Colony Count, Microbial

殖民地伯爵,微生物
  • 文章类型: Journal Article
    背景:一些国家出于成本效益的目的已经实施了腹腔镜器械的重复使用。作为再处理的第一步的精确清洁将导致有效的灭菌。目的评价清洁指南实施对腹腔镜胆囊切除术中腹腔镜器械微生物负荷的影响。
    方法:本实验研究在某教育医院进行,2017年,从胆囊切除术中随机选择128台腹腔镜器械,并分为两个清洗组。在两组常规清洁和根据指南清洁中检查仪器的数量(菌落形成单位[CFU]/mL)和微生物类型。该指南是本地的,取自医疗器械促进协会(AAMI)在这种情况下的成功指导。采用SPSS19版进行相应的统计分析。
    结果:临床使用后平均微生物负荷为2.4×106CFU/100mL。对照组降至7.2×105CFU/100mL,干预组降至3.4×104CFU/100mL,清洗过程后。临床使用后立即分离出的最常见的微生物是大肠杆菌81.2%,假单胞菌68.8%,克雷伯菌属57.8%,还有spp.,等等。
    结论:AAMI清洗方法建议手术室护士使用腹腔镜器械。
    BACKGROUND: Some countries have implemented reuse of laparoscopic instruments for cost-effective purposes. An accurate cleaning as the first step of reprocessing would lead to the effective sterilization. The purpose was to evaluate the effect of cleaning guidelines implementation on microbial load of laparoscopic instruments which were used in laparoscopic cholecystectomy surgery.
    METHODS: This experimental study was done in an educational hospital, in 2017 and included a total of 128 laparoscopic instruments randomly selected from cholecystectomy surgeries and divided into two cleaning groups. The instruments were checked out in terms of number (colony-forming units [CFU]/mL) and type of microorganisms in two groups of routine cleaning and according to guideline cleaning. This guideline was indigenous and taken from successful instruction in this context that was presented by the Association for the Advancement of Medical Instrumentation (AAMI). The appropriate statistical analysis was conducted by SPSS version 19.
    RESULTS: The average microbial load was 2.4 × 106 CFU/100 mL after clinical use. It was reduced to 7.2 × 105 CFU/100 mL in the control group and 3.4 × 104 CFU/100 mL in the intervention group, after the cleaning process. The most common microorganisms that were isolated immediately after clinical use were Escherichia coli 81.2%, Pseudomonas 68.8%, Klebsiella 57.8%, and spp., and so on.
    CONCLUSIONS: The AAMI cleaning method is recommended to be utilized by operating room nurses for laparoscopic instruments.
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  • 文章类型: Journal Article
    尿路感染(UTI)在一生中非常常见,占临床微生物学实验室工作量的大部分。实验室技术人员对尿液培养物的解释的明确说明对于获得标准化是必不可少的,可靠,和临床上有用的结果。在文学中,在实验室处理尿液样本时,通常缺乏循证实践。在这份协商一致文件中,BILULU研究组提出了在微生物学实验室中实施现有尿液培养指南的实用方法,并为指南中没有明确解决方案的问题提供了答案.
    Urinary tract infections (UTI) are very common throughout life and account for the majority of the workload in the clinical microbiology laboratory. Clear instructions for the interpretation of urine cultures by the laboratory technicians are indispensable to obtain standardized, reliable, and clinically useful results. In literature, there is often a lack of evidence-based practice in processing urinary samples in the laboratory. In this consensus document, the BILULU Study Group presents a practical approach for the implementation of existing guidelines for the culture of urine in the microbiology laboratory and offers answers for issues where no clear solution is available in the guidelines.
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  • 文章类型: Journal Article
    OBJECTIVE: Bacteria adherent to long-term urinary catheters (LTUC) may give misleading urine culture results. Guidelines in the USA recommend changing LTUC before urine collection to diagnose UTI and before commencing appropriate antimicrobial treatment. However, in the UK there is no such guidance. In this study, we evaluated differences in urine cultures before and after changing LTUC.
    METHODS: In a prospective study in a UK urology department, we made a quantitative and qualitative comparison between paired urines collected before and after catheter change in patients with LTUC. We measured culture growth on a four-point ordinal scale as nil, scanty (< 107 cfu/L), moderate (107-108 cfu/L) or heavy (> 108 cfu/L) and recorded the range of bacterial species isolated. Statistical analysis was by Wilcoxon matched-pairs test.
