statistical methodology

统计方法
  • 文章类型: Journal Article
    这种个人观点适用于尚未成为统计学专家的早期职业研究人员。个人观点侧重于观察性研究中常见但通常可以避免的缺陷。我指出学习设计,数据收集,统计方法影响统计结果和研究结论。特别注意学习规划,样本选择,偏见,缺乏透明度和结果误解。
    This Personal View is intended for early-career researchers who are not yet experts in statistics. The Personal View focuses on common but usually avoidable flaws in the context of observational studies. I point out how study design, data collection, and statistical methods impact statistical results and research conclusions. With particular attention to study planning, sample selection, biases, lack of transparency and results misinterpretations.
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  • 文章类型: Editorial
    暂无摘要。
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  • 文章类型: Journal Article
    2020年,在COVID-19大流行的早期,英国精神病学杂志(BJPsych)建立了一系列名为BJPsych期刊俱乐部的免费在线教学课程。他们的教育目的是双重的:(a)为初级精神病医生提供一个友好但大规模的平台,以评估和批判性地评估BJPsych上发表的最新文章;(b)以开放和可访问的方式提出新的研究结果。在本文中,我们讨论我们的框架,我们遇到的挑战,原始模式是如何根据学员的反馈而演变的,提供国际在线期刊俱乐部时的成功提示。
    In 2020, during the early days of the COVID-19 pandemic, the British Journal of Psychiatry (BJPsych) established a series of free online teaching sessions called BJPsych Journal Clubs. Their educational purpose is two-fold: (a) to provide junior psychiatrists with a friendly but large-scale platform to evaluate and critically appraise recent articles published in the BJPsych and (b) to present new research findings in an open and accessible manner. In this paper, we discuss our framework, the challenges we encountered, how the original model is evolving based on feedback from trainees, and tips for success when delivering international online journal clubs.
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  • 文章类型: Journal Article
    在应用部门,数据建模/分析对于决策和未来预测非常重要。应用领域的数据分析主要依赖于概率分布。来自工程相关领域等众多领域的数据具有复杂的结构。对于这种具有复杂结构的数据,经典分布的实现不是一个合适的选择。因此,研究人员通常需要寻找更灵活的模型,这些模型可能具有捕获高度峰度的能力,并增加经典模型的拟合能力。从上述理论出发,为了实现这些目标,我们研究了一个新的概率模型,我们将其命名为新的beta幂柔性威布尔(NBPF-Weibull)分布。我们推导了NBPF-Weibull模型的一些主要分布性质。推导了NBPF-Weibull分布参数的估计器。通过结合针对不同选定参数值的模拟研究来判断这些估计器的性能。使用三个数据集来证明NBPF-Weibull模型的适用性。第一个数据集是从运动中观察到的。它代表了各种足球运动员的再受伤率。而其他两个数据集则是从可靠性区域观察到的。通过采用某些诊断标准,证明了NBPF-Weibull模型多次超越了著名的经典模型和修正模型。
    In applied sectors, data modeling/analysis is very important for decision-making and future predictions. Data analysis in applied sectors mainly relies on probability distributions. Data arising from numerous sectors such as engineering-related fields have complex structures. For such kinds of data having complex structures, the implementation of classical distributions is not a suitable choice. Therefore, researchers often need to look for more flexible models that might have the capability of capturing a high degree of kurtosis and increasing the fitting power of the classical models. Taking motivation from the above theory, to achieve these goals, we study a new probabilistic model, which we named a new beta power flexible Weibull (NBPF-Weibull) distribution. We derive some of the main distributional properties of the NBPF-Weibull model. The estimators for the parameters of the NBPF-Weibull distribution are derived. The performances of these estimators are judged by incorporating a simulation study for different selected values of the parameters. Three data sets are used to demonstrate the applicability of the NBPF-Weibull model. The first data set is observed from sports. It represents the re-injury rate of various football players. While the other two data sets are observed from the reliability zone. By adopting certain diagnostic criteria, it is proven that the NBPF-Weibull model repeatedly surpasses well-known classical and modified models.
