translational medical research

转化医学研究
  • 文章类型: Editorial
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  • 文章类型: Journal Article
    使用患者来源的抗CD19嵌合抗原受体(CAR)T细胞治疗恶性血液病已证明对患有其他治疗难治性晚期白血病和淋巴瘤的患者具有长期缓解作用。相反,实体肿瘤的CAR-T细胞治疗,包括晚期胃癌(GC),由于目标外肿瘤毒性,已被证明更具挑战性,肿瘤T细胞浸润不良,低效的CAR-T细胞扩增,免疫抑制肿瘤微环境,和要求预处理方案。我们报告了自体Claudin18.2靶向CART细胞(CT041)在转移性GC患者中的异常结果,他在四组联合全身化疗和免疫疗法方面取得了进展。两次CT041输注后,患者有靶病变完全缓解,持续8个月总体部分缓解,仅有少量腹水.此外,肿瘤知情的循环肿瘤DNA(ctDNA)减少与CAR-T细胞快速扩增和放射学应答同时发生.没有发生严重的毒性,患者的生活质量明显改善。这种经验支持通过CART细胞疗法靶向Claudin18.2阳性GC,并有助于验证ctDNA作为CART细胞疗法中的生物标志物。临床见解:Claudin18.2靶向的CART细胞可以安全地提供完整的客观和ctDNA反应,以挽救转移性GC。
    Treatment of hematologic malignancies with patient-derived anti-CD19 chimeric antigen receptor (CAR) T-cells has demonstrated long-term remissions for patients with otherwise treatment-refractory advanced leukemia and lymphoma. Conversely, CAR T-cell treatment of solid tumors, including advanced gastric cancer (GC), has proven more challenging due to on-target off-tumor toxicities, poor tumor T-cell infiltration, inefficient CAR T-cell expansion, immunosuppressive tumor microenvironments, and demanding preconditioning regimens. We report the exceptional results of autologous Claudin18.2-targeted CAR T cells (CT041) in a patient with metastatic GC, who had progressed on four lines of combined systemic chemotherapy and immunotherapy. After two CT041 infusions, the patient had target lesion complete response and sustained an 8-month overall partial response with only minimal ascites. Moreover, tumor-informed circulating tumor DNA (ctDNA) reductions coincided with rapid CAR T-cell expansion and radiologic response. No severe toxicities occurred, and the patient\'s quality of life significantly improved. This experience supports targeting Claudin18.2-positive GC with CAR T-cell therapy and helps to validate ctDNA as a biomarker in CAR T-cell therapy. Clinical Insight: Claudin18.2-targeted CAR T cells can safely provide complete objective and ctDNA response in salvage metastatic GC.
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  • 文章类型: Journal Article
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  • 文章类型: Journal Article
    目的:使用条件重编程(CR)建立和表征头颈部鳞状细胞癌(HNSCC)培养物的多样化文库。
    方法:患者参加了IRB批准的方案,以使用CR方法产生肿瘤细胞培养物。收集肿瘤和血液样本并记录临床信息。成功的CR培养物针对具有短串联重复基因分型的库存参考肿瘤进行了验证。细胞形态学用照片记录存档。评估临床和人口统计学因素与成功建立CR文化的关联。人乳头瘤病毒(HPV)基因分型,克隆生存,MTT测定,球体生长,在选定的培养物中进行全外显子组测序。
    结果:纳入了44例患者,31(70%)成功的CR文化,32%来自确定为黑人的患者,61%来自西班牙裔。所有主要的头颈部疾病部位都有代表,包括15例(48%)口腔癌和8例(26%)p16阳性口咽癌。西班牙裔种族和第一原发性肿瘤(vs.第二原发或复发性肿瘤)与成功的CR培养显着相关。HPV表达在CR培养物中是保守的,包括CR-024,其携带新的HPV-69血清型。CR培养物用于使用MTT测定法测试顺铂反应。先前的工作还表明,这些模型可用于评估对辐射的反应,并可移植到小鼠模型中。全外显子组测序表明CR培养物保留了肿瘤突变负荷和驱动突变。
    结论:CR培养在增殖HNSCC细胞方面非常成功。这项研究包括来自代表性不足的少数群体的高比例患者。
    方法:不适用喉镜,2024.
