voxel

体素
  • 文章类型: Journal Article
    计算机视觉的研究小组,图形,机器学习已经将大量的注意力集中在3D对象重建领域,增强,和注册。深度学习是人工智能中用于解决计算机视觉挑战的主要方法。然而,三维数据的深度学习存在明显的障碍,现在正处于起步阶段。特别是针对三维数据的深度学习取得了重大进展,提供一系列解决这些问题的方法。本研究全面考察了深度学习方法的最新进展。我们检查了许多用于3D对象配准任务的基准模型,增强,和重建。我们彻底分析他们的架构,优势,和约束。总之,本报告全面概述了三维深度学习的最新进展,并强调了未来需要解决的尚未解决的研究领域。
    The research groups in computer vision, graphics, and machine learning have dedicated a substantial amount of attention to the areas of 3D object reconstruction, augmentation, and registration. Deep learning is the predominant method used in artificial intelligence for addressing computer vision challenges. However, deep learning on three-dimensional data presents distinct obstacles and is now in its nascent phase. There have been significant advancements in deep learning specifically for three-dimensional data, offering a range of ways to address these issues. This study offers a comprehensive examination of the latest advancements in deep learning methodologies. We examine many benchmark models for the tasks of 3D object registration, augmentation, and reconstruction. We thoroughly analyse their architectures, advantages, and constraints. In summary, this report provides a comprehensive overview of recent advancements in three-dimensional deep learning and highlights unresolved research areas that will need to be addressed in the future.
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  • 文章类型: Journal Article
    用于3D体积生成和重建的生成对抗网络(GAN),例如形状生成,可视化,自动化设计,实时仿真,和研究应用,在各个领域受到越来越多的关注。然而,挑战,如有限的培训数据,高计算成本,和模式崩溃问题仍然存在。我们建议结合变分自动编码器(VAE)和GAN来发现增强的3D结构,并引入一种稳定且可扩展的渐进生长方法来生成和重建复杂的基于体素的3D形状。级联结构的网络包括发生器和鉴别器,从较小的体素大小开始,并逐步添加层,同时随后在每个新添加的层中使用地面实况标签来监督鉴别器,以对更广泛的体素空间进行建模。我们的方法通过稳定增长提高了收敛速度并提高了生成的3D模型的质量,从而促进复杂的体素级别细节的准确表示。通过与现有方法的比较实验,我们证明了我们的方法在评估体素质量方面的有效性,变体,和多样性。生成的模型在3D评估指标和视觉质量方面表现出更高的准确性,使它们在各个领域都有价值,包括虚拟现实,隐喻者,和游戏。
    Generative Adversarial Networks (GANs) for 3D volume generation and reconstruction, such as shape generation, visualization, automated design, real-time simulation, and research applications, are receiving increased amounts of attention in various fields. However, challenges such as limited training data, high computational costs, and mode collapse issues persist. We propose combining a Variational Autoencoder (VAE) and a GAN to uncover enhanced 3D structures and introduce a stable and scalable progressive growth approach for generating and reconstructing intricate voxel-based 3D shapes. The cascade-structured network involves a generator and discriminator, starting with small voxel sizes and incrementally adding layers, while subsequently supervising the discriminator with ground-truth labels in each newly added layer to model a broader voxel space. Our method enhances the convergence speed and improves the quality of the generated 3D models through stable growth, thereby facilitating an accurate representation of intricate voxel-level details. Through comparative experiments with existing methods, we demonstrate the effectiveness of our approach in evaluating voxel quality, variations, and diversity. The generated models exhibit improved accuracy in 3D evaluation metrics and visual quality, making them valuable across various fields, including virtual reality, the metaverse, and gaming.
