关键词: Lab-on-a-chip Molecular diagnostics Point-of-care tests Real-time RT-PCR Respiratory infections

Mesh : Humans COVID-19 / diagnosis SARS-CoV-2 / isolation & purification genetics Influenza, Human / diagnosis virology Influenza A virus / isolation & purification genetics Influenza B virus / isolation & purification genetics Respiratory Syncytial Virus Infections / diagnosis virology Sensitivity and Specificity Lab-On-A-Chip Devices Multiplex Polymerase Chain Reaction / methods Respiratory Syncytial Viruses / isolation & purification genetics Coinfection / virology diagnosis COVID-19 Nucleic Acid Testing / methods instrumentation

来  源:   DOI:10.1016/j.diagmicrobio.2024.116325

Abstract:
Following the relaxation of COVID-19 restrictions, other respiratory viruses such as influenza and respiratory syncytial virus (RSV), whose transmission were decreased due to COVID-19 precautions, are rising again. Because of similar clinical features and reported co-infections, multiplex detection of SARS-CoV-2, influenza A/B, and RSV is required to use specific treatments. This study assessed an extraction-free sample preparation (heat treatment at 95°C for 3 minutes) for multiplex detection using rRT-PCR. Despite an observed Ct-delay (∆Ct) averageing 1.26 compared to the standard method, an acceptable total sensitivity of 92 % and a negative predictive value (NPV) of 96 % were obtained. Moreover, Implementation on a microfluidic chip demonstrated efficiency, maintaining an excellent correlation (R2=0.983) with the standard method. Combining this extraction-free procedure with rRT-PCR on a microfluidic chip seems promising, because it simplifies the design and reduces the cost and complexity of the integrated assay for multiplex detection of SARS-CoV-2, influenza A/B, and RSV.
摘要:
随着COVID-19限制的放松,其他呼吸道病毒,如流感和呼吸道合胞病毒(RSV),由于COVID-19的预防措施,其传播量减少,再次上升。由于相似的临床特征和报告的合并感染,SARS-CoV-2,甲型/乙型流感,和RSV需要使用特定的治疗。该研究评估了使用rRT-PCR进行多重检测的无提取样品制备(在95°C热处理3分钟)。尽管与标准方法相比,观察到的Ct延迟(ΔCt)平均为1.26,可接受的总灵敏度为92%,阴性预测值(NPV)为96%.此外,在微流控芯片上的实现证明了效率,与标准方法保持良好的相关性(R2=0.983)。将这种无提取程序与微流体芯片上的rRT-PCR相结合似乎很有希望,因为它简化了设计并降低了用于SARS-CoV-2,流感A/B多重检测的集成检测的成本和复杂性,RSV
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