    OBJECTIVE: To establish and characterize a diverse library of head and neck squamous cell cancer (HNSCC) cultures using conditional reprogramming (CR).
    METHODS: Patients enrolled on an IRB-approved protocol to generate tumor cell cultures using CR methods. Tumor and blood samples were collected and clinical information was recorded. Successful CR cultures were validated against banked reference tumors with short tandem repeat genotyping. Cell morphology was archived with photodocumentation. Clinical and demographic factors were evaluated for associations with successful establishment of CR culture. Human papilloma virus (HPV) genotyping, clonogenic survival, MTT assays, spheroid growth, and whole exome sequencing were carried out in selected cultures.
    RESULTS: Forty four patients were enrolled, with 31 (70%) successful CR cultures, 32% derived from patients who identified as Black and 61% as Hispanic. All major head and neck disease sites were represented, including 15 (48%) oral cavity and 8 (26%) p16-positive oropharynx cancers. Hispanic ethnicity and first primary tumors (vs. second primary or recurrent tumors) were significantly associated with successful CR culture. HPV expression was conserved in CR cultures, including CR-024, which carried a novel HPV-69 serotype. CR cultures were used to test cisplatin responses using MTT assays. Previous work has also demonstrated these models can be used to assess response to radiation and can be engrafted in mouse models. Whole exome sequencing demonstrated that CR cultures preserved tumor mutation burden and driver mutations.
    CONCLUSIONS: CR culture is highly successful in propagating HNSCC cells. This study included a high proportion of patients from underrepresented minority groups.
    METHODS: Not Applicable Laryngoscope, 134:2748-2756, 2024.
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  • 文章类型: Journal Article
    背景:使用单克隆抗体(mAb)的靶向免疫疗法是治疗恶性肿瘤的有效且安全的方法。具有改善的细胞毒性的单克隆抗体的开发,靶向新的和已知的肿瘤相关抗原,因此仍然是一个活跃的研究领域。我们报道了Dickkopf-1(DKK1)基于其在不同癌症中的广泛表达而不是在正常组织中的广泛表达,是人类癌症免疫治疗的良好靶标。由于DKK1是一种分泌蛋白,直接与DKK1结合的mAb在体内对癌细胞的作用有限。
    方法:使用间接ELISA测定DKK1-A2mAb的特异性和抗体结合能力,共焦成像,QIFIKIT抗体结合能力和细胞表面结合测定。使用表面等离子体共振生物传感器测定mAb的亲和力。进行基于流式细胞术的细胞死亡以检测肿瘤细胞凋亡。使用抗体依赖性细胞毒性(ADCC)和补体依赖性细胞毒性(CDC)测定来评估DKK1-A2mAb在体外介导ADCC和CDC针对肿瘤细胞的活性的能力。用FACSymphonyA3细胞分析仪收集流式细胞术数据,并用FlowJoV.10.1软件分析。使用人类癌症异种移植小鼠模型来确定DKK1-A2mAb的体内治疗功效和潜在安全性和毒性。进行原位TUNEL测定以检测肿瘤和小鼠器官中的凋亡。
    结果:我们产生了新的DKK1-A2mAb,其识别由HLA-A2+DKK1+癌细胞天然表达的人HLA-A*0201(HLA-A2)分子(DKK1-A2复合物)呈递的DKKK1P20肽。这些mAb通过激活caspase-9级联直接诱导HLA-A2+DKK1+血液和实体癌细胞的凋亡,通过介导CDC和ADCC在体外有效裂解癌细胞,并在其异种移植小鼠模型中治疗已建立的癌症。由于在大多数人体组织中检测不到DKK1,DKK1-A2mAb既不会在体外结合或杀死HLA-A2+血细胞,也不会在无肿瘤或荷瘤HLA-A2转基因小鼠中引起组织损伤。
    结论:我们的研究表明DKK1-A2mAb可能是治疗人类癌症的有希望的治疗剂。
    Targeted immunotherapy with monoclonal antibodies (mAbs) is an effective and safe method for the treatment of malignancies. Development of mAbs with improved cytotoxicity, targeting new and known tumor-associated antigens, therefore continues to be an active research area. We reported that Dickkopf-1 (DKK1) is a good target for immunotherapy of human cancers based on its wide expression in different cancers but not in normal tissues. As DKK1 is a secreted protein, mAbs binding directly to DKK1 have limited effects on cancer cells in vivo.