    RESULTS: Sixty-six patients (55 males, 11 females) took part in the study. Urines with no growth increased from 7/66 (11%) before change of catheter to 21/66(32%) after change of catheter. Cultures reported as heavy growth (> 108 cfu/L) reduced from 48/66 (73%) to 25/66 (38%) after catheter change (p < 0.001). Except for Pseudomonas spp., other organisms were isolated less frequently after catheter change. No Proteus spp. was isolated after catheter change.
    CONCLUSIONS: This study confirms that failure to change long-term catheters before collecting urine for culture may give misleading results. In the interest of accurate diagnosis and antimicrobial stewardship, UK guidelines should recommend changing long-term urinary catheters before collection of urine for culture.
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  • 文章类型: Journal Article
    美国食品和药物管理局要求食品加工商实施和验证过程,以最大程度地减少或防止食品生产中可合理预见的危害的发生。在鲜切叶类蔬菜的生产过程中,当产品被洗涤时,可能存在于产品上的微生物污染会扩散到整个生产批次,从而增加了患病的风险。在洗涤水中使用抗微生物剂是防止这种水介导的交叉污染的关键步骤;然而,许多因素会影响鲜切叶类蔬菜生产中的抗菌效果,验证这一关键预防控制的程序尚未明确。生产者可以考虑三种方法来验证抗菌洗涤作为交叉污染的预防性控制。备选方案1涉及使用微生物危害的替代品,并证明抗菌洗涤可以防止交叉污染。选项2涉及使用抗菌传感器和证明在最坏情况的操作条件下维持临界抗菌水平。选项3验证传感器在处理设备中的放置,并证明在所有位置都保持临界抗菌水平,不管操作条件。为鲜切叶类蔬菜开发的这些验证选项可以作为验证过程的示例,这些过程可以防止在洗涤其他新鲜农产品商品期间的交叉污染。
    The U.S. Food and Drug Administration requires food processors to implement and validate processes that will result in significantly minimizing or preventing the occurrence of hazards that are reasonably foreseeable in food production. During production of fresh-cut leafy vegetables, microbial contamination that may be present on the product can spread throughout the production batch when the product is washed, thus increasing the risk of illnesses. The use of antimicrobials in the wash water is a critical step in preventing such water-mediated cross-contamination; however, many factors can affect antimicrobial efficacy in the production of fresh-cut leafy vegetables, and the procedures for validating this key preventive control have not been articulated. Producers may consider three options for validating antimicrobial washing as a preventive control for cross-contamination. Option 1 involves the use of a surrogate for the microbial hazard and the demonstration that cross-contamination is prevented by the antimicrobial wash. Option 2 involves the use of antimicrobial sensors and the demonstration that a critical antimicrobial level is maintained during worst-case operating conditions. Option 3 validates the placement of the sensors in the processing equipment with the demonstration that a critical antimicrobial level is maintained at all locations, regardless of operating conditions. These validation options developed for fresh-cut leafy vegetables may serve as examples for validating processes that prevent cross-contamination during washing of other fresh produce commodities.
