Alanine

丙氨酸
  • 文章类型: English Abstract
    目的:确定降低妊娠肝内胆汁淤积症(ICP)相关新生儿和产妇发病率的策略。
    方法:按照GRADE方法评估文献的证据质量,并以PICO格式(患者,干预,比较,结果)和结果先验定义,并根据其重要性进行分类。在PubMed上进行了广泛的书目搜索,科克伦,EMBASE和谷歌学者数据库。评估了证据的质量(高,中度,低,非常低)和(i)强或(ii)弱建议或(iii)没有提出建议。与外部审稿人(Delphi调查)在两轮中对建议进行了审查,以选择共识建议。
    结果:在14个问题中(来自PICO格式之外的12个PICO问题和一个定义问题),工作组和外部审稿人就14人(100%)达成协议。文献的证据水平不足以就两个问题提出建议。ICP的定义为暗示性瘙痒的发生(掌足底,排除鉴别诊断后,夜间)与总胆汁酸水平>10μmol/L或丙氨酸转氨酶水平高于2N相关。在没有鉴别诊断的暗示症状的情况下,建议不要进行额外的生物或超声检查。在有CIP的女性中,建议使用熊去氧胆酸来减轻母体瘙痒的强度(强烈推荐。证据质量适中)并降低总胆汁酸和丙氨酸转氨酶的水平。(强烈推荐。证据质量适中)。S-腺苷蛋氨酸,地塞米松,瓜尔胶或活性炭不应用于减少母体瘙痒的强度(强烈推荐。证据质量低),并且没有足够的数据推荐使用抗组胺药(无推荐。证据质量低)。利福平(弱推荐。证据质量很低)或血浆置换(强烈推荐。证据质量很低)不应用于减少产妇瘙痒和围产期发病率。血清胆汁酸监测建议降低围产期发病率和死亡率(死胎,早产)(低推荐。证据质量低)。证据水平不足以确定胎儿心率或胎儿超声监测是否有助于降低围产期发病率(无推荐)。建议从妊娠36周起胆汁酸水平高于99μmol/L时出生,以降低围产期发病率,特别是死产。当胆汁酸水平高于99μmol/L时,低于100μmol/L时,应告知女性引产可考虑妊娠37周和39周,以降低围产期发病率.(强烈推荐。证据质量低)。在产后,总胆汁酸和丙氨酸转氨酶水平应在处方雌激素-孕激素避孕之前检查并正常化,理想情况下使用低雌激素剂量(瘙痒和细胞溶解复发的风险)(低推荐。证据质量非常低)。
    结论:尽管关于ICP妊娠期胆汁淤积的证据质量仍然很低,法国有强烈的共识,正如我们的德尔福研究所示,关于如何用ICP管理女性。参考一线治疗是熊去氧胆酸。
    OBJECTIVE: To identify strategies for reducing neonatal and maternal morbidity associated with intrahepatic cholestasis pregnancy (ICP).
    METHODS: The quality of evidence of the literature was assessed following the GRADE methodology with questions formulated in the PICO format (Patients, Intervention, Comparison, Outcome) and outcomes defined a priori and classified according to their importance. An extensive bibliographic search was performed on PubMed, Cochrane, EMBASE and Google Scholar databases. The quality of the evidence was assessed (high, moderate, low, very low) and a (i) strong or (ii) weak recommendations or (iii) no recommendation were formulated. The recommendations were reviewed in two rounds with external reviewers (Delphi survey) to select the consensus recommendations.
