关键词: antibiotics metal coordination metallo-β-lactamase (MBL) x-ray crystallography

Mesh : Bacillus subtilis / enzymology Bacterial Proteins / chemistry genetics metabolism Binding Sites Catalytic Domain Coordination Complexes / chemistry Crystallography, X-Ray Drug Resistance, Multiple, Bacterial Endoribonucleases / chemistry genetics metabolism Evolution, Molecular Flavobacteriaceae / enzymology Models, Molecular Mutagenesis, Site-Directed Protein Binding Protein Conformation Structure-Activity Relationship Water Zinc / metabolism beta-Lactamases / chemistry genetics metabolism

来  源:   DOI:10.3390/ijms21144926   PDF(Sci-hub)   PDF(Pubmed)

Abstract:
The increasing incidence of community- and hospital-acquired infections with multidrug-resistant (MDR) bacteria poses a critical threat to public health and the healthcare system. Although β-lactam antibiotics are effective against most bacterial infections, some bacteria are resistant to β-lactam antibiotics by producing β-lactamases. Among β-lactamases, metallo-β-lactamases (MBLs) are especially worrisome as only a few inhibitors have been developed against them. In MBLs, the metal ions play an important role as they coordinate a catalytic water molecule that hydrolyzes β-lactam rings. We determined the crystal structures of different variants of PNGM-1, an ancient MBL with additional tRNase Z activity. The variants were generated by site-directed mutagenesis targeting metal-coordinating residues. In PNGM-1, both zinc ions are coordinated by six coordination partners in an octahedral geometry, and the zinc-centered octahedrons share a common face. Structures of the PNGM-1 variants confirm that the substitution of a metal-coordinating residue causes the loss of metal binding and β-lactamase activity. Compared with PNGM-1, subclass B3 MBLs lack one metal-coordinating residue, leading to a shift in the metal-coordination geometry from an octahedral to tetrahedral geometry. Our results imply that a subtle change in the metal-binding site of MBLs can markedly change their metal-coordination geometry and catalytic activity.
摘要:
暂无翻译
公众号