    The specificity and antibody-binding capacity of DKK1-A2 mAbs were determined using indirect ELISA, confocal imaging, QIFIKIT antibody-binding capacity and cell surface binding assays. The affinity of mAbs was determined using a surface plasmon resonance biosensor. A flow cytometry-based cell death was performed to detect tumor cell apoptosis. Antibody-dependent cellular cytotoxicity (ADCC) and complement-dependent cytotoxicity (CDC) assays were used to evaluate the ability of DKK1-A2 mAbs to mediate ADCC and CDC activities against tumor cells in vitro. Flow cytometry data were collected with an FACSymphony A3 cell analyzer and analyzed with FlowJo V.10.1 software. Human cancer xenograft mouse models were used to determine the in vivo therapeutic efficacy and the potential safety and toxicity of DKK1-A2 mAbs. In situ TUNEL assay was performed to detect apoptosis in tumors and mouse organs.
    We generated novel DKK1-A2 mAbs that recognize the DKK1 P20 peptide presented by human HLA-A*0201 (HLA-A2) molecules (DKK1-A2 complexes) that are naturally expressed by HLA-A2+DKK1+ cancer cells. These mAbs directly induced apoptosis in HLA-A2+DKK1+ hematologic and solid cancer cells by activating the caspase-9 cascade, effectively lysed the cancer cells in vitro by mediating CDC and ADCC and were therapeutic against established cancers in their xenograft mouse models. As DKK1 is not detected in most human tissues, DKK1-A2 mAbs neither bound to or killed HLA-A2+ blood cells in vitro nor caused tissue damage in tumor-free or tumor-bearing HLA-A2-transgenic mice.
    Our study suggests that DKK1-A2 mAbs may be a promising therapeutic agent to treat human cancers.
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  • 文章类型: Journal Article
    目标:开放科学是一种更透明地开展研究的运动和一系列实践。实施开放科学将大大改善公众获取并支持公平。它还具有通过数据和材料共享促进创新和减少重复的潜力。这里,我们调查了一组国际研究人员,他们在心血管杂志上发表了关于他们对开放科学的看法和实践的文章。
    方法:我们从SCImago期刊排名平台中确定了前100名“心脏病学和心血管医学”学科类别期刊。这是一个来自Scopus的公开门户。然后,我们从2021年3月1日至2022年3月1日在这些期刊上发表的所有文章中提取了相应作者的姓名和电子邮件。向参与者发送了有关开放科学的专门调查。调查主要包含多项选择和基于规模的问题,我们报告了计数数据和百分比。对于少数基于文本的回答,我们进行了主题内容分析。
    结果:198名参与者回答了我们的调查。参与者在9点量表上的平均反应为6.8(N=197,SD=1.8),一点也不熟悉(1)和非常熟悉(9),当表明他们对开放科学有多熟悉时。当被问及他们在哪里获得开放科学培训时,大多数参与者表示,这是在进行研究时自我发起的(n=103,52%),或者他们没有接受过开放科学方面的正式培训(n=72,36%)。超过一半的参与者表示,他们将受益于其机构在如何进行开放科学实践方面的实际支持(N=106,54%)。向参与者提出的每种开放科学实践的障碍都得到了承认。与会者指出,资金是采用开放科学的最重要动机。
    结论:很明显,单靠政策并不会导致开放科学的有效实施。这项调查作为心血管研究界开放科学表现和感知的基线,可用于为未来的干预和监测提供信息。
    OBJECTIVE: Open science is a movement and set of practices to conduct research more transparently. Implementing open science will significantly improve public access and supports equity. It also has the potential to foster innovation and reduce duplication through data and materials sharing. Here, we survey an international group of researchers publishing in cardiovascular journals regarding their perceptions and practices related to open science.
    METHODS: We identified the top 100 \'Cardiology and Cardiovascular Medicine\' subject category journals from the SCImago journal ranking platform. This is a publicly available portal that draws from Scopus. We then extracted the corresponding author\'s name and email from all articles published in these journals between 1 March 2021 and 1 March 2022. Participants were sent a purpose-built survey about open science. The survey contained primarily multiple choice and scale-based questions for which we report count data and percentages. For the few text-based responses we conducted thematic content analysis.