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  • 文章类型: Journal Article
    BacT/ALERT微生物检测系统(bioMerieux,Inc,达勒姆,NC)在许多血液中心常规用作血小板收集的释放前测试。已发布的报告记录了实践和结果的广泛差异。对英文文献进行了系统的审查,以描述评估BacT/ALERT培养系统对血小板收集物的使用的出版物,作为超过10000种血小板成分的常规筛选测试。16种出版物报道了使用验证性测试来证实最初的阳性培养结果,但使用不同的命名法来对结果进行分类。可能影响结果的分析前和分析变量在中心之间差异很大。协议细节的不完整描述使站点之间的比较变得复杂。最初的阳性培养结果为539至10606/百万(0.054%-1.061%),确认为阳性的捐赠为127至1035/百万(0.013%-0.104%)。由过时的培养物确定的假阴性结果为662至2173/百万(0.066%-0.217%),而败血症反应为0至66/百万(0%-0.007%)。当前的培养方案代表了在优化分析灵敏度和确保及时获得临床需要的血小板之间的实际妥协。对协议变化对结果的影响的见解通常仅限于随时间对其协议进行有限更改的各个站点。血小板制造商应根据不断增长的国际经验重新评估其BacT/ALERT筛查方案的充分性,并在报告结果时提供可能影响培养结果的所有变量的详细文档。我们提出了一个标准化命名法的框架,用于报告BacT/ALERT筛查的结果。
    The BacT/ALERT microbial detection system (bioMerieux, Inc, Durham, NC) is in routine use in many blood centers as a prerelease test for platelet collections. Published reports document wide variation in practices and outcomes. A systematic review of the English literature was performed to describe publications assessing the use of the BacT/ALERT culture system on platelet collections as a routine screen test of more than 10000 platelet components. Sixteen publications report the use of confirmatory testing to substantiate initial positive culture results but use varying nomenclature to classify the results. Preanalytical and analytical variables that may affect the outcomes differ widely between centers. Incomplete description of protocol details complicates comparison between sites. Initial positive culture results range from 539 to 10606 per million (0.054%-1.061%) and confirmed positive from 127 to 1035 per million (0.013%-0.104%) donations. False-negative results determined by outdate culture range from 662 to 2173 per million (0.066%-0.217%) and by septic reactions from 0 to 66 per million (0%-0.007%) collections. Current culture protocols represent pragmatic compromises between optimizing analytical sensitivity and ensuring the timely availability of platelets for clinical needs. Insights into the effect of protocol variations on outcomes are generally restricted to individual sites that implement limited changes to their protocols over time. Platelet manufacturers should reassess the adequacy of their BacT/ALERT screening protocols in light of the growing international experience and provide detailed documentation of all variables that may affect culture outcomes when reporting results. We propose a framework for a standardized nomenclature for reporting of the results of BacT/ALERT screening.
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  • 文章类型: Journal Article
    目的:本研究的目的是确定我们机构的社区获得性肺炎(CAP)儿科患者菌血症的患病率,并测试新制定的血培养指南的有效性。
    方法:使用最新文献和当地专家意见,制定了获得CAP儿科患者血培养的机构指南.对2010年1月至2011年6月在急诊科接受治疗或因CAP入院的儿童进行回顾性图表审查。收集人口统计学和临床数据,包括血培养结果.Chi2检验评估与菌血症相关的变量,是否获得了血液培养物,以及根据我们的指导方针,获得文化的决定是否合适。
    结果:该研究包括330名患者;在我们的患者人群中获得了155(47%)个血培养。五种文化是真正积极的发现,使得血培养患者的菌血症患病率为3.2%,所有患者的菌血症患病率为1.5%。根据我们的指南,所有5个真阳性结果均符合血液培养标准。回顾性地应用我们的指南,在55%的病例中,获得血培养的决定符合标准。双变量分析表明,从急诊科出院的患者比入院的患者具有更高的指南适宜性决策率。影像学检查结果与做出有关血液培养的指南适当决定有关。
    结论:制定限制儿童CAP患者血培养频率的地方指南可能会捕获任何菌血症患者。这项研究表明,在所有因CAP入院的患者中,可能不需要常规进行血液培养。
    OBJECTIVE: The goal of this study was to determine the prevalence of bacteremia in pediatric patients with community-acquired pneumonia (CAP) at our institution and to test the effectiveness of newly developed guidelines for obtaining blood cultures.
    METHODS: Using recent literature and local expert opinion, institutional guidelines for obtaining blood cultures in pediatric patients with CAP were developed. A retrospective chart review of children treated in the emergency department or admitted for CAP from January 2010 through June 2011 was conducted. Demographic and clinical data were collected, including results of blood cultures. Chi2 tests assessed for variables associated with bacteremia, whether a blood culture was obtained, and if the decision to obtain a culture was appropriate based on our guidelines.
    RESULTS: The study included 330 patients; 155 (47%) blood cultures were obtained in our patient population. Five cultures were true-positive findings, making the prevalence of bacteremia 3.2% in patients with blood cultures and 1.5% in all patients. All 5 true positive results met criteria for blood culture based on our guidelines. Applying our guidelines retrospectively, the decision to obtain a blood culture met criteria in 55% of the cases. Bivariate analysis showed that patients discharged from the emergency department had higher rates of guideline-appropriate decisions than patients admitted. Radiographic findings were associated with making a guideline-appropriate decision regarding blood culture.
