ubiquitylation (ubiquitination)

泛素化 ( 泛素化 )
  • 文章类型: Journal Article
    人DNA聚合酶1(Pol1)属于参与对维持基因组完整性至关重要的跨损伤DNA合成的DNA损伤耐受途径的专门DNA聚合酶Y家族。Pol1的极端不忠以及其上调和下调与各种癌症相关的事实表明,Pol1的表达和对复制叉的访问应受到严格控制。这里,我们鉴定了RNF2,一种E3泛素连接酶,作为Poli的新相互作用伴侣,负责体内Poli的稳定。有趣的是,虽然我们报道RNF2不会直接泛素化Poli,抑制RNF2的E3泛素连接酶活性会影响Poli的细胞水平,从而保护其免于不稳定。此外,我们表明这种机制更普遍,作为DNA聚合酶η,另一个Y家族聚合酶和Poli最接近的旁系,分享相似的特征。
    Human DNA polymerase ι (Polι) belongs to the Y-family of specialized DNA polymerases engaged in the DNA damage tolerance pathway of translesion DNA synthesis that is crucial to the maintenance of genome integrity. The extreme infidelity of Polι and the fact that both its up- and down-regulation correlate with various cancers indicate that Polι expression and access to the replication fork should be strictly controlled. Here, we identify RNF2, an E3 ubiquitin ligase, as a new interacting partner of Polι that is responsible for Polι stabilization in vivo. Interestingly, while we report that RNF2 does not directly ubiquitinate Polι, inhibition of the E3 ubiquitin ligase activity of RNF2 affects the cellular level of Polι thereby protecting it from destabilization. Additionally, we indicate that this mechanism is more general, as DNA polymerase η, another Y-family polymerase and the closest paralogue of Polι, share similar features.
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  • 文章类型: Journal Article
    蛋白质泛素化是调节真核细胞生物学几乎所有方面的必需翻译后修饰。各种各样的泛素化信号集合,包括广泛的聚合物泛素链,导致一系列不同的功能结果的目标蛋白。最近的研究表明,泛素链可以是分支的,并且支链对它们所连接的靶蛋白的稳定性或活性有直接影响。在这个迷你评论中,我们讨论了通过泛素化和去泛素化机制的酶控制支链的组装和分解的机制。总结了有关链分支泛素连接酶和负责裂解支链的去泛素化酶的活性的现有知识。我们还强调了关于响应于诱导其他稳定蛋白质降解的小分子而形成支链的新发现,并检查了蛋白酶体结合的去泛素酶UCH37对异型链的选择性脱支。
    Protein ubiquitylation is an essential post-translational modification that regulates nearly all aspects of eukaryotic cell biology. A diverse collection of ubiquitylation signals, including an extensive repertoire of polymeric ubiquitin chains, leads to a range of different functional outcomes for the target protein. Recent studies have shown that ubiquitin chains can be branched and that branched chains have a direct impact on the stability or the activity of the target proteins they are attached to. In this mini review, we discuss the mechanisms that control the assembly and disassembly of branched chains by the enzymes of the ubiquitylation and deubiquitylation machinery. Existing knowledge regarding the activities of chain branching ubiquitin ligases and the deubiquitylases responsible for cleaving branched chains is summarized. We also highlight new findings concerning the formation of branched chains in response to small molecules that induce the degradation of otherwise stable proteins and examine the selective debranching of heterotypic chains by the proteasome-bound deubiquitylase UCH37.