    RESULTS: Of the 14 questions (from 12 PICO questions and one definition question outside the PICO format), there was agreement between the working group and the external reviewers on 14 (100%). The level of evidence of the literature was insufficient to provide a recommendation on two questions. ICP is defined by the occurrence of suggestive pruritus (palmoplantar, nocturnal) associated with a total bile acid level>10μmol/L or an alanine transaminase level above 2N after ruling out differential diagnoses. In the absence of suggestive symptoms of a differential diagnosis, it is recommended not to carry out additional biological or ultrasound tests. In women with CIP, ursodeoxycholic acid is recommended to reduce the intensity of maternal pruritus (Strong recommendation. Quality of the evidence moderate) and to decrease the level of total bile acids and alanine transaminases. (Strong recommendation. Quality of the evidence moderate). S-adenosyl-methionine, dexamethasone, guar gum or activated charcoal should not be used to reduce the intensity of maternal pruritus (Strong recommendation. Quality of evidence low), and there is insufficient data to recommend the use of antihistamines (No recommendation. Quality of evidence low). Rifampicin (Weak recommendation. Very low quality of evidence) or plasma exchange (Strong recommendation. Very low quality of evidence) should not be used to reduce maternal pruritus and perinatal morbidity. Serum monitoring of bile acids is recommended to reduce perinatal morbidity and mortality (stillbirth, prematurity) (Low recommendation. Quality of the evidence low). The level of evidence is insufficient to determine whether fetal heart rate or fetal ultrasound monitoring are useful to reduce perinatal morbidity (No recommendation). Birth is recommended when bile acid level is above 99μmol/L from 36 weeks gestation to reduce perinatal morbidity, in particular stillbirth. When bile acid level is above 99μmol/L is below 100μmol/L, women should be informed that induction of labor could be considered 37 and 39 weeks gestation to reduce perinatal morbidity. (Strong recommendation. Quality of evidence low). In postpartum, total bile acids and alanine transaminases level should be checked and normalized before prescribing estrogen-progestin contraception, ideally with a low estrogen dose (risk of recurrence of pruritus and cytolysis) (Low recommendation. Quality of evidence very low).
    CONCLUSIONS: Although the quality of evidence regarding ICP gestational cholestasis remains low, there is a strong consensus in France, as shown by our Delphi study, on how to manage women with ICP. The reference first-line treatment is ursodeoxycholic acid.
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  • 文章类型: Clinical Trial, Phase III
    目的:Molnupiravir是一种较新的口服抗病毒药物,最近在美国获得了紧急使用授权(EUA),英国和印度。我们的目标是对我们以前的系统评价进行更新,为COVID-19患者使用莫努比拉韦提供实用的临床指南。
    方法:我们系统地搜索了PubMed的电子数据库,MedRxiv和GoogleScholar,直到2022年1月5日,使用关键的MeSH关键字。
    结果:1433例非住院COVID-19患者的3期研究的最终结果显示,入院或死亡的复合风险显着降低(绝对风险差异,-3.0%[95%置信区间{CI},-5.9至-0.1%];单侧P=0.02),尽管相对风险降低了31%(RRR)。单独死亡的RRR为89%(95%CI,14至99;P值未报告)。在COVID-19患者中,为预防1例死亡或1例住院或复合死亡而需要治疗的人数似乎与其他具有EUA的药物紧密竞争。然而,从成本上讲,与所有其他代理商相比,莫努普拉韦相对便宜。
    结论:Molnupiravir可能是一种有效的药物,用于未怀孕的未接种COVID-19疫苗的成年人,他们的严重程度包括住院风险增加。然而,它只有在症状发作后5天内使用时才有效。5天的疗程似乎是安全的,没有任何明显的短期副作用。
    OBJECTIVE: Molnupiravir is a newer oral antiviral drug that has recently received emergency use authorization (EUA) in USA, UK and India. We aim to conduct an update on our previous systematic review to provide practical clinical guideline for using molnupiravir in patients with COVID-19.
    METHODS: We systematically searched the electronic database of PubMed, MedRxiv and Google Scholar until January 5, 2022, using key MeSH keywords.
    RESULTS: Final result of phase 3 study in 1433 non-hospitalized COVID-19 patients showed a significant reduction in composite risk of hospital admission or death (absolute risk difference, -3.0% [95% confidence interval {CI}, -5.9 to -0.1%]; 1-sided P = 0.02) although with a non-significant 31% relative risk reduction (RRR). RRR for death alone was 89% (95% CI, 14 to 99; P-value not reported). Number needed to treat to prevent 1 death or 1 hospitalization or death composite appears to be closely competitive to other agents having EUA in people with COVID-19. However, cost-wise molnupiravir is comparatively cheaper compared to all other agents.
