (MSI) as a potent technique for identifying different compounds and creating their distribution maps in biological tissues without need for sample preparation. As a case study, chlordecone as a carcinogenic pesticide was quantitatively determined in mouse liver using matrix-assisted laser desorption ionization-MSI (MALDI-MSI). For this purpose, data from seven standard spots containing 0 to 20 picomoles of chlordecone and four unknown tissues from the mouse livers infected with chlordecone for 1, 5, and 10 days were analyzed using a convolutional neural network (CNN). To solve the lack of sufficient data for CNN model training, each pixel was considered as a sample, the designed CNN models were trained by pixels in training sets, and their corresponding amounts of chlordecone were obtained by multivariate curve resolution-alternating least-squares (MCR-ALS). The trained models were then externally evaluated using calibration pixels in test sets for 1, 5, and 10 days of exposure, respectively. Prediction R2 for all three data sets ranged from 0.93 to 0.96, which was superior to support vector machine (SVM) and partial least-squares (PLS). The trained CNN models were finally used to predict the amount of chlordecone in mouse liver tissues, and their results were compared with MALDI-MSI and GC-MS methods, which were comparable. Inspection of the results confirmed the validity of the proposed method.
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  • 文章类型: Journal Article
    对能量的预测,光伏太阳能发电厂的主动生产在多云天气或太阳能发电厂上空有云层的情况下是一个挑战;因此,它对电力系统的规划有影响,特别是在季节分析和预测精度调整方面,例如在假期。2022年,一些作者发表了一些与水平比重计相关的分析和数据评估中的限制,日太阳平均辐射的平均偏差误差(MIEave)范围从0.17%到2.86%与天气的突然变化有关,它增加了“错误估计潜在发电量的风险”,短期误差超过50%,全球水平辐照度(GHI)的平均偏差误差(MBE)至少为±8%[1]。在这篇研究文章中,通过使用两种方法,将卫星与气象站数据和与新的季节性分析相关的统计模型相结合,用于短期预报:i)NeuralProphet,岭回归,ii)卷积神经网络的长短期记忆。此外,它需要三个KPI作为反馈,它是平均绝对误差(MAE),相对均方根误差(RMSE),和平均绝对百分比误差(MAPE)。结果表明,MAPE为5.93%,计算时间为852.10s,并与2019年至2021年的新预测方法进行了比较。本研究文章说明了在秘鲁光伏太阳能发电厂的情况下预测方法的新方法,并证明了鲁棒性和季节性结果,以及与外部影响相关的新的短期改进,如多云条件和资源可用性。我们的发现是MAPE模型的改进12.14%-5.93%;即使与文献和目前的ARIMA-LSTM模型相比,也有10.57%,带NN和G的LSTM,SARIMA和SVM考虑了8.14%的高斯白噪声和8.81%的Prophet支持向量机。
    Prediction of the energy, active production from the PV solar plant is a challenge in cloudy weather or with clouds over the solar plant; therefore, it has impact in the planning of the power system, especially in the season analysis and prediction accuracy adjustments, for example in holidays. In 2022, some authors published some analysis associated to horizontal pyranometers and the limits in the evaluation of the data, the Mean Bias Error of Daily Solar Irradiation average (MIEave) ranges from 0.17% to 2.86% associated a sudden change in the weather, it increases the \"risk of misestimating the potential electricity generation\" with short-term error of more than 50% and the Global Horizontal Irradiance (GHI) has a mean bias error (MBE) of at least ±8% [1]. In this research article, a novel proposal for short-term forecasting combines the satellite with meteorological station data and statistical model associated to the new seasonality analysis by using two approaches: i) NeuralProphet, Ridge regression, ii) Long Short-Term Memory with convolutional neural networks. Besides, it requires three KPI as feedback, it is the mean absolute error (MAE), relative Root mean square error (RMSE), and mean absolute percentage error (MAPE). The results demonstrate a MAPE of 5.93% and a computational time 852.10 s and the comparison with new predictions methods from 2019 to 2021. This research article illustrates the new approach with the forecasting method in a case of the PV solar plant in Peru and proves the robustness and seasonality results, and new short-terms improvements associated to external influence as cloudy conditions and resource availability. Our findings are an improvement of the model MAPE 12.14%-5.93%; even compared with the literature and currently models as ARIMA-LSTM with 10.57%, LSTM with NN and G, SARIMA and SVM considering Gaussian White Noise with 8.14% and Prophet with SVM with 8.81%.
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