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  • 文章类型: Randomized Controlled Trial
    尽管取得了重大进展和治疗进展,但酒精依赖仍然是全球的主要负担。这项研究的目的是调查神经反馈训练是否可以改变大脑区域的静息状态fMRI活动,这些活动在酒精依赖患者的成瘾障碍中起着至关重要的作用。为此,本研究共招募了52名患者,随机化,分为活动组和虚假组。活动组的患者接受了三次神经反馈训练。我们比较了活动组中的静息状态数据,作为六个测量日的NF训练的一部分。当将神经反馈第3天的活动组的结果与基线1进行比较时,发现腹侧注意网络区域的激活体素显着减少。这表明受试者在治疗过程中活动的减少可能导致与外部刺激的更大独立性。总的来说,在研究中,与基线相比,在所有3个分析网络中,我们观察到激活体素整体下降.使用静息状态数据作为潜在的生物标志物,随着这些网络中活动的变化,可能是帮助恢复认知过程和酒精滥用相关的渴望和情绪。
    Alcohol dependence continues to be a major global burden despite significant research progress and treatment development. The aim of this study was to investigate whether neurofeedback training can alter resting state fMRI activity in brain regions that play a crucial role in addiction disorders in patients with alcohol dependence. For this purpose, a total of 52 patients were recruited for the present study, randomized, and divided into an active and a sham group. Patients in the active group received three sessions of neurofeedback training. We compared the resting state data in the active group as part of the NF training on six measurement days. When comparing the results of the active group from neurofeedback day 3 with baseline 1, a significant reduction in activated voxels in the ventral attention network area was seen. This suggests that reduced activity over the course of therapy in subjects may lead to greater independence from external stimuli. Overall, a global decrease in activated voxels within all three analysed networks compared to baseline was observed in the study. The use of resting-state data as potential biomarkers, as activity changes within these networks, may be to help restore cognitive processes and alcohol abuse-related craving and emotions.
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  • 文章类型: Review
    由于成本的不断降低和设备的改进,实时三维超声心动图(RT3DE)在兽医领域越来越多。就像它的运动模式和二维对应物一样,RT3DE图像和数据集的采集和分析通过对技术方面的透彻了解而大大提高,基本的物理原理,以及对可用模式及其优缺点的了解。在这次审查中,作者旨在描述当前可用的RT3DE技术是如何演变的,解释设备的技术方面,并说明了图像采集和可视化的最常用模式。
    Real-time three-dimensional echocardiography (RT3DE) is increasingly available in the veterinary field due to continuous reduction in costs and improvement of equipment. Much like its motion-mode and bi-dimensional counterparts, acquisition and analysis of RT3DE images and datasets is greatly improved by a thorough understanding of the technological aspects, basic physic principles, and knowledge of available modalities with their advantages and drawbacks. In this review, the authors aim to describe how the currently available RT3DE technology has evolved, explain technical aspects of the equipment, and illustrate the most commonly available modalities for image acquisition and visualization.
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  • 文章类型: Journal Article
    在复杂干扰下获得具有高描述性和鲁棒性的3D特征描述是3D特征匹配中的一项重要且具有挑战性的任务。本文提出了一种新颖的特征描述,由稳定的局部参考框架(LRF)和基于局部空间体素的特征描述符组成。首先,通过将距离权重合并到Z轴和X轴计算中,设计了一种改进的LRF。随后,基于LRF和体素分割,提出了一种基于体素均匀化的特征描述符。此外,进行了立方体体素的均匀分割,考虑每个体素及其相邻体素的特征值,从而增强了描述的稳定性。描述符的性能在三个公共数据集上进行了严格的测试和评估,表现出很高的描述性,鲁棒性,与其他现有方法相比,性能优越。此外,描述符被应用于3D注册试验,结果证明了我们方法的可靠性。
    Obtaining a 3D feature description with high descriptiveness and robustness under complicated nuisances is a significant and challenging task in 3D feature matching. This paper proposes a novel feature description consisting of a stable local reference frame (LRF) and a feature descriptor based on local spatial voxels. First, an improved LRF was designed by incorporating distance weights into Z- and X-axis calculations. Subsequently, based on the LRF and voxel segmentation, a feature descriptor based on voxel homogenization was proposed. Moreover, uniform segmentation of cube voxels was performed, considering the eigenvalues of each voxel and its neighboring voxels, thereby enhancing the stability of the description. The performance of the descriptor was strictly tested and evaluated on three public datasets, which exhibited high descriptiveness, robustness, and superior performance compared with other current methods. Furthermore, the descriptor was applied to a 3D registration trial, and the results demonstrated the reliability of our approach.