    CONCLUSIONS: Molnupiravir could be a useful agent in non-pregnant unvaccinated adults with COVID-19 who are at increased risk of severity including hospitalization. However, it is effective only when used within 5-days of onset of symptoms. A 5-days course seems to be safe without any obvious short-term side effects.
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  • 文章类型: Journal Article
    Safinamide是左旋多巴的一种新型附加药物,用于治疗具有运动波动的帕金森病(PD)。由于沙芬酰胺最近被纳入常规临床实践,迄今为止,尚未进行关于沙芬酰胺安全性的授权后IV期研究.本研究根据一组运动障碍专家的意见,提供了safinamide的临床管理指南。该项目分两个阶段进行:第一阶段的16次地方会议和第二阶段的一次全国会议。会议遵循了预先确定的议程。目前的临床实践指南是基于全国会议期间得出的主要结论。该小组得出结论,沙芬酰胺可有效减少运动和非运动波动。轻度至中度波动的PD患者从治疗中获益最多,尽管该药物也可能改善晚期PD患者的临床状况。其他多巴胺能药物的剂量可能会减少后引入safinamide,这将有助于减少冲动控制障碍等不良反应。在高于通常处方的剂量下,safinamide也可以改善运动障碍。专家们一致认为,与安慰剂相比,沙芬酰胺耐受性良好,不良反应少。
    Safinamide is a new add-on drug to levodopa for the treatment of Parkinson\'s disease (PD) with motor fluctuations. Due to the recent incorporation of safinamide into routine clinical practice, no post-authorisation phase IV studies on the safety of safinamide have been conducted to date. This study provides clinical management guidelines for safinamide based on the opinion of a group of experts in movement disorders. This project was developed in 2 phases: 16 local meetings in phase 1 and a national meeting in phase 2. The meetings followed a pre-established agenda. The present clinical practice guidelines are based on the main conclusions reached during the national meeting. The group concluded that safinamide is effective in reducing motor and non-motor fluctuations. PD patients with mild-to-moderate fluctuations benefit most from treatment, although the drug may also improve the clinical status of patients with advanced PD. The dose of other dopaminergic drugs may be reduced after introducing safinamide, which would contribute to reducing such adverse reactions as impulse control disorder. At doses higher than those usually prescribed, safinamide may also improve dyskinesia. The experts agreed that safinamide is well tolerated and causes few adverse reactions when compared with placebo.
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  • 文章类型: Journal Article
    The coronavirus disease 2019 pandemic continues to affect millions worldwide. Given the rapidly growing evidence base, we implemented a living guideline model to provide guidance on the management of patients with severe or critical coronavirus disease 2019 in the ICU.
    The Surviving Sepsis Campaign Coronavirus Disease 2019 panel has expanded to include 43 experts from 14 countries; all panel members completed an electronic conflict-of-interest disclosure form. In this update, the panel addressed nine questions relevant to managing severe or critical coronavirus disease 2019 in the ICU. We used the World Health Organization\'s definition of severe and critical coronavirus disease 2019. The systematic reviews team searched the literature for relevant evidence, aiming to identify systematic reviews and clinical trials. When appropriate, we performed a random-effects meta-analysis to summarize treatment effects. We assessed the quality of the evidence using the Grading of Recommendations, Assessment, Development, and Evaluation approach, then used the evidence-to-decision framework to generate recommendations based on the balance between benefit and harm, resource and cost implications, equity, and feasibility.
    The Surviving Sepsis Campaign Coronavirus Diease 2019 panel issued nine statements (three new and six updated) related to ICU patients with severe or critical coronavirus disease 2019. For severe or critical coronavirus disease 2019, the panel strongly recommends using systemic corticosteroids and venous thromboprophylaxis but strongly recommends against using hydroxychloroquine. In addition, the panel suggests using dexamethasone (compared with other corticosteroids) and suggests against using convalescent plasma and therapeutic anticoagulation outside clinical trials. The Surviving Sepsis Campaign Coronavirus Diease 2019 panel suggests using remdesivir in nonventilated patients with severe coronavirus disease 2019 and suggests against starting remdesivir in patients with critical coronavirus disease 2019 outside clinical trials. Because of insufficient evidence, the panel did not issue a recommendation on the use of awake prone positioning.