    RESULTS: 198 participants responded to our survey. Participants had a mean response of 6.8 (N=197, SD=1.8) on a 9-point scale with endpoints, not at all familiar (1) and extremely familiar (9), when indicating how familiar they were with open science. When asked about where they obtained open science training, most participants indicated this was done on the job self-initiated while conducting research (n=103, 52%), or that they had no formal training with respect to open science (n=72, 36%). More than half of the participants indicated they would benefit from practical support from their institution on how to perform open science practices (N=106, 54%). A diversity of barriers to each of the open science practices presented to participants were acknowledged. Participants indicated that funding was the most essential incentive to adopt open science.
    CONCLUSIONS: It is clear that policy alone will not lead to the effective implementation of open science. This survey serves as a baseline for the cardiovascular research community\'s open science performance and perception and can be used to inform future interventions and monitoring.
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  • 文章类型: Journal Article
    背景:用膀胱内卡介苗(BCG)治疗非肌层浸润性膀胱癌(NMIBC)的标准治疗与副作用有关,疾病复发/进展和供应短缺。我们最近在I期试验(NCT03421236)中显示,NMIBC患者的膀胱内滴注最大耐受剂量为Ty21a/Vivotif,口服伤寒疫苗,可能会有更好的安全性。在本报告中,我们评估了接受最大耐受剂量的临床试验患者膀胱内Ty21a的免疫原性,并将其与接受标准BCG的患者获得的数据进行了比较.
    方法:通过Luminex和流式细胞术测定接受Ty21a膀胱内滴注(n=13,NCT03421236中的A组和F组)或接受标准BCG治疗的NMIBC患者的尿细胞因子和免疫细胞。分别。在Ty21a患者中还测定了血清抗脂多糖伤寒抗体和循环Ty21a特异性T细胞应答。用混合效应分析对不同配对变量进行多重比较,其次是Sidak后期测试。用配对或未配对的Student'st检验进行单一比较。
    结果:与BCG相比,Ty21a诱导较低水平的炎性尿细胞因子,这与Ty21a患者中观察到的轻度不良事件(AE)相关。然而,Ty21a和BCG均诱导Th1肿瘤环境。在大多数Ty21a患者中观察到外周Ty21a特异性T细胞应答和/或抗体。指出膀胱是一个有效的局部免疫诱导位点。此外,还观察到Ty21a介导的非常规Vδ2T细胞的刺激,结果比BCG更有效。最后,很少的Ty21a滴注足以增加树突状细胞和T细胞的尿液浸润,以前与NMIBC原位小鼠模型的治疗效果相关。
    结论:Ty21a免疫治疗NMIBC患者具有较少炎症细胞因子和轻度AE的前景。而是诱导具有可能抗肿瘤潜力的免疫反应。未来的II期临床试验对于探索膀胱内Ty21a的可能功效是必要的。
    Standard of care treatment of non-muscle invasive bladder cancer (NMIBC) with intravesical Bacillus Calmette Guérin (BCG) is associated with side effects, disease recurrence/progression and supply shortages. We recently showed in a phase I trial (NCT03421236) that intravesical instillation in patients with NMIBC with the maximal tolerated dose of Ty21a/Vivotif, the oral vaccine against typhoid fever, might have a better safety profile. In the present report, we assessed the immunogenicity of intravesical Ty21a in patients of the clinical trial that had received the maximal tolerated dose and compared it with data obtained in patients that had received standard BCG.
    Urinary cytokines and immune cells of patients with NMIBC treated with intravesical instillations of Ty21a (n=13, groups A and F in NCT03421236) or with standard BCG in a concomitant observational study (n=12, UROV1) were determined by Luminex and flow cytometry, respectively. Serum anti-lipopolysaccharide Typhi antibodies and circulating Ty21a-specific T-cell responses were also determined in the Ty21a patients. Multiple comparisons of different paired variables were performed with a mixed-effect analysis, followed by Sidak post-test. Single comparisons were performed with a paired or an unpaired Student\'s t-test.