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  • 文章类型: Journal Article
    :通过基于三维体素的形态计量学(VBM)定量计算经皮椎体成形术(PVP)后骨折椎体的结构变化,比较单侧椎弓根椎体成形术(UEV)和双侧经椎弓根椎体成形术(BTV)。
    :我们计算了骨水泥体积(BCV);椎体体积(VBV);椎间盘内渗漏BCV;和空间,对称,甚至使用VBM用2种不同的PVP治疗的222个椎体中的骨水泥分布(BCD),并评估了随后的椎体压缩骨折(SVCF)的发生率。进行统计分析以比较2种不同的PVP之间的值。
    :相对BCV,这是SVCF的潜在风险因素,根据使用VBM的数据,BTV组较高(0.22±0.03vs.0.29±0.03;p<0.001,t检验);然而,两次手术之间的SVCF发生率没有显着差异(UEV,24.7%;BTV,31%;p=0.046,卡方检验)。Spatial,甚至,并且使用VBM在UEV和BTV之间沿3个轴的对称BCD没有显着差异(x,y,z轴,p=0.893,p=0.590,p=0.908,卡方检验)。
    :与直觉相反,UEV可以注入比BTV足够且更优化的BCV。此外,它可以在空间上注入骨水泥,对称,与基于VBM的BTV相比,分布均匀,没有增加椎间盘内渗漏率和SVCF。因此,UEV可能是一种优越的替代手术方法,具有相似的临床有效性和安全性,考虑到上述结果和UEV侵入性较小的共识。
    OBJECTIVE: To compare unilateral extrapedicular vertebroplasty (UEV) and bilateral transpedicular vertebroplasty (BTV) by quantitatively calculating the structural changes of fractured vertebral body after percutaneous vertebroplasty (PVP) using 3-dimensional voxel-based morphometry (VBM).
    METHODS: We calculated bone cement volume (BCV); vertebral body volume (VBV); leaked intradiscal BCV; and spatial, symmetric, and even bone cement distribution (BCD) in and out of 222 vertebral bodies treated with 2 different PVPs using VBM and evaluated the incidence of subsequent vertebral compression fracture (SVCF). Statistical analyses were conducted to compare values between the 2 different PVPs.
    RESULTS: Relative BCV, which is a potential risk factor for SVCF, was higher in the BTV group based on the data using VBM (0.22±0.03 vs. 0.29±0.03; p<0.001, t-test); however, the SVCF incidence between the 2 surgeries was not significantly different (UEV, 24.7%; BTV, 31%; p=0.046, chi-square test). Spatial, even, and symmetric BCD along the 3 axes was not significantly different between UEV and BTV using VBM (x, y, z-axis, p=0.893, p= 0.590, p=0.908 respectively, chi-square test).
    CONCLUSIONS: Contrary to intuitive concerns, UEV can inject a sufficient and more optimal BCV than BTV. Additionally, it can inject bone cement spatially, symmetrically, and evenly well-distributed without an increased rate of intradiscal leakage and SVCF compared with BTV based on VBM. Therefore, UEV could be a superior alternative surgical method with similar clinical effectiveness and safety, considering the above results and the consensus that UEV is less invasive.
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  • 文章类型: Journal Article
    本文提出了一种新的反射对称检测算法,它专门用于检测地球观测(EO)数据集中的最大对称模式。首先,我们强调了使EO数据中的对称性检测不同于其他几何集合中的检测的特殊性。EO数据采集不能提供精确的对称元件对,因此,必须解决近似对称性,这是通过体素化来完成的。除此之外,顶视图中的EO数据对称模式通常包含用于进一步处理的最有用的信息,因此,它足以检测具有垂直对称平面的对称性。该算法首先提取所谓的有趣体素,然后找到对称的线段对,分别为每个水平体素切片。然后合并具有相同对称平面的结果,首先在单个切片中,然后通过所有切片。检测到的最大对称模式表示所谓的部分对称性,可以进一步处理以识别全局和局部对称性。本文分析了斯洛文尼亚六个不同尺度和不同体素分辨率的城市和自然景点的LiDAR数据集,展示高检测速度和解决方案的质量。
    The paper presents a new algorithm for reflection symmetry detection, which is specialized to detect maximal symmetric patterns in an Earth observation (EO) dataset. First, we stress the particularities that make symmetry detection in EO data different from detection in other geometric sets. The EO data acquisition cannot provide exact pairs of symmetric elements and, therefore, the approximate symmetry must be addressed, which is accomplished by voxelization. Besides this, the EO data symmetric patterns in the top view usually contain the most useful information for further processing and, thus, it suffices to detect symmetries with vertical symmetry planes. The algorithm first extracts the so-called interesting voxels and then finds symmetric pairs of line segments, separately for each horizontal voxel slice. The results with the same symmetry plane are then merged, first in individual slices and then through all the slices. The detected maximal symmetric patterns represent the so-called partial symmetries, which can be further processed to identify global and local symmetries. LiDAR datasets of six urban and natural attractions in Slovenia of different scales and in different voxel resolutions were analyzed in this paper, demonstrating high detection speed and quality of solutions.