    The Surviving Sepsis Campaign Coronavirus Diease 2019 panel issued several recommendations to guide healthcare professionals caring for adults with critical or severe coronavirus disease 2019 in the ICU. Based on a living guideline model the recommendations will be updated as new evidence becomes available.
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  • 文章类型: Journal Article
    What is the role of remdesivir in the treatment of severe covid-19? This guideline was triggered by the ACTT-1 trial published in the New England Journal of Medicine on 22 May 2020.
    Remdesivir has received worldwide attention as a potentially effective treatment for severe covid-19. After rapid market approval in the US, remdesivir is already being used in clinical practice.
    The guideline panel makes a weak recommendation for the use of remdesivir in severe covid-19 while recommending continuation of active enrolment of patients into ongoing randomised controlled trials examining remdesivir.
    An international panel of patients, clinicians, and methodologists produced these recommendations in adherence with standards for trustworthy guidelines using the GRADE approach. The recommendations are based on a linked systematic review and network meta-analysis. The panel considered an individual patient perspective and allowed contextual factors (such as resources) to be taken into account for countries and healthcare systems.
    The linked systematic review (published 31 Jul 2020) identified two randomised trials with 1300 participants, showing low certainty evidence that remdesivir may be effective in reducing time to clinical improvement and may decrease mortality in patients with severe covid-19. Remdesivir probably has no important effect on need for invasive mechanical ventilation. Remdesivir may have little or no effect on hospital length of stay.
    Most patients with severe covid-19 would likely choose treatment with remdesivir given the potential reduction in time to clinical improvement. However, given the low certainty evidence for critical outcomes and the fact that different perspectives, values, and preferences may alter decisions regarding remdesivir, the panel issued a weak recommendation with strong support for continued recruitment in randomised trials.
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  • 文章类型: Letter
    暂无摘要。
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  • 文章类型: Journal Article
    抗体的互补决定区(CDR)被认为是抗原识别和结合的原因,因此也包含抗原结合位点。CDR通常通过搜索最不同的区域来辨别,在顺序或结构中,在不同的抗体之间。这里,我们表明,实际结合抗原的抗体残基的约20%落在CDR之外。然而,几乎所有的抗原结合残基都位于抗体间结构共有区.此外,我们表明,覆盖抗原结合位点的这些结构共有区域可从抗体序列中识别。分析抗原结合残基对抗体-抗原复合物稳定性的预测贡献,我们表明,落在传统定义的CDR之外的残基对抗原结合至少与CDR内的残基一样重要,在某些情况下,它们在能量上更加重要。此外,落在结构共有区域之外但在传统定义的CDR内的抗原结合残基显示对抗原结合的边际能量贡献。这些发现允许系统和全面的鉴定抗原结合位点,这可以提高对抗原相互作用的理解,并可能用于抗体工程和B细胞表位鉴定。
    The Complementarity Determining Regions (CDRs) of antibodies are assumed to account for the antigen recognition and binding and thus to contain also the antigen binding site. CDRs are typically discerned by searching for regions that are most different, in sequence or in structure, between different antibodies. Here, we show that ~20% of the antibody residues that actually bind the antigen fall outside the CDRs. However, virtually all antigen binding residues lie in regions of structural consensus across antibodies. Furthermore, we show that these regions of structural consensus which cover the antigen binding site are identifiable from the sequence of the antibody. Analyzing the predicted contribution of antigen binding residues to the stability of the antibody-antigen complex, we show that residues that fall outside of the traditionally defined CDRs are at least as important to antigen binding as residues within the CDRs, and in some cases, they are even more important energetically. Furthermore, antigen binding residues that fall outside of the structural consensus regions but within traditionally defined CDRs show a marginal energetic contribution to antigen binding. These findings allow for systematic and comprehensive identification of antigen binding sites, which can improve the understanding of antigenic interactions and may be useful in antibody engineering and B-cell epitope identification.
