viral pathogens

病毒病原体
  • 文章类型: Journal Article
    心肌炎是一种罕见的心肌细胞炎症过程,通常由病毒引起,在竞技运动员和普通人群中都有潜在的破坏性心脏后遗症。对2019年冠状病毒病(COVID-19)时代心肌炎患病率的调查表明,严重急性呼吸综合征冠状病毒(SARS-CoV-2)感染是心肌炎的独立危险因素,这主要是通过心血管磁共振成像证实的。最近的研究表明,与普通人群相比,运动员在最近感染COVID-19后患心肌炎的风险降低。然而,鉴于竞技体育的独特性,他们经常参加高强度运动,运动员对心肌炎及其随后的严重心脏并发症的发展具有不同的易感性因素(例如,心源性猝死,暴发性心力衰竭,等。).在此背景下,这篇综述的重点是比较运动员与非运动员的心肌炎,由于特别注意由不同的病毒病原体如巨细胞病毒引起的心肌炎的不同临床表现和结果,爱泼斯坦-巴尔病毒,人类疱疹病毒-6,人类免疫缺陷病毒,和细小病毒B19,在COVID-19大流行之前和之后,与SARS-CoV-2相比。通过说明运动员与非运动员心肌炎的不同临床表现和结果,我们还强调了早期检测的重要性,警惕监测,以及对运动员病毒性和非病毒性心肌炎的有效管理,以及进一步优化COVID-19时代运动员重返赛场指南的必要性,以尽量减少罕见但毁灭性的心脏死亡的风险。
    Myocarditis is a rare cardiomyocyte inflammatory process, typically caused by viruses, with potentially devastating cardiac sequalae in both competitive athletes and in the general population. Investigation into myocarditis prevalence in the Coronavirus disease 2019 (COVID-19) era suggests that infection with Severe acute respiratory syndrome coronavirus (SARS-CoV-2) is an independent risk factor for myocarditis, which is confirmed mainly through cardiovascular magnetic resonance imaging. Recent studies indicated that athletes have a decreased risk of myocarditis after recent COVID-19 infection compared to the general population. However, given the unique nature of competitive athletics with their frequent participation in high-intensity exercise, athletes possess distinct factors of susceptibility for the development of myocarditis and its subsequent severe cardiac complications (e.g., sudden cardiac death, fulminant heart failure, etc.). Under this context, this review focuses on comparing myocarditis in athletes versus non-athletes, owing special attention to the distinct clinical presentations and outcomes of myocarditis caused by different viral pathogens such as cytomegalovirus, Epstein-Barr virus, human herpesvirus-6, human immunodeficiency virus, and Parvovirus B19, both before and after the COVID-19 pandemic, as compared with SARS-CoV-2. By illustrating distinct clinical presentations and outcomes of myocarditis in athletes versus non-athletes, we also highlight the critical importance of early detection, vigilant monitoring, and effective management of viral and non-viral myocarditis in athletes and the necessity for further optimization of the return-to-play guidelines for athletes in the COVID-19 era, in order to minimize the risks for the rare but devastating cardiac fatality.