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  • 文章类型: Journal Article
    在抗微管药物诱导的长时间有丝分裂停滞期间,细胞命运的决定是由两个替代途径,一个导致细胞死亡的,另一种是通过有丝分裂滑移诱导过早脱离有丝分裂。FBWX7是F-box蛋白家族的成员和SCF(SKP1-CUL1-F-Box)E3泛素连接酶复合物的底物靶向亚基,可促进有丝分裂细胞死亡并防止有丝分裂滑动,但FBWX7发挥这些作用的分子细节尚不清楚.在这项研究中,我们报道了WDR5,组蛋白3赖氨酸4(H3K4)甲基转移酶的混合谱系白血病(MLL)复合物的组成部分,是FBXW7的底物。我们通过共免疫沉淀实验和体外结合测定确定WDR5在体内和体外与FBXW7相互作用。SCF-FBXW7介导WDR5的泛素化并靶向其用于蛋白酶体降解。此外,我们发现WDR5耗竭通过减少有丝分裂滑移和多倍体化来抵消FBXW7功能丧失。总之,我们的数据阐明了有丝分裂细胞命运调节的新机制,该机制可能有助于预防抗微管药物治疗后患者的化疗耐药.
    During prolonged mitotic arrest induced by antimicrotubule drugs, cell fate decision is determined by two alternative pathways, one leading to cell death and the other inducing premature escape from mitosis by mitotic slippage. FBWX7, a member of the F-box family of proteins and substrate-targeting subunit of the SKP1-CUL1-F-Box E3 ubiquitin ligase complex, promotes mitotic cell death and prevents mitotic slippage, but molecular details underlying these roles for FBWX7 are unclear. In this study, we report that WDR5 (WD-repeat containing protein 5), a component of the mixed lineage leukemia complex of histone 3 lysine 4 methyltransferases, is a substrate of FBXW7. We determined by coimmunoprecipitation experiments and in vitro binding assays that WDR5 interacts with FBXW7 in vivo and in vitro. SKP1-CUL1-F-Box-FBXW7 mediates ubiquitination of WDR5 and targets it for proteasomal degradation. Furthermore, we find that WDR5 depletion counteracts FBXW7 loss of function by reducing mitotic slippage and polyploidization. In conclusion, our data elucidate a new mechanism in mitotic cell fate regulation, which might contribute to prevent chemotherapy resistance in patients after antimicrotubule drug treatment.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    翻译后修饰,比如泛素化,需要严格控制,以保证蛋白质的准确定位和活性。泛素化是一个动态过程,主要负责蛋白酶体介导的底物蛋白降解,对正常的稳态和疾病至关重要。泛素化的改变导致癌蛋白的上调和/或肿瘤抑制因子的下调,因此在肿瘤发生中一致。PROteinsolution-Togeting嵌合体(PROTAC)是一种利用细胞自身的泛素-蛋白酶体系统(UPS)的创新策略。每个PROTAC分子由一个配体组成,该配体募集感兴趣的靶蛋白(POI),一种对E3泛素连接酶特异的配体,和连接这些单元的链接器。在绑定到POI时,PROTAC募集E3诱导POI的泛素化依赖性蛋白酶体降解。迄今为止,PROTAC技术已进入几种人类癌症的临床试验。这里,我们将讨论PROTACs开发的优势和局限性以及其临床应用的安全性考虑。此外,我们将回顾PROTAC策略作为脑肿瘤治疗选择的潜力,专注于胶质母细胞瘤。
    Post-translational modifications, such as ubiquitylation, need to be tightly controlled to guarantee the accurate localization and activity of proteins. Ubiquitylation is a dynamic process primarily responsible for proteasome-mediated degradation of substrate proteins and crucial for both normal homeostasis and disease. Alterations in ubiquitylation lead to the upregulation of oncoproteins and/or downregulation of tumor suppressors, thus concurring in tumorigenesis. PROteolysis-TArgeting Chimera (PROTAC) is an innovative strategy that takes advantage by the cell\'s own Ubiquitin-Proteasome System (UPS). Each PROTAC molecule is composed by a ligand that recruits the target protein of interest (POI), a ligand specific for an E3 ubiquitin ligase enzyme, and a linker that connects these units. Upon binding to the POI, the PROTAC recruits the E3 inducing ubiquitylation-dependent proteasome degradation of the POI. To date, PROTAC technology has entered in clinical trials for several human cancers. Here, we will discuss the advantages and limitations of PROTACs development and safety considerations for their clinical application. Furthermore, we will review the potential of PROTAC strategy as therapeutic option in brain tumor, focusing on glioblastoma.