    CONCLUSIONS: Instituting local guidelines that limit the frequency of obtaining blood cultures in pediatric patients with CAP is likely to capture any patient with bacteremia. This study suggests that blood cultures may not need to be routinely obtained in all patients admitted to the hospital with CAP.
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  • 文章类型: Evaluation Study
    Three previously described methods for culture of Clostridium difficile from meats were evaluated by microbiologists with experience in C. difficile culture and identification. A consensus protocol using BHI broth enrichment followed by ethanol shock and plating to selective and non-selective media was selected for use, and all participating laboratories received hands-on training in the use of this method prior to study initiation. Retail meat products (N = 1755) were cultured for C. difficile over 12 months during 2010-2011 at 9 U.S. FoodNet sites. No C. difficile was recovered, although other clostridia were isolated.
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  • 文章类型: Journal Article
    背景:AphA是弧菌中在低细胞密度下运行的主群体感应(QS)调节剂。已在哈氏弧菌和霍乱弧菌中表征了AphA对靶基因的分子调控。但在副溶血性弧菌中仍然知之甚少。
    结果:AphA蛋白在副溶血性弧菌中极为保守,弧菌sp.Ex25,Vibriosp.EJY3,V.harveyi,五、创伤,五、脾,V.anguillarum,V.霍乱弧菌,和V.furnissii。上述9个AphA直向同源物似乎识别保守的顺式作用DNA信号,这些信号可以由两个共有构建体代表。一个20bp的盒序列和一个位置频率矩阵。V.副溶血性AphA抑制ahpA的转录,qrr4和opaR通过直接AphA-靶启动子DNA缔合,同时以间接方式抑制qrr2-3转录。翻译和转录开始,sigma因子识别的核心启动子元件,用于核糖体识别的Shine-Dalgarno序列,和AphA结合位点(含有相应的AphA盒样序列)确定了三个直接的AphA靶ahpA,副溶血性弧菌的qrr4和opaR。
    结论:AphA介导的对ahpA的抑制,qrr2-4和opaR在副溶血性弧菌中通过多种生化和分子实验进行了表征。计算启动子分析表明QS调节因子编码基因ahpA转录调控的保守机制,弧菌中的qrr4和opaR。
    BACKGROUND: AphA is the master quorum-sensing (QS) regulator operating at low cell density in vibrios. Molecular regulation of target genes by AphA has been characterized in Vibrio harveyi and V. cholerae, but it is still poorly understood in V. parahaemolyticus.
    RESULTS: The AphA proteins are extremely conserved in V. parahaemolyticus, Vibrio sp. Ex25, Vibrio sp. EJY3, V. harveyi, V. vulnificus, V. splendidus, V. anguillarum, V. cholerae, and V. furnissii. The above nine AphA orthologs appear to recognize conserved cis-acting DNA signals which can be represented by two consensus constructs, a 20 bp box sequence and a position frequency matrix. V. parahaemolyticus AphA represses the transcription of ahpA, qrr4, and opaR through direct AphA-target promoter DNA association, while it inhibits the qrr2-3 transcription in an indirect manner. Translation and transcription starts, core promoter elements for sigma factor recognition, Shine-Dalgarno sequences for ribosome recognition, and AphA-binding sites (containing corresponding AphA box-like sequences) were determined for the three direct AphA targets ahpA, qrr4, and opaR in V. parahaemolyticus.
    CONCLUSIONS: AphA-mediated repression of ahpA, qrr2-4, and opaR was characterized in V. parahaemolyticus by using multiple biochemical and molecular experiments. The computational promoter analysis indicated the conserved mechanism of transcriptional regulation of QS regulator-encoding genes ahpA, qrr4, and opaR in vibrios.