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  • 文章类型: Journal Article
    Akahoya是富含氧化铝的火山土壤,主要沉积在九州,日本。我们发现Akahoya在牛放牧区周围的水中吸附细菌,暗示了环境净化的潜力。这项研究使用填充有Akahoya的色谱柱研究了Akahoya吸附的微生物的光谱,该色谱柱通过了微生物悬浮液。Shirasu土壤,另一种具有不同化学成分的火山土壤,被用作控制。Akahoya有效吸附了包括大肠杆菌在内的各种微生物,空肠弯曲杆菌,副溶血性弧菌,肠炎沙门氏菌,金黄色葡萄球菌,产气荚膜梭菌,枯草芽孢杆菌和炭疽芽孢杆菌的孢子,严重急性呼吸道综合征冠状病毒2(SARS-CoV-2),鼠诺如病毒,和禽流感病毒(H3N2),而Shirasu土壤没有吸附任何被检查的生物。此外,自然存在于河水中的细菌,比如需氧细菌,总大肠菌群,和肠杆菌科作为河流污染的指标,以及人工添加到消毒河水中的大肠杆菌,在通过Akahoya后降低至低于检测限(<1CFU/mL)。此外,与Akahoya接触1个月后,活大肠杆菌的数量继续减少,提示杀菌效果。值得注意的是,由于生物体的表面磷酸化与Akahoya的主要化学成分Al2O3之间的相互作用,大肠杆菌对Akahoya的吸附受磷酸盐浓度和悬浮液pH值的影响。目前的结果表明,Akahoya具有去除磷酸盐和微生物的显着能力,这表明Akahoya可以用于水净化过程。重要事项尽管安全和充足的供水对于保持卫生条件至关重要,一个主要的挑战是发展一种全面有效的,可持续,以及用于处理和净化污染水的具有成本效益的技术方法。在这项研究中,我们证明了一种新的火山土壤,Akahoya,它具有无限的可用性,是一种非常有效的吸附剂,用于广泛的细菌和病毒病原体,表明其作为可持续资源的潜力。有人提出,微生物在Akahoya上的吸附是由微生物表面结构上存在的磷酸基团介导的,根据液相的磷酸盐浓度和pH值与Akahoya的氧化铝组分结合。目前的发现突出了Akahoya在水净化过程中有效消除或减少磷酸盐和微生物的特殊能力,从而有助于开发有效和可持续的解决方案来应对水污染挑战。
    Akahoya is a volcanic soil rich in alumina, primarily deposited in Kyushu, Japan. We have found that Akahoya adsorbs bacteria in the water surrounding cattle grazing areas, suggesting a potential for environmental purification. This study investigated the spectrum of microorganisms adsorbed by Akahoya using a column filled with Akahoya through which a suspension of microorganisms was passed. Shirasu soil, another volcanic soil with a different chemical composition, was used as a control. Akahoya effectively adsorbed a diverse range of microorganisms including Escherichia coli, Campylobacter jejuni, Vibrio parahaemolyticus, Salmonella Enteritidis, Staphylococcus aureus, Clostridium perfringens, spores of Bacillus subtilis and Bacillus anthracis, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), murine norovirus, and avian influenza virus (H3N2), whereas Shirasu soil did not adsorb any of the organisms examined. Moreover, bacteria naturally present in river water, such as aerobic bacteria, total coliforms, and Enterobacteriaceae as indicators of river contamination, as well as E. coli added artificially to sterilized river water, were reduced to below the detection limit (<1 CFU/mL) after being passed through Akahoya. Additionally, the number of viable E. coli continued to decrease after contact with Akahoya for 1 month, suggesting bactericidal effects. Notably, the adsorption of E. coli to Akahoya was influenced by the concentration of phosphate and the pH of the suspension due to the interaction between the surface phosphorylation of organisms and Al2O3, the major chemical component of Akahoya. The present results demonstrate the remarkable ability of Akahoya to remove phosphate and microbes, suggesting that Akahoya could be used for water purification processes.IMPORTANCEAlthough a safe and sufficient water supply is essential for the maintenance of hygienic conditions, a major challenge is to develop a comprehensive effective, sustainable, and cost-effective technological approach for the treatment and purification of contaminated water. In this study, we demonstrated that a novel volcanic soil, Akahoya, which has unlimited availability, is a highly effective adsorbent for a wide range of bacterial and viral pathogens, suggesting its potential as a sustainable resource for this purpose. It was suggested that the adsorption of microorganisms on Akahoya was mediated by phosphate groups present on the surface structures of microorganisms, which bind to the alumina component of Akahoya according to the phosphate concentration and pH of the liquid phase. The present findings highlight the exceptional ability of Akahoya to eliminate or reduce phosphate and microorganisms effectively in water purification processes, thus contributing to the development of efficient and sustainable solutions for addressing water pollution challenges.
