stem region

茎区
  • 文章类型: Journal Article
    α-1,6-岩藻糖基转移酶(FUT8)合成N-聚糖中的核心岩藻糖,在各种生理过程中起着关键作用。FUT8与许多其他糖基转移酶一样,是一种II型膜蛋白,其大的C端催化结构域与FUT8茎区相连,它包含两个α-螺旋。尽管几种糖基转移酶的茎区参与高尔基体定位的调节,FUT8茎区的功能尚未明确。这里,我们发现FUT8茎区是酶寡聚化必不可少的。我们表达了FUT8Δ茎突变体,其中茎区被甘氨酸/丝氨酸接头取代,在FUT8-KOHEK293细胞中。我们的免疫沉淀和天然PAGE分析表明,FUT8WT形成了多聚体,但FUT8Δ茎损害了细胞中的多聚体形成,尽管突变体保留了特定的活性。此外,突变蛋白的稳态水平较低,内质网定位增加,半衰期比FUT8WT短,表明茎区的丢失使FUT8蛋白不稳定。此外,对另一个缺乏部分茎区的突变体的免疫沉淀分析显示,FUT8茎区的第一个螺旋对于多聚体的形成至关重要。我们的发现表明,FUT8茎区对于多聚体形成是必不可少的,但对于催化活性不是必需的。提供有关FUT8蛋白如何在哺乳动物细胞中成熟和功能的见解。
    Alpha-1,6-fucosyltransferase (FUT8) synthesizes core fucose in N-glycans, which plays critical roles in various physiological processes. FUT8, as with many other glycosyltransferases, is a type-II membrane protein, and its large C-terminal catalytic domain is linked to the FUT8 stem region, which comprises two α-helices. Although the stem regions of several glycosyltransferases are involved in the regulation of Golgi localization, the functions of the FUT8 stem region have not been clarified as yet. Here, we found that the FUT8 stem region is essential for enzyme oligomerization. We expressed FUT8Δstem mutants, in which the stem region was replaced with glycine/serine linkers, in FUT8-KO HEK293 cells. Our immunoprecipitation and native-PAGE analysis showed that FUT8 WT formed a multimer but FUT8Δstem impaired multimer formation in the cells, although the mutants retained specific activity. In addition, the mutant protein had lower steady-state levels, increased endoplasmic reticulum localization, and a shorter half-life than FUT8 WT, suggesting that loss of the stem region destabilized the FUT8 protein. Furthermore, immunoprecipitation analysis of another mutant lacking a part of the stem region revealed that the first helix in the FUT8 stem region is critical for multimer formation. Our findings demonstrated that the FUT8 stem region is essential for multimer formation but not for catalytic activity, providing insights into how the FUT8 protein matures and functions in mammalian cells.
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  • 文章类型: Journal Article
    The major envelope protein E of flaviviruses contains an ectodomain that is connected to the transmembrane domain by the so-called \"stem\" region. In mature flavivirus particles, the stem is composed of two or three mostly amphipathic α-helices and a conserved sequence element (CS) with an undefined role in the viral life cycle. A tryptophan is the only residue within this region which is not only conserved in all vector-borne flaviviruses, but also in the group with no known vector. We investigated the importance of this residue in different stages of the viral life cycle by a mutagenesis-based approach using tick-borne encephalitis virus (TBEV). Replacing W421 by alanine or histidine strongly reduced the release of infectious virions and their thermostability, whereas fusion-related entry functions and virus maturation were still intact. Serial passaging of the mutants led to the emergence of a same-site compensatory mutation to leucine that largely restored these properties of the wildtype. The conserved tryptophan in CS (or another big hydrophobic amino acid at the same position) is thus essential for the assembly and infectivity of flaviviruses by being part of a network required for conferring stability to infectious particles.