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    文章类型: Journal Article
    B组链球菌是美国早发性新生儿败血症的主要原因。建议对妊娠35至37周的孕妇进行普遍筛查。疾病控制和预防中心最近更新了预防早发性新生儿B组链球菌疾病的指南。新指南包含六个重要的变化。首先,建议考虑使用敏感的核酸扩增测试,而不仅仅是常规文化,用于检测直肠和阴道标本中的B组链球菌。第二,考虑尿液样本阳性所需的菌落计数至少为104个菌落形成单位/mL.第三,新指南提出了管理早产和早产胎膜早破的单独算法,而不是两种条件的单一算法。第四,用于产时化学预防的青霉素G的推荐剂量有微小变化.第五,该指南为青霉素过敏女性的抗生素治疗方案提供了新的建议.头孢唑啉建议用于轻微过敏的女性。对于那些有严重过敏反应风险的人,如果生物体是易感的[纠正],推荐克林霉素和万古霉素,如果有克林霉素耐药性或如果敏感性未知。[更正]。最后,新生儿早期B组链球菌病二级预防的新算法应适用于所有婴儿,不仅仅是那些有感染风险的人。该算法阐明了不同风险类别的婴儿所需的评估程度和观察持续时间。
    Group B streptococcus is the leading cause of early-onset neonatal sepsis in the United States. Universal screening is recommended for pregnant women at 35 to 37 weeks\' gestation. The Centers for Disease Control and Prevention recently updated its guideline for the prevention of early-onset neonatal group B streptococcal disease. The new guideline contains six important changes. First, there is a recommendation to consider using sensitive nucleic acid amplification tests, rather than just routine cultures, for detection of group B streptococcus in rectal and vaginal specimens. Second, the colony count required to consider a urine specimen positive is at least 104 colony-forming units per mL. Third, the new guideline presents separate algorithms for management of preterm labor and preterm premature rupture of membranes, rather than a single algorithm for both conditions. Fourth, there are minor changes in the recommended dose of penicillin G for intrapartum chemoprophylaxis. Fifth, the guideline provides new recommendations about antibiotic regimens for women with penicillin allergy. Cefazolin is recommended for women with minor allergies. For those at serious risk of anaphylaxis, clindamycin is recommended if the organism is susceptible [corrected] and vancomycin is recommended if there is clindamycin resistance or if susceptibility is unknown. [corrected]. Finally, the new algorithm for secondary prevention of early-onset group B streptococcal disease in newborns should be applied to all infants, not only those at high risk of infection. The algorithm clarifies the extent of evaluation and duration of observation required for infants in different risk categories.
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  • 文章类型: Journal Article
    描述了一种方法,用于在市售巴氏灭菌的新鲜包装的kosherdill黄瓜罐子中生长植物乳杆菌发酵剂培养物,以便罐子可用于接种商业规模的黄瓜发酵罐。还描述了一种程序,将乳酸菌从MRS肉汤中的冷冻储存中转移到黄瓜汁和市售的犹太芹菜黄瓜罐子中,以便选定的乳酸菌菌株可以通过犹太认证,用于在犹太认证下运行的加工厂中进行商业发酵。这些实验中使用的植物乳杆菌菌株在20至25°C下在4天内生长至最大细胞数,然后在>10(8)CFU/mL下保持活细胞数2周,因此培养物适合接种发酵罐。培养物瓶生长到最大数量后的冷藏可充分最大程度地减少细胞的死亡,从而可以通过每4个月一次将含有活细菌的盐水无菌转移到新的pH调节瓶中来维持纯培养物。
    结论:本报告描述了一种制备适用于犹太蔬菜发酵的乳酸菌发酵剂培养物的方法。
    A method is described for growth of a Lactobacillus plantarum starter culture in jars of commercially available pasteurized fresh-pack kosher dill cucumbers so that jars can be used to inoculate commercial scale cucumber fermentation tanks. A procedure is also described to transfer lactic acid bacteria from frozen storage in MRS broth into cucumber juice and commercial jars of kosher dill cucumbers so that a selected strain of lactic acid bacteria can be kosher certified for commercial fermentations in processing plants that operate under kosher certification. The strain of L. plantarum used in these experiments grew to maximum cell numbers in 4 d at 20 to 25 °C and then maintained viable cell numbers for 2 wk at >10(8) CFU/mL so the culture was suitable for inoculation of fermentation tanks. Refrigeration of jars of culture after they grow to maximum numbers minimizes die-off of cells sufficiently so that a pure culture can be maintained by aseptically transferring brine containing viable bacteria to a new pH-adjusted jar only once every 4 mo.
    CONCLUSIONS: This report describes a method to prepare a lactic acid bacteria starter culture suitable for kosher vegetable fermentations.
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