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  • 文章类型: Journal Article
    验证分子检测方法的包容性可以指示病毒感染诊断的可靠性,因为病毒病原体倾向于进行序列变异。这项研究旨在选择基于逆转录定量PCR(RT-qPCR)测定的包容性探针,以诊断感染蜜蜂的最广泛和有害的病毒。即急性蜜蜂麻痹病毒(ABPV),黑色女王细胞病毒(BQCV),慢性麻痹蜂病毒(CBPV),畸形机翼病毒变体A(DWVA)和B(DWVB),和镰刀病毒(SBV)。因此,之前描述的检测方法在计算机模拟中重新评估其特异性和包容性.基于这一评价,选择的方法进行了修改,或新的设计和测试在双重RT-qPCR反应。检测限(LODs),评估了多路复用对蜜蜂和蜂巢碎片中的敏感性和病毒RNA定量潜力的影响。与先前描述的测试和单个PCR反应中的两种病毒病原体相比,这项研究提供了能够检测到数量增加的病毒变体的诊断测定。
    Verifying the inclusivity of molecular detection methods gives indications about the reliability of viral infection diagnosis because of the tendency of viral pathogens to undergo sequence variation. This study was aimed at selecting inclusive probes based on reverse transcription-quantitative PCR (RT-qPCR) assays for the diagnosis of the most widespread and detrimental viruses infecting honeybees, namely the acute bee paralysis virus (ABPV), the black queen cell virus (BQCV), the chronic paralysis bee virus (CBPV), the deformed wing virus variants A (DWVA) and B (DWVB), and the sacbrood virus (SBV). Therefore, previously described detection methods were re-evaluated in silico for their specificity and inclusivity. Based on this evaluation, selected methods were modified, or new ones were designed and tested in duplex RT-qPCR reactions. The limits of detection (LODs), effect of multiplexing on sensitivity and the viral RNA quantification potential in bees and hive debris were assessed. This study made available diagnostic assays able to detect an increased number of virus variants compared with previously described tests and two viral pathogens in a single PCR reaction.
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  • 文章类型: Journal Article
    兔出血病病毒2(RHDV2)是一种高致病性的lagovirus,可在兔和野兔(lagomorphs)中引起致死性疾病。自2010年在欧洲首次发现以来,RHDV2已在全球范围内传播,迄今已在35个国家/地区检测到。这里,我们提供了有关RHDV2在新西兰的检测和后续流通的第一份详细报告.RHDV2于2018年在新西兰首次检测到,2017年12月回顾性鉴定出阳性样本。随后的时间分辨系统发育分析表明,在2016年3月至11月之间,北岛有一次引入。遗传分析确定了GI.3P-GI.2变体,支持入侵的非澳大利亚起源;但是,由于GI.3P-GI.2变体在全球范围内分布广泛,因此更准确地识别入侵源仍然具有挑战性.此外,我们的分析表明,该病毒在新西兰的南北群岛之间传播了至少两次,可追溯到2017年年中和2018年左右。进一步的系统发育分析也揭示了强烈的系统地理格局。到目前为止,尚未发现与地方性良性新西兰兔杯状病毒的重组事件。这项研究强调了进一步研究和监测的必要性,以监测新西兰泻湖病毒的分布和多样性,并检测新变种的入侵。
    Rabbit haemorrhage disease virus 2 (RHDV2) is a highly pathogenic lagovirus that causes lethal disease in rabbits and hares (lagomorphs). Since its first detection in Europe in 2010, RHDV2 has spread worldwide and has been detected in over 35 countries so far. Here, we provide the first detailed report of the detection and subsequent circulation of RHDV2 in New Zealand. RHDV2 was first detected in New Zealand in 2018, with positive samples retrospectively identified in December 2017. Subsequent time-resolved phylogenetic analysis suggested a single introduction into the North Island between March and November 2016. Genetic analysis identified a GI.3P-GI.2 variant supporting a non-Australian origin for the incursion; however, more accurate identification of the source of the incursion remains challenging due to the wide global distribution of the GI.3P-GI.2 variant. Furthermore, our analysis suggests the spread of the virus between the North and South Islands of New Zealand at least twice, dated to mid-2017 and around 2018. Further phylogenetic analysis also revealed a strong phylogeographic pattern. So far, no recombination events with endemic benign New Zealand rabbit caliciviruses have been identified. This study highlights the need for further research and surveillance to monitor the distribution and diversity of lagoviruses in New Zealand and to detect incursions of novel variants.
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  • 文章类型: Journal Article
    由病毒或细菌引起的呼吸系统疾病,无论是单独还是组合,对全球养猪业造成巨大的经济负担。快速可靠地检测病原体对于有效的流行病学监测和疾病管理至关重要。这项研究旨在采用多重连接依赖性探针扩增(MLPA)测定法同时检测引起猪呼吸问题的七种不同病原体。猪繁殖与呼吸综合征病毒(PRRSV),猪流感病毒(SIV),猪呼吸道冠状病毒(PRCV),猪圆环病毒2型(PCV2),多杀性巴氏杆菌,胸膜肺炎放线杆菌,和小格莱拉。结果表明七种靶试剂与其他猪病原体之间没有探针交叉反应性。对于靶生物体,每个测定的检测限为5至34个拷贝。用88个样品评估MLPA测定,并与靶病原体的实时或多重PCR进行比较。MLPA分析显示出高的相对测试灵敏度(100%)和合理的良好的相对特异性在62.5%,95.1%,86.8%,PRRSV为97.6%,P.multocida,G.parasuis,和PCV2,分别,相对于比较PCR测定。在72个MLPA和比较PCR检测完全匹配的样本中,在65个样本(90%)中检测到感染,PRRSV是最常见的病毒,50%的样本显示与2至5种病原体共感染。这种方法是进行猪种群内病原体流行的鉴别诊断和流行病学调查的有价值的工具。
    Respiratory diseases due to viral or bacterial agents, either alone or in combination, cause substantial economic burdens to the swine industry worldwide. Rapid and reliable detection of causal pathogens is crucial for effective epidemiological surveillance and disease management. This research aimed to employ the multiplex ligation-dependent probe amplification (MLPA) assay for simultaneous detection of seven distinct pathogens causing respiratory problems in swine, porcine reproductive and respiratory syndrome virus (PRRSV), swine influenza virus (SIV), porcine respiratory coronavirus (PRCV), porcine circovirus type 2 (PCV2), Pasteurella multocida, Actinobacillus pleuropneumoniae, and Glässerella parasuis. The results indicated no probe cross-reactivity among the seven target agents with other swine pathogens. The detection limits ranged from 5 to 34 copies per assay for the target organisms. The MLPA assay was evaluated with 88 samples and compared to real-time or multiplex PCR for the target pathogens. The MLPA assay demonstrated high relative test sensitivities (100 %) and reasonable to good relative specificities at 62.5 %, 95.1 %, 86.8 %, and 97.6 % for PRRSV, P. multocida, G. parasuis, and PCV2, respectively, relative to comparator PCR assays. In 71 samples where MLPA and comparator PCR assays matched exactly, infections were detected in 64 samples (90.1 %), with PRRSV being the most commonly found virus and 50.7 % of the samples showing co-infection with two to five of the pathogens. This approach serves as a valuable tool for conducting differential diagnoses and epidemiological investigations of pathogen prevalence within swine populations.
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  • 文章类型: Journal Article
    致病性lagovirus(兔出血性疾病病毒,RHDV)在世界各地广泛传播,并在澳大利亚和新西兰用于控制野生欧洲兔的种群。非致病性流感病毒的传播,例如,兔杯状病毒(RCV),由于感染没有临床症状,因此研究较少。尽管如此,RCV对RHDV的传播和兔生物控制具有重要意义,因为它可以提供不同水平的交叉保护,以抵抗致病性泻湖病毒的致命感染。在智利,欧洲兔子也是引进的物种,在1950年代,粘液瘤病毒被用于兔子的局部生物防治。迄今为止,目前尚无研究调查智利野兔种群中存在的泻湖病毒。在这项研究中,对来自智利中部的肝脏和十二指肠兔样本进行了lago病毒检测,阳性样本进行了全RNA测序和随后的数据分析.系统发育分析揭示了十二指肠样品中的新型RCV变体,该变体可能源自欧洲RCV。测序分析还检测到在一个lagovirus阳性样品中存在兔星状病毒。
    Pathogenic lagoviruses (Rabbit hemorrhagic disease virus, RHDV) are widely spread across the world and are used in Australia and New Zealand to control populations of feral European rabbits. The spread of the non-pathogenic lagoviruses, e.g., rabbit calicivirus (RCV), is less well studied as the infection results in no clinical signs. Nonetheless, RCV has important implications for the spread of RHDV and rabbit biocontrol as it can provide varying levels of cross-protection against fatal infection with pathogenic lagoviruses. In Chile, where European rabbits are also an introduced species, myxoma virus was used for localised biocontrol of rabbits in the 1950s. To date, there have been no studies investigating the presence of lagoviruses in the Chilean feral rabbit population. In this study, liver and duodenum rabbit samples from central Chile were tested for the presence of lagoviruses and positive samples were subject to whole RNA sequencing and subsequent data analysis. Phylogenetic analysis revealed a novel RCV variant in duodenal samples that likely originated from European RCVs. Sequencing analysis also detected the presence of a rabbit astrovirus in one of the lagovirus-positive samples.
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  • 文章类型: Journal Article
    2019年冠状病毒病(COVID-19)大流行开始并在世界各地蔓延的性质让专家和普通民众都感到惊讶和震惊。这引起了全世界的渴望和认真的努力,或者至少减少,另一种空气传播病毒感染的严重程度,并保护因各种原因聚集的个体。为了这个主要目的,一种新的空气消毒方法,使用分级,可预测的,安全,和可靠的紫外线C(UVC)剂量,特别设计的设备,在这里描述。个人只呼吸这种消毒过的空气可以预防感染,从而消灭人体外部的空气传播病毒或任何其他病原体,以防止对器官的急性和慢性损害,并提供聚集的安全感,使用公共交通工具,并在急性和长期医疗机构中得到保护。该研究涉及设计和测试一个带有一个UVC室的单元和另一个带有六个UVC室的单元,这两个单元都封闭在UVC不透明的外壳中,可用于消灭空气中的病原体。使用野生型严重急性呼吸综合征冠状病毒2(SARS-CoV-2)作为代表性病原体。病毒被送入这些单位和两个单位,病毒被破坏到无法检测到的水平。这样的消毒空气可以在个体和社区水平上提供给个体呼吸。被研究的两个单位能够在UVC不透明的外壳中完全消灭SARS-CoV-2病毒,使它们对人类使用安全。通过利用空气将病毒带到UVC,避免了病毒在建筑物后面受到保护的问题。个体通过面罩或呼吸机呼吸完全消毒的空气。为了保护不能或不愿意使用这些供个人使用的单位的个人,同样的原理可以扩展到与空调一起使用,以提供社区保护。据设想,这种方法可以防止空气传播感染演变成大流行,是倡导预防的一个明显例子,而不是治疗。这些单位是可扩展的,病原体的UVC剂量可以调整和预测,从而使其成为研究灭活不同病原体所需剂量的标准技术。
    The nature in which the coronavirus disease 2019 (COVID-19) pandemic started and spread all over the world has surprised and shocked experts and the general population alike. This has brought out a worldwide desire and serious efforts to prevent, or at least reduce, the severity of another airborne viral infection and protect individuals gathering for various reasons. Toward this main purpose, a novel method to disinfect the air, using graded, predictable, safe, and reliable dosage of ultraviolet C (UVC), with specially designed devices, is described here. Individuals exclusively breathing this disinfected air can prevent infection, thus destroying the airborne virus or any other pathogens outside the human body to prevent acute and chronic damage to the organs and provide a sense of security to congregate, use public transport, and be protected in acute and long-term healthcare facilities. The study involved designing and testing a unit with one UVC chamber and another unit with six UVC chambers both enclosed in UVC-opaque housings that could be used to destroy airborne pathogens. Wild-type severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was used as a representative pathogen. The virus was fed into these units and in both units, the virus was destroyed to undetectable levels. Such disinfected air can be made available for individuals to breathe at an individual and a community level. The two units that were studied were able to destroy the SARS-CoV-2 virus completely in UVC-opaque housings, making them safe for human use. By employing the air to bring the virus to the UVC, the problem of the virus getting protected behind structures was avoided. The individuals get to breathe totally disinfected air through a mask or a ventilator. To protect individuals who are unable or unwilling to use these units meant for individual use, the same principle can be expanded for use with air conditioners to provide community protection. It is envisaged that this method can prevent airborne infections from turning into pandemics and is a clear example of advocating prevention, rather than treatment. These units are expandable and the UVC dosage to the pathogen can be adjusted and predictable, thereby making it a standard technique to study the dosage needed to inactivate different pathogens.
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  • 文章类型: Journal Article
    这项研究的目的是评估年度,荷兰单纯性和复杂性阑尾炎患儿的季节性和月度趋势及其与常见病毒病原体的相关性。在2010年至2019年之间进行了一项连续的多中心回顾性队列研究,包括接受阑尾炎手术治疗的儿童(<18岁)。主要结果是每年单纯性和复杂性阑尾炎患儿的分布,季节和月份。相关季节变化定义为≥5%。次要结果是简单和复杂阑尾炎患者数量与常见病毒病原体呈正相关(数据由荷兰临床微生物学会(NVMM)的荷兰临床病毒学工作组匿名提供)。总的来说,包括896例患者:N=524(58%)单纯阑尾炎患者和N=372(42%)复杂阑尾炎患者。在0-5岁的儿童中,81%患有复杂阑尾炎,6-18年为38%(p<0.001)。在2010年至2019年之间,简单和复杂阑尾炎的总体下降。单纯性阑尾炎没有发现季节性变化。对于复杂的阑尾炎,患者数量最多的是在春季,夏季最低(N=372,春季28.2±5.1%,夏季21.0±5.8%,p=0.011),但差异被认为不相关(与基线相比<5%)。发现复杂阑尾炎与腺病毒40.41(R=0.356,95CI0.045-0.604,p=0.026)和单纯性阑尾炎与腺病毒NON40.41(R=0.332,95CI0.019-0.586,p=0.039)之间呈正相关,但在Bonferroni校正后,这些相关性并不显著(p<0.003)。总之,我们没有发现简单或复杂阑尾炎的相关季节变化,与常见的病毒病原体也没有正相关性。
    The aim of this study was to evaluate the annual, seasonal and monthly trends in children with simple and complex appendicitis and their correlation to common viral pathogens in the Netherlands. A consecutive multicenter retrospective cohort study was performed between 2010 and 2019 including children (<18 years) surgically treated for appendicitis. The primary outcome was the distribution of children with simple and complex appendicitis per year, season and month. Relevant seasonal variation was defined as ≥5%. The secondary outcome was a positive correlation of the number of patients with simple and complex appendicitis to common viral pathogens (data anonymously provided by the Dutch Working Group on Clinical Virology from the Dutch Society for Clinical Microbiology (NVMM)). In total, 896 patients were included: N = 524 (58%) patients with simple and N = 372 (42%) with complex appendicitis. Of the children aged 0-5 years, 81% had complex appendicitis, versus 38% in 6-18 years (p < 0.001). An overall decline was demonstrated for both simple and complex appendicitis between 2010 and 2019. No seasonal variation was found for simple appendicitis. For complex appendicitis, the highest number of patients was found in spring, and lowest in summer (N = 372, spring 28.2 ± 5.1% versus summer 21.0 ± 5.8%, p = 0.011), but the variance was regarded as not relevant (<5% from baseline). A positive correlation was found between complex appendicitis with Adenovirus 40.41 (R = 0.356, 95%CI 0.045-0.604, p = 0.026) and simple appendicitis with Adenovirus NON 40.41 (R = 0.332, 95%CI 0.019-0.586, p = 0.039), but these correlations did not remain significant after a Bonferroni correction (p < 0.003). In conclusion, we found no relevant seasonal variation for simple or complex appendicitis, nor positive correlation with common viral pathogens.
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  • 文章类型: Journal Article
    高风险人乳头瘤病毒(HR-HPV)在肛门生殖器和口咽区域引起各种恶性肿瘤。大约70%的宫颈癌和口咽癌是由16型和18型HPV引起的。值得注意的是,一些病毒包括单纯疱疹病毒,爱泼斯坦-巴尔病毒,和人类免疫缺陷病毒以及各种细菌经常与HPV相互作用,可能会影响其复制,持久性,和癌症进展。因此,HPV感染可受到影响感染动态和疾病进展的共感染剂的显著影响。细菌共感染(例如,沙眼衣原体)以及与细菌性阴道病相关的物种也与生殖道中的HPV相互作用,导致病毒持久性和疾病结局。涉及HPV和多种感染因子的共感染对疾病传播和临床进展具有重要意义。这篇综述探讨了HPV感染的多个方面,包括与其他病原体的共感染动力学,与人类微生物组的相互作用,及其在疾病发展中的作用。
    High-risk human papillomaviruses (HR-HPVs) cause various malignancies in the anogenital and oropharyngeal regions. About 70% of cervical and oropharyngeal cancers are caused by HPV types 16 and 18. Notably, some viruses including herpes simplex virus, Epstein-Barr virus, and human immunodeficiency virus along with various bacteria often interact with HPV, potentially impacting its replication, persistence, and cancer progression. Thus, HPV infection can be significantly influenced by co-infecting agents that influence infection dynamics and disease progression. Bacterial co-infections (e.g., Chlamydia trachomatis) along with bacterial vaginosis-related species also interact with HPV in genital tract leading to viral persistence and disease outcomes. Co-infections involving HPV and diverse infectious agents have significant implications for disease transmission and clinical progression. This review explores multiple facets of HPV infection encompassing the co-infection dynamics with other pathogens, interaction with the human microbiome, and its role in disease development.
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  • 文章类型: Journal Article
    背景:啮齿动物与人类的频繁相互作用使它们成为人畜共患感染的常见来源。勃兰特田鼠是内蒙古典型草原的优势鼠种,它也是草原上的一种重要害虫。
    目的:为了获得对血液和肠道中微生物多样性和丰度的初步无偏测量,并检测呼伦贝尔野生勃兰特田鼠携带的病原体,内蒙古。
    方法:使用活笼诱捕20只野生成年勃兰特田鼠,收集12份肠道样本进行宏基因组分析,收集8份血液样本进行meta转录组分析.我们将测序数据与病原微生物群数据库进行了比较,以分析野生田鼠携带的人畜共患病原体的系统发育特征。
    结果:总共122门,79个班级,168个订单,对Brandt田鼠中382个家族和1693个属的细菌以及总共32个家族的DNA和RNA病毒进行了表征。我们发现每个样本都携带10多种病原体,而一些丰度较低的病原体仍有传播给人类的风险。
    结论:这项研究提高了我们对野生勃兰特田鼠的病毒和细菌多样性的理解,并强调了这种啮齿动物携带的多种病毒和细菌病原体。这些发现可以作为制定针对呼伦贝尔啮齿动物种群控制策略的基础,并为野生动植物病原微生物的监测提供更好的方法。
    The frequent interactions of rodents with humans make them a common source of zoonotic infections. Brandt\'s vole is the dominant rodent species of the typical steppe in Inner Mongolia, and it is also an important pest in grassland.
    To obtain an initial unbiased measure of the microbial diversity and abundance in the blood and intestinal tracts and to detect the pathogens carried by wild Brandt\'s voles in Hulun Buir, Inner Mongolia.
    Twenty wild adult Brandt\'s voles were trapped using live cages, and 12 intestinal samples were collected for metagenomic analysis and 8 blood samples were collected for meta-transcriptomic analysis. We compared the sequencing data with pathogenic microbiota databases to analyse the phylogenetic characteristics of zoonotic pathogens carried by wild voles.
    A total of 122 phyla, 79 classes, 168 orders, 382 families and 1693 genera of bacteria and a total of 32 families of DNA and RNA viruses in Brandt\'s voles were characterized. We found that each sample carried more than 10 pathogens, whereas some pathogens that were low in abundance were still at risk of transmission to humans.
    This study improves our understanding of the viral and bacterial diversity in wild Brandt\'s voles and highlights the multiple viral and bacterial pathogens carried by this rodent. These findings may serve as a basis for developing strategies targeting rodent population control in Hulun Buir and provide a better approach to the surveillance of pathogenic microorganisms in wildlife.
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