    As compared with BCG, Ty21a induced lower levels of inflammatory urinary cytokines, which correlated to the milder adverse events (AEs) observed in Ty21a patients. However, both Ty21a and BCG induced a Th1 tumor environment. Peripheral Ty21a-specific T-cell responses and/or antibodies were observed in most Ty21a patients, pointing the bladder as an efficient local immune inductive site. Besides, Ty21a-mediated stimulation of unconventional Vδ2 T cells was also observed, which turned out more efficient than BCG. Finally, few Ty21a instillations were sufficient for increasing urinary infiltration of dendritic cells and T cells, which were previously associated with therapeutic efficacy in the orthotopic mouse model of NMIBC.
    Ty21a immunotherapy of patient with NMIBC is promising with fewer inflammatory cytokines and mild AE, but induction of immune responses with possible antitumor potentials. Future phase II clinical trials are necessary to explore possible efficacy of intravesical Ty21a.
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  • 文章类型: Journal Article
    背景:尽管抗PD-1+LAG-3和抗PD-1+CTLA-4组合对晚期黑色素瘤有效,目前尚不清楚它们的作用机制是否重叠.
    方法:我们使用单细胞(sc)RNA-seq,流式细胞术和IHC分析响应SM1,D4M-UV2和B16黑色素瘤侧翼肿瘤和SM1脑转移,以探讨抗PD-1LAG-3和抗PD-1+CTLA-4组合的作用机制。CD4+和CD8+T细胞耗竭,四聚体结合测定和ELISPOT测定用于证明CD4+T细胞辅助在抗PD-1+LAG-3组合的抗肿瘤作用中的独特作用。
    结果:抗PD-1+CTLA-4组合与FOXP3+调节性CD4+细胞(Tregs)的浸润有关,较少的活化CD4+T细胞和IFNγ分泌细胞毒性CD8+T细胞亚群的积累,而抗PD-1+LAG-3组合导致表达CXCR4,TNFSF8,IL21R的CD4+T辅助细胞和细胞毒性标志物表达降低的CD8+T细胞亚群的积累.T细胞耗竭研究显示,抗PD-1+LAG-3组合需要CD4+T细胞,但不是在侧腹和脑肿瘤部位的PD-1-CTLA-4组合。在抗PD-1+LAG-3治疗的肿瘤中,CD4+T细胞耗竭与较少的活化(CD69+)CD8+T细胞和受损的IFNγ释放相关,但相反,在抗PD-1+CTLA-4治疗的肿瘤中,激活的CD8+T细胞和IFNγ释放的数量增加。
    结论:这些研究表明,这两种临床相关的免疫检查点抑制剂(ICI)组合对CD4+T细胞极化有不同的影响,反过来,影响细胞毒性CD8+T细胞功能。对这些临床相关的ICI组合的作用/抗性机制的进一步了解将允许治疗进一步个性化。
    Although the anti-PD-1+LAG-3 and the anti-PD-1+CTLA-4 combinations are effective in advanced melanoma, it remains unclear whether their mechanisms of action overlap.
    We used single cell (sc) RNA-seq, flow cytometry and IHC analysis of responding SM1, D4M-UV2 and B16 melanoma flank tumors and SM1 brain metastases to explore the mechanism of action of the anti-PD-1+LAG-3 and the anti-PD-1+CTLA-4 combination. CD4+ and CD8+ T cell depletion, tetramer binding assays and ELISPOT assays were used to demonstrate the unique role of CD4+T cell help in the antitumor effects of the anti-PD-1+LAG-3 combination.
    The anti-PD-1+CTLA-4 combination was associated with the infiltration of FOXP3+regulatory CD4+ cells (Tregs), fewer activated CD4+T cells and the accumulation of a subset of IFNγ secreting cytotoxic CD8+T cells, whereas the anti-PD-1+LAG-3 combination led to the accumulation of CD4+T helper cells that expressed CXCR4, TNFSF8, IL21R and a subset of CD8+T cells with reduced expression of cytotoxic markers. T cell depletion studies showed a requirement for CD4+T cells for the anti-PD-1+LAG-3 combination, but not the PD-1-CTLA-4 combination at both flank and brain tumor sites. In anti-PD-1+LAG-3 treated tumors, CD4+T cell depletion was associated with fewer activated (CD69+) CD8+T cells and impaired IFNγ release but, conversely, increased numbers of activated CD8+T cells and IFNγ release in anti-PD-1+CTLA-4 treated tumors.