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  • 文章类型: Editorial
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  • 文章类型: Journal Article
    嗜肺军团菌是一种兼性细胞内病原体,它使用Dot/IcmIV型分泌系统(T4SS)将许多效应子转移到其宿主中,并建立了安全的,复制的生活方式。细菌,一旦被吞噬,位于宿主细胞内的液泡结构中,称为含军团菌的液泡(LCV),并迅速颠覆细胞器运输事件,阻断炎症反应,劫持宿主泛素化系统,并废除凋亡信号。这种易位效应物的武器库可以以多种不同的方式操纵宿主因子。这些蛋白质还通过正向或负向调节彼此的活性而有助于细菌毒力。这种效应-效应相互作用,直接和间接,提供维持细胞稳态所需的微妙平衡,同时在宿主内建立自身。这篇综述总结了我们对军团菌中彼此相反工作的精选效应对的结构-功能关系和生化机制的知识的最新进展。同时强调了这种细胞内病原体在宿主细胞内建立复制性生态位所采用的生化手段的多样性。
    Legionella pneumophila is a facultative intracellular pathogen that uses the Dot/Icm Type IV secretion system (T4SS) to translocate many effectors into its host and establish a safe, replicative lifestyle. The bacteria, once phagocytosed, reside in a vacuolar structure known as the Legionella-containing vacuole (LCV) within the host cells and rapidly subvert organelle trafficking events, block inflammatory responses, hijack the host ubiquitination system, and abolish apoptotic signaling. This arsenal of translocated effectors can manipulate the host factors in a multitude of different ways. These proteins also contribute to bacterial virulence by positively or negatively regulating the activity of one another. Such effector-effector interactions, direct and indirect, provide the delicate balance required to maintain cellular homeostasis while establishing itself within the host. This review summarizes the recent progress in our knowledge of the structure-function relationship and biochemical mechanisms of select effector pairs from Legionella that work in opposition to one another, while highlighting the diversity of biochemical means adopted by this intracellular pathogen to establish a replicative niche within host cells.
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  • 文章类型: Journal Article
    RAS是GTPasesRAS超家族的创始成员。这些21kDa的小蛋白充当分子开关,以初始化参与各种细胞过程的信号级联,包括基因表达,细胞生长,和差异化。RAS通过GTP加载而活化,并在GTP水解为GDP时失活。鸟嘌呤核苷酸交换因子(GEF)和GTP酶激活蛋白(GAP)加速GTP负载和水解,分别。这些辅助蛋白通过保守的鸟嘌呤结合(G)-结构域在调节RAS超家族小GTP酶的活性中起着重要作用,由五个G图案组成。开关区域位于G2和G3基序内或附近,并在GDP约束的“OFF”状态和GTP约束的“ON”状态之间发生动态构象变化。它们在识别调节因子(GEF和GAP)和效应因子中起着重要作用。G4和G5主题是当前工作的重点,位于Switch区域之外。这些基序负责识别GTP和GDP中的鸟嘌呤部分,并且包含经过翻译后修饰的残基,这些残基是RAS调控的新机制的基础。G4和G5基序内的翻译后修饰通过填充GTP结合的“ON”状态激活RAS,通过增强内在鸟嘌呤核苷酸交换或损害GAP介导的下调。这里,我们对RASG4和G5基序的翻译后修饰进行了全面审查,并描述了这些修饰在RAS激活中的作用以及在癌症治疗中的潜在应用。
    RAS is a founding member of the RAS superfamily of GTPases. These small 21 kDa proteins function as molecular switches to initialize signaling cascades involved in various cellular processes, including gene expression, cell growth, and differentiation. RAS is activated by GTP loading and deactivated upon GTP hydrolysis to GDP. Guanine nucleotide exchange factors (GEFs) and GTPase-activating proteins (GAPs) accelerate GTP loading and hydrolysis, respectively. These accessory proteins play a fundamental role in regulating activities of RAS superfamily small GTPase via a conserved guanine binding (G)-domain, which consists of five G motifs. The Switch regions lie within or proximal to the G2 and G3 motifs, and undergo dynamic conformational changes between the GDP-bound \"OFF\" state and GTP-bound \"ON\" state. They play an important role in the recognition of regulatory factors (GEFs and GAPs) and effectors. The G4 and G5 motifs are the focus of the present work and lie outside Switch regions. These motifs are responsible for the recognition of the guanine moiety in GTP and GDP, and contain residues that undergo post-translational modifications that underlie new mechanisms of RAS regulation. Post-translational modification within the G4 and G5 motifs activates RAS by populating the GTP-bound \"ON\" state, either through enhancement of intrinsic guanine nucleotide exchange or impairing GAP-mediated down-regulation. Here, we provide a comprehensive review of post-translational modifications in the RAS G4 and G5 motifs, and describe the role of these modifications in RAS activation as well as potential applications for cancer therapy.