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  • 文章类型: Journal Article
    Tembusu virus (TMUV) is a mosquito-borne flavivirus that most commonly affects adult breeder and layer ducks. However, a TMUV-caused neurological disease has also been found in ducklings below 7 weeks of age, highlighting the need to develop a safe vaccine for young ducklings. In this study, a plaque-purified PS TMUV strain was attenuated by serial passage in BHK-21 cells. Using 1-day-old Pekin ducklings as a model, the virus was confirmed to be attenuated sufficiently after 180 passages, whereas the neutralizing antibody response elicited by the 180th passage virus (PS180) was substantially impaired compared with PS. The findings suggest that sufficient attenuation results in loss of immunogenicity in the development of the live-attenuated TMUV vaccine. Comparative sequence analysis revealed that PS180 acquired one mutation (V41M) in prM and four mutations (T70A, Y176H, K313R, and F408L) in the envelope (E) protein. To identify the amino acid substitution(s) associated with loss of immunogenicity of PS180, we rescued parental viruses, rPS and rPS180, and produced mutant viruses, rPS180-M41V, rPS180-A70T, rPS180-H176Y, rPS180-R313K, rPS180-L408F, and rPS180-M5, which contained residue 41V in prM, residues 70T, 176Y, 313K, and 408F in E, and combination of the five residues, respectively, of PS in the backbone of the rPS180 genome. The neutralizing antibody response elicited by rPS180-L408F and rPS180-M5 was significantly higher than those by other mutant viruses and comparable to that by rPS. Furthermore, we produced mutant virus rPS-F408L, which contained residue 408L of PS180 in the backbone of the rPS genome. The F408L mutation conferred significantly decreased neutralizing antibody response to rPS-F408L, which was comparable to that elicited by rPS180. Based on homologous modeling, residue 408 was predicted to be located within the first helical domain of the stem region of the E protein (EH1). Together, these data demonstrate that a single mutation within the EH1 domain exerts a dramatical impact on the TMUV neutralizing antibody response. The present work may enhance our understanding of molecular basis of the TMUV neutralizing antibody response, and provides an important step for the development of a safe and efficient live-attenuated TMUV vaccine.
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  • 文章类型: Journal Article
    Petersplus综合征是一种罕见的隐性常染色体疾病,包括眼前节发育不全,身材矮小,手部异常和独特的面部特征。它仅与13q12.3区域中B3GALTL基因的突变有关。在这项研究中,我们使用离体方法对B3GALTL基因内的新型c.597-2A>G剪接突变进行了首次功能分析。结果表明,B3GALTLcDNA中外显子8完全跳跃,它改变了突变体转录本的开放阅读框,并在外显子9内产生了PTC。该发现潜在地引起无义mRNA被NMD降解(无义介导的mRNA衰变)。剪接位点突变的理论后果,用生物信息学工具HumanSpliceFinder预测,进行了与离体结果相关的调查和评估。研究结果证实了B3GALTL基因在典型的Peters-plus综合征中的关键作用,以及mRNA分析的实用性,以了解这种突变的主要影响和疾病的表型。
    Peters plus syndrome is a rare recessive autosomal disorder comprising ocular anterior segment dysgenesis, short stature, hand abnormalities and distinctive facial features. It was related only to mutations in the B3GALTL gene in the 13q12.3 region. In this study, we undertook the first functional analysis of a novel c.597-2 A>G splicing mutation within the B3GALTL gene using an ex-vivo approach. The results showed a complete skipping of exon 8 in the B3GALTL cDNA, which altered the open reading frame of the mutant transcript and generated a PTC within exon 9. This finding potentially elicits the nonsense mRNA to degradation by NMD (nonsense-mediated mRNA decay). The theoretical consequences of splice site mutations, predicted with the bioinformatics tool Human Splice Finder, were investigated and evaluated in relation to ex-vivo results. The findings confirmed the key role played by the B3GALTL gene in typical Peters-plus syndromes and the utility of mRNA analysis to understand the primary impacts of this mutation and the phenotype of the disease.
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