    Together these studies suggest that these two clinically relevant immune checkpoint inhibitor (ICI) combinations have differential effects on CD4+T cell polarization, which in turn, impacted cytotoxic CD8+T cell function. Further insights into the mechanisms of action/resistance of these clinically-relevant ICI combinations will allow therapy to be further personalized.
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  • 文章类型: Journal Article
    背景:三级淋巴结构(TLS)是免疫细胞的有组织聚集体,在非淋巴组织中在出生后发育并与病理状况有关。TLS通常包含含有T细胞区和树突细胞并被T细胞区和树突细胞包围的B细胞滤泡。TLS作为抗肿瘤免疫的潜在介质在肿瘤微环境(TME)中的预后和预测价值已引起人们的兴趣。然而,TLS的定位和成熟与透明细胞肾细胞癌(ccRCC)中存在的临床结果之间的确切关系尚未阐明。
    方法:使用免疫组织化学和多光谱荧光来评估TLS异质性以及TME细胞浸润特征。对来自两个独立队列的395例ccRCC患者的TLS异质性的预后意义进行了彻底调查。通过定量免疫细胞浸润来评估TLS异质性与免疫活性之间的关联。
    结果:在34.2%的ccRCC样品中发现了浸润的TLS(N=395)。这些TLS被发现是肿瘤近端,肿瘤远端,或者两者都是37.8%,74.1%,和11.9%的TLS阳性病例,分别。在肿瘤远端TLS中发现早期TLS的比例更高(p=0.016),而肿瘤近端TLS主要包含次级滤泡样结构(p=0.004)。在主要研究队列中(复旦大学上海癌症中心,N=290),Kaplan-Meier分析显示,肿瘤近端TLS的存在与无进展生存期的改善之间存在显着相关性(PFS,p<0.001)和总生存期(OS,p=0.002)。相反,肿瘤远端TLS的存在与不良PFS(p=0.02)和OS(p=0.021)相关.这些发现在105例ccRCC患者的外部验证集中得到了进一步验证。值得注意的是,成熟TLS的存在(即次级卵泡样TLS,CD23+生发中心)与ccRCC患者更好的临床结局显着相关。此外,结合肿瘤近端TLS存在的新型列线图显示了ccRCC切除8年结局的显著可预测性(曲线下面积>0.80).此外,富含初级滤泡样TLS的肿瘤远端TLS的ccRCC样品在肿瘤远端区域表现出更高的程序性死亡配体1肿瘤相关巨噬细胞水平和调节性T细胞浸润,指示抑制TME。
    结论:本研究首次阐明了TLS定位和成熟异质性对ccRCC不同临床结局的影响。研究结果表明,ccRCC中的大多数TLS位于肿瘤远端区域,并与未成熟相关。免疫抑制特征。此外,我们的研究结果证实了先前的研究,表明肿瘤近端TLS与良好的临床结局相关.
    Tertiary lymphoid structures (TLS) are organized aggregates of immune cells that develop postnatally in non-lymphoid tissues and are associated with pathological conditions. TLS typically comprise B-cell follicles containing and are encompassed by T- cell zones and dendritic cells. The prognostic and predictive value of TLS in the tumor microenvironment (TME) as potential mediators of antitumor immunity have gained interest. However, the precise relationship between localization and maturation of TLS and the clinical outcome of their presence in clear cell renal cell carcinoma (ccRCC) is yet to be elucidated.
    Immunohistochemistry and multispectral fluorescence were used to evaluate the TLS heterogeneity along with TME cell-infiltrating characterizations. A thorough investigation of the prognostic implications of the TLS heterogeneity in 395 patients with ccRCC from two independent cohorts was conducted. Associations between TLS heterogeneity and immunologic activity were assessed by quantifying the immune cell infiltration.