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  • 文章类型: Journal Article
    Phytases play important roles in agricultural and feed industries. In this study, the stability of a beta-propeller phytase, PhyL, from Bacillus licheniformis was successfully improved by introducing Xaa-->Pro and Gly-->Ala substitutions at consensus positions. Our results suggest that Gly-->Ala substitution is a more promising strategy to improve protein stability.
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  • 文章类型: Journal Article
    哺乳动物物种翻译起始的最佳背景是GCCRCCaugG(其中R=嘌呤,“aug”是起始密码子),-3R和+4G尤为重要。+4G的存在已被解释为有效翻译启动所必需的。积累的实验和生物信息学证据提出了一种基于氨基酸对第二密码子的限制的替代解释。即,需要氨基酸Ala或Gly作为初生肽中的第二个氨基酸,用于裂解引发剂Met,Ala和Gly密码子(GCN和GGN)的过度使用导致了4G共识。我基于34169个人类蛋白质编码基因和已发布的基因表达数据,对+4G进行了这些替代假设的关键测试。结果表明,+4G的流行与翻译启动无关。在五个G起始密码子中,只有丙氨酸密码子(GCN),和甘氨酸密码子(GGN)的程度要小得多,在第二个密码子中被高估了,而其他三个密码子并没有过多。虽然高表达基因比低表达基因有更多的+4G,该差异是由第二密码子处的GCN和GGN密码子引起的。这些结果与高效翻译启动所需的+4G不一致,但与氨基酸约束假说的提出一致。
    The optimal context for translation initiation in mammalian species is GCCRCCaugG (where R = purine and \"aug\" is the initiation codon), with the -3R and +4G being particularly important. The presence of +4G has been interpreted as necessary for efficient translation initiation. Accumulated experimental and bioinformatic evidence has suggested an alternative explanation based on amino acid constraint on the second codon, i.e., amino acid Ala or Gly are needed as the second amino acid in the nascent peptide for the cleavage of the initiator Met, and the consequent overuse of Ala and Gly codons (GCN and GGN) leads to the +4G consensus. I performed a critical test of these alternative hypotheses on +4G based on 34169 human protein-coding genes and published gene expression data. The result shows that the prevalence of +4G is not related to translation initiation. Among the five G-starting codons, only alanine codons (GCN), and glycine codons (GGN) to a much smaller extent, are overrepresented at the second codon, whereas the other three codons are not overrepresented. While highly expressed genes have more +4G than lowly expressed genes, the difference is caused by GCN and GGN codons at the second codon. These results are inconsistent with +4G being needed for efficient translation initiation, but consistent with the proposal of amino acid constraint hypothesis.
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  • 文章类型: Journal Article
    All the alpha subunits of the Na+,K+ -ATPases and H+,K+ -ATPases have a protein kinase A (PKA) consensus sequence near or in the ninth transmembrane domain. The role of this domain in influencing alpha subunit synthesis/degradation, plasma membrane localization, and 86Rb+ uptake has not been established for the alpha subunit of the colonic H+,K+ -ATPase. This study examined the effect of mutating S955 (within the PKA consensus site of the alpha subunit of the colonic H+,K+ -ATPase [HKalpha2]) to alanine (S955/A) or aspartic acid (S955/D) on alpha subunit expression and function. The results demonstrate that a negatively charged amino acid at position 955 of HKalpha2 promotes higher expression levels of both whole-cell and plasma membrane-localized HKalpha2. Moreover, inhibition of PKA reduced expression of wild-type HKalpha2 and associated 86Rb+ uptake. Last, the activity of the HKalpha2 S955/A was rescued by treatment with 4-phenylbutyric acid, a compound that was shown previously to restore function to the cystic fibrosis transmembrane conductance regulator.
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