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  • 文章类型: Journal Article
    剂量-体积直方图历来用于研究计划的辐射剂量与健康组织损伤之间的关系。然而,这种方法既不考虑空间信息,也不考虑危险器官内的异质放射敏感性,取决于组织。最近,在文献中出现了体素分析作为从计划剂量分布中充分利用三维信息的强大工具。它们可以识别一个或几个器官的解剖子区域,其中辐照剂量与给定的毒性有关。这些方法依赖于精确的解剖对齐,通常通过非严格的注册获得。一旦不同的解剖结构在空间上归一化,三维剂量和给定毒性之间的相关性可以逐体素探索。可以对每个体素执行参数或非参数统计测试,以识别其中剂量在呈现或不呈现毒性的患者之间显著不同的体素。与泌尿生殖系统相关的几个解剖亚区域,胃肠,心脏,在文献中已经确定了前列腺的肺或血液毒性,头颈部或胸部照射。因此,体素分析似乎首先特别有趣的是,通过识别其辐射高度预测特定毒性的风险器官中的特定子区域来提高毒性预测能力。第二个兴趣是通过限制预测子区域的剂量来降低放射性诱导的毒性。而不减少目标体积中的剂量。已经指出了该方法的局限性。
    Dose - volume histograms have been historically used to study the relationship between the planned radiation dose and healthy tissue damage. However, this approach considers neither spatial information nor heterogenous radiosensitivity within organs at risk, depending on the tissue. Recently, voxel-wise analyses have emerged in the literature as powerful tools to fully exploit three-dimensional information from the planned dose distribution. They allow to identify anatomical subregions of one or several organs in which the irradiation dose is associated with a given toxicity. These methods rely on an accurate anatomical alignment, usually obtained by means of a non-rigid registration. Once the different anatomies are spatially normalised, correlations between the three-dimensional dose and a given toxicity can be explored voxel-wise. Parametric or non-parametric statistical tests can be performed on every voxel to identify the voxels in which the dose is significantly different between patients presenting or not toxicity. Several anatomical subregions associated with genitourinary, gastrointestinal, cardiac, pulmonary or haematological toxicity have already been identified in the literature for prostate, head and neck or thorax irradiation. Voxel-wise analysis appears therefore first particularly interesting to increase toxicity prediction capability by identifying specific subregions in the organs at risk whose irradiation is highly predictive of specific toxicity. The second interest is potentially to decrease the radio-induced toxicity by limiting the dose in the predictive subregions, while not decreasing the dose in the target volume. Limitations of the approach have been pointed out.
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  • 文章类型: Journal Article
    统计病变-症状映射在很大程度上由具有零假设显著性检验的频率方法主导。它们在绘制功能脑解剖结构方面很受欢迎,但伴随着一些挑战和局限性。典型分析设计和临床病变数据的结构与多重比较问题相联系,一个协会的问题,统计能力的限制,缺乏对零假设证据的洞察力。贝叶斯病变缺陷推断(BLDI)可能是一种改进,因为它收集了零假设的证据,即没有效果,并且不会在重复测试中累积α误差。我们通过贝叶斯t检验和一般线性模型通过贝叶斯因子映射实现了BLDI,并与基于置换的家族错误校正的频繁病变-症状映射进行了比较,评估了其性能。我们在300名中风患者的计算机模拟研究中绘制了模拟缺陷的体素神经相关性,137名中风患者的语音语言流畅性和建设性能力的体素和断开神经相关性。频率论和贝叶斯病变缺陷推断的表现在分析中差异很大。总的来说,BLDI可以找到有原假设证据的领域,并且在为替代假设提供证据方面在统计学上更加自由,即病变-赤字关联的识别。BLDI在频率论方法通常受到强烈限制的情况下表现更好,例如,在平均小病变和低功率的情况下,BLDI还在数据的信息价值方面提供了前所未有的透明度。另一方面,BLDI遭受了更多的关联问题,在具有高统计功效的分析中,这导致了病变-缺陷关联的明显超调。我们进一步实施了一种新的病灶大小控制方法,适应性病变大小控制,That,在许多情况下,能够对抗协会问题施加的限制,并增加了零假设和替代假设的真实证据。总之,我们的结果表明,BLDI是病变-缺陷推断方法组合中的一个有价值的补充,具有一些特异性和排他性的优势:它可以更好地处理较小的病变和较低的统计功效(即小样本和效应大小),并识别不存在病变-缺陷关联的区域.然而,在所有方面,它并不优于既定的频率主义方法,因此不被视为一般的替代品。为了使贝叶斯病变缺陷推断更容易获得,我们发布了一个R工具包,用于分析体素和断开连接数据。
    Statistical lesion-symptom mapping is largely dominated by frequentist approaches with null hypothesis significance testing. They are popular for mapping functional brain anatomy but are accompanied by some challenges and limitations. The typical analysis design and the structure of clinical lesion data are linked to the multiple comparison problem, an association problem, limitations to statistical power, and a lack of insights into evidence for the null hypothesis. Bayesian lesion deficit inference (BLDI) could be an improvement as it collects evidence for the null hypothesis, i.e. the absence of effects, and does not accumulate α-errors with repeated testing. We implemented BLDI by Bayes factor mapping with Bayesian t-tests and general linear models and evaluated its performance in comparison to frequentist lesion-symptom mapping