    Infiltrated TLS were identified in 34.2% of the ccRCC samples (N=395). These TLS were found to be tumor-proximal, tumor-distal, or both in 37.8%, 74.1%, and 11.9% of the TLS-positive cases, respectively. A higher proportion of early TLS was found in tumor-distal TLS (p=0.016), while tumor-proximal TLS primarily comprised secondary follicle-like structures (p=0.004). In the main study cohort (Fudan University Shanghai Cancer Center, N=290), Kaplan-Meier analyses revealed a significant correlation between the presence of tumor-proximal TLS and improved progression-free survival (PFS, p<0.001) and overall survival (OS, p=0.002). Conversely, the presence of tumor-distal TLS was associated with poor PFS (p=0.02) and OS (p=0.021). These findings were further validated in an external validation set of 105 patients with ccRCC. Notably, the presence of mature TLS (namely secondary follicle-like TLS, with CD23+ germinal center) was significantly associated with better clinical outcomes in patients with ccRCC. Furthermore, novel nomograms incorporating the presence of tumor-proximal TLS demonstrated remarkable predictability for the 8-year outcomes of resected ccRCC (area under the curve >0.80). Additionally, ccRCC samples with tumor-distal TLS enriched with primary follicle-like TLS exhibited higher programmed death-ligand 1 tumor-associated macrophages levels and regulatory T cells infiltration in the tumor-distal region, indicative of a suppressive TME.
    This study for the first time elucidates the impact of TLS localization and maturation heterogeneities on the divergent clinical outcomes of ccRCC. The findings reveal that most TLS in ccRCC are located in the tumor-distal area and are associated with immature, immunosuppressive characterizations. Furthermore, our findings corroborate previous research demonstrating that tumor-proximal TLS were associated with favorable clinical outcomes.
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  • 文章类型: Journal Article
    目的:三尖瓣反流(TR)是一种常见的瓣膜疾病,具有显著的发病率和死亡率。我们旨在应用机器学习(ML)评估≥中度TR患者的风险分层。
    方法:回顾性纳入2005年1月至2016年12月超声心动图中TR≥中度的患者。我们使用70%的数据来训练基于ML的生存模型,包括27个临床和超声心动图特征,以在独立的测试集上预测3年期间的死亡率(30%)。为了说明基线合并症的差异,通过增加Charlson合并症指数(CCI)对各组进行分层预测.在这些组中分别使用表现最好的模型计算置换特征重要性。
    结果:在13312名患者中,平均年龄72±13岁,7406名(55%)女性,7409(56%)有中度,2646(20%)患有中重度和3257(24%)患有重度TR。3ML模型的1年死亡率总体表现良好,c-统计量0.74-0.75。有趣的是,CCI组之间的表现不同,(c统计量=最低CCI组0.774和最高CCI组0.661)。在3年的随访中,绩效下降(平均c指数0.78)。此外,有助于这些预测的前10个特征与CCI组略有不同,最重要的特征包括心率,右心室收缩压,血压,利尿剂的使用和年龄。
    结论:对常见临床和超声心动图特征的机器学习可以评估TR患者的死亡风险。在纳入临床实践之前,需要进一步完善模型并在前瞻性研究中进行验证。
    OBJECTIVE: Tricuspid regurgitation (TR) is a prevalent valve disease associated with significant morbidity and mortality. We aimed to apply machine learning (ML) to assess risk stratification in patients with ≥moderate TR.
    METHODS: Patients with ≥moderate TR on echocardiogram between January 2005 and December 2016 were retrospectively included. We used 70% of data to train ML-based survival models including 27 clinical and echocardiographic features to predict mortality over a 3-year period on an independent test set (30%). To account for differences in baseline comorbidities, prediction was performed in groups stratified by increasing Charlson Comorbidity Index (CCI). Permutation feature importance was calculated using the best-performing model separately in these groups.
    RESULTS: Of 13 312 patients, mean age 72 ± 13 years and 7406 (55%) women, 7409 (56%) had moderate, 2646 (20%) had moderate-severe and 3257 (24%) had severe TR. The overall performance for 1-year mortality by 3 ML models was good, c-statistic 0.74-0.75. Interestingly, performance varied between CCI groups, (c-statistic = 0.774 in lowest CCI group and 0.661 in highest CCI group). The performance decreased over 3-year follow-up (average c-index 0.78). Furthermore, the top 10 features contributing to these predictions varied slightly with the CCI group, the top features included heart rate, right ventricular systolic pressure, blood pressure, diuretic use and age.
    CONCLUSIONS: Machine learning of common clinical and echocardiographic features can evaluate mortality risk in patients with TR. Further refinement of models and validation in prospective studies are needed before incorporation into the clinical practice.
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