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  • 文章类型: Journal Article
    背景:预计在COVID-19大流行期间,精神健康障碍将显著上升。然而,在上升到大流行前的水平之前,对精神卫生服务的转诊下降了几个月。
    目的:确定COVID-19大流行14个月期间普通人群中常见精神障碍的发病轨迹和危险因素,告知潜在的心理健康服务需求。
    方法:英国大学学院COVID-19社会研究的33703名成年人提供了2020年3月至2021年5月的数据。根据参与者在临床范围内报告抑郁症(患者健康问卷-9)或焦虑(广泛性焦虑症-7)症状的概率,使用生长混合模型来识别轨迹。每个月。探索了与每个轨迹类别相关的社会人口统计学和人格相关特征。
    结果:确定了抑郁和焦虑的五个轨迹类别。最大类别的参与者(62%)不太可能报告临床显着症状水平。其他轨迹代表参与者在整个过程中出现临床显着症状的可能性很高,早期临床上显著的症状随着时间的推移而减少,随着大流行的发展而出现的临床显着症状,并且整个过程中出现临床显着症状的可能性中等。雌性,年轻的成年人,看护者,那些有心理健康诊断的人,那些在大流行前经常社交的人和神经质得分较高的人更有可能经历抑郁或焦虑。
    结论:近40%的参与者遵循的轨迹表明有临床上显著的抑郁或焦虑症状的风险。确定的风险因素可以为公共卫生干预措施提供信息,以针对未来的突发卫生事件中的风险个体。
    BACKGROUND: A significant rise in mental health disorders was expected during the COVID-19 pandemic. However, referrals to mental health services dropped for several months before rising to pre-pandemic levels.
    OBJECTIVE: To identify trajectories of incidence and risk factors for common mental disorders among the general population during 14 months of the COVID-19 pandemic, to inform potential mental health service needs.
    METHODS: A cohort of 33 703 adults in England in the University College London COVID-19 Social Study provided data from March 2020 to May 2021. Growth mixture modelling was used to identify trajectories based on the probability of participants reporting symptoms of depression (Patient Health Questionnaire-9) or anxiety (Generalised Anxiety Disorder-7) in the clinical range, for each month. Sociodemographic and personality-related characteristics associated with each trajectory class were explored.
    RESULTS: Five trajectory classes were identified for depression and anxiety. Participants in the largest class (62%) were very unlikely to report clinically significant symptom levels. Other trajectories represented participants with a high likelihood of clinically significant symptoms throughout, early clinically significant symptoms that reduced over time, clinically significant symptoms that emerged as the pandemic unfolded and a moderate likelihood of clinically significant symptoms throughout. Females, younger adults, carers, those with existing mental health diagnoses, those that socialised frequently pre-pandemic and those with higher neuroticism scores were more likely to experience depression or anxiety.
    CONCLUSIONS: Nearly 40% of participants followed trajectories indicating risk of clinically significant symptoms of depression or anxiety. The identified risk factors could inform public health interventions to target individuals at risk in future health emergencies.
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  • 文章类型: Journal Article
    约翰·斯诺,1840年代和1850年代研究霍乱的伦敦医生,在Snow(1856)中指出,在1854年爆发期间,水对伦敦南部地区的死亡率产生了“压倒性的影响”。在一篇重新评估斯诺分析的论文中,Koch和Denike(2006)声称:“Snow不仅犯了轻微的算术错误,而且更重要的是严重的,概念上的错误对他的结果产生了不利影响。“错误和错误的说法是不正确的,并且是由于对Snow的数据和分析的误读或误解。Koch和Denike对Snow的原始数据进行了不适当的统计测试(并且错误地进行了测试)。更重要的是,由于对历史记录的误读,它们改变了底层的主源数据,使其结果无效。按照Snow的方法但使用现代统计工具对数据进行的分析强烈支持Snow关于水在解释霍乱死亡率变化方面的首要地位的主张。
    John Snow, the London doctor who