with a permutation-based family-wise error correction. We mapped the voxel-wise neural correlates of simulated deficits in an in-silico-study with 300 stroke patients, and the voxel-wise and disconnection-wise neural correlates of phonemic verbal fluency and constructive ability in 137 stroke patients. Both the performance of frequentist and Bayesian lesion-deficit inference varied largely across analyses. In general, BLDI could find areas with evidence for the null hypothesis and was statistically more liberal in providing evidence for the alternative hypothesis, i.e. the identification of lesion-deficit associations. BLDI performed better in situations in which the frequentist method is typically strongly limited, for example with on average small lesions and in situations with low power, where BLDI also provided unprecedented transparency in terms of the informative value of the data. On the other hand, BLDI suffered more from the association problem, which led to a pronounced overshoot of lesion-deficit associations in analyses with high statistical power. We further implemented a new approach to lesion size control, adaptive lesion size control, that, in many situations, was able to counter the limitations imposed by the association problem, and increased true evidence both for the null and the alternative hypothesis. In summary, our results suggest that BLDI is a valuable addition to the method portfolio of lesion-deficit inference with some specific and exclusive advantages: it deals better with smaller lesions and low statistical power (i.e. small samples and effect sizes) and identifies regions with absent lesion-deficit associations. However, it is not superior to established frequentist approaches in all respects and therefore not to be seen as a general replacement. To make Bayesian lesion-deficit inference widely accessible, we published an R toolkit for the analysis of voxel-wise and disconnection-wise data.
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  • 文章类型: Journal Article
    轻质生物启发结构因其已知的优势而在工业应用中非常有趣,特别是当使用增材制造技术时。晶格由称为韧带的轴向元素组成:几个单位单元在三个方向上重复以形成物体。然而,当需要设计或数值模拟晶格时,它们固有的结构复杂性会导致几个问题。捕获整个组件所需的计算能力极高。出于这个原因,文献中开发了一些称为均质化方法的替代方法。然而,遵循这些方法,设计者没有晶格行为的局部视觉概述,尤其是在韧带水平。出于这个原因,一种替代的一维(1D)建模方法,在这项工作中提出了所谓的晶格到1D。这种方法用其光束轴近似韧带元素,使用真实的材料特性,并将横截面信息直接提供给求解器。几种线性弹性模拟,涉及拉伸和弯曲主导的单位细胞,是为了将这种方法与文献中的其他替代方法进行比较。结果表明,与真实三维(3D)对象的均匀化方法相比,一维模拟具有可比性。对整个身体进行3D分析所需的计算能力急剧下降。
    Lightweight bioinspired structures are extremely interesting in industrial applications for their known advantages, especially when Additive Manufacturing technologies are used. Lattices are composed of axial elements called ligaments: several unit cells are repeated in three directions to form bodies. However, their inherent structure complexity leads to several problems when lattices need to be designed or numerically simulated. The computational power needed to capture the overall component is extremely high. For this reason, some alternative methodologies called homogenization methods were developed in the literature. However, following these approaches, the designers do not have a local visual overview of the lattice behavior, especially at the ligament level. For this reason, an alternative mono-dimensional (1D) modeling approach, called lattice-to-1D is proposed in this work. This method approximates the ligament element with its beam axis, uses the real material characteristics, and gives the cross-sectional information directly to the solver. Several linear elastic simulations, involving both stretching and bending dominated unit cells, are performed to compare this approach with other alternatives in the literature. The results show a comparable agreement of the 1D simulations compared with homogenization methods for real tridimensional (3D) objects, with a dramatic decrease of computational power needed for a 3D analysis of the whole body.
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