关键词: circular dichroism (CD) collagen extracellular matrix heterotrimer interruption nuclear magnetic resonance (NMR) structure-function

Mesh : Amino Acid Sequence Binding Sites Circular Dichroism Collagen Type IV / chemistry Extracellular Matrix / metabolism Glycine / chemistry Humans Hydrogen Bonding Magnetic Resonance Spectroscopy Molecular Sequence Data Non-Fibrillar Collagens / chemistry Peptides / chemistry Protein Binding Protein Conformation Protein Multimerization Protein Structure, Secondary Sequence Homology, Amino Acid Structure-Activity Relationship

来  源:   DOI:10.1074/jbc.M115.654871

Abstract:
All non-fibrillar collagens contain interruptions in the (Gly-X-Y)n repeating sequence, such as the more than 20 interruptions found in chains of basement membrane type IV collagen. Two selectively doubly labeled peptides are designed to model a site in type IV collagen with a GVG interruption in the α1(IV) and a corresponding GISLK sequence within the α2(IV) chain. CD and NMR studies on a 2:1 mixture of these two peptides support the formation of a single-component heterotrimer that maintains the one-residue staggering in the triple-helix, has a unique chain register, and contains hydrogen bonds at the interruption site. Formation of hydrogen bonds at interruption sites may provide a driving force for self-assembly and chain register in type IV and other non-fibrillar collagens. This study illustrates the potential role of interruptions in the structure, dynamics, and folding of natural collagen heterotrimers and forms a basis for understanding their biological role.
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