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  • 文章类型: Journal Article
    肾远曲小管(DCT)中的噻嗪敏感性氯化钠共转运蛋白(NCC)在调节血压(BP)和K稳态中起着至关重要的作用。在高钾血症期间,减少的NCC磷酸化和总NCC丰度促进下游电K分泌和BP减少。然而,K+依赖性降低总NCC水平的机制尚不清楚。这里,我们显示,NCC水平在体外肾小管中降低,在高K+培养基中孵育24-48小时。这种降低与NCC转录无关,但使用蛋白酶体(MG132)或溶酶体(氯喹)的抑制剂被阻止。离体,高K+增加NCC泛素化,但是抑制泛素偶联途径阻止了高K+介导的NCC蛋白的减少。在体外在高K培养基中孵育的小管中或在高K饮食喂养4天的小鼠的肾皮质中,热休克蛋白70(Hsp70)的丰度和磷酸化,泛素依赖性蛋白质降解和蛋白质折叠的关键调节因子,减少了。相反,在类似的样本中,PP1α的表达,已知去磷酸化Hsp70,也增加。NCC与Hsp70和PP1α共免疫沉淀,并抑制其作用可防止高K介导的总NCC水平降低。总之,我们表明高钾血症通过Hsp70促进的PP1α依赖性过程驱动NCC泛素化和降解。该机制促进NCC的K依赖性降低以保护血浆K稳态并潜在地降低BP。
    The thiazide-sensitive sodium-chloride cotransporter (NCC) in the renal distal convoluted tubule (DCT) plays a critical role in regulating blood pressure (BP) and K+ homeostasis. During hyperkalemia, reduced NCC phosphorylation and total NCC abundance facilitate downstream electrogenic K+ secretion and BP reduction. However, the mechanism for the K+-dependent reduction in total NCC levels is unknown. Here, we show that NCC levels were reduced in ex vivo renal tubules incubated in a high-K+ medium for 24-48 h. This reduction was independent of NCC transcription, but was prevented using inhibitors of the proteasome (MG132) or lysosome (chloroquine). Ex vivo, high K+ increased NCC ubiquitylation, but inhibition of the ubiquitin conjugation pathway prevented the high K+-mediated reduction in NCC protein. In tubules incubated in high K+ media ex vivo or in the renal cortex of mice fed a high K+ diet for 4 days, the abundance and phosphorylation of heat shock protein 70 (Hsp70), a key regulator of ubiquitin-dependent protein degradation and protein folding, were decreased. Conversely, in similar samples the expression of PP1α, known to dephosphorylate Hsp70, was also increased. NCC coimmunoprecipitated with Hsp70 and PP1α, and inhibiting their actions prevented the high K+-mediated reduction in total NCC levels. In conclusion, we show that hyperkalemia drives NCC ubiquitylation and degradation via a PP1α-dependent process facilitated by Hsp70. This mechanism facilitates K+-dependent reductions in NCC to protect plasma K+ homeostasis and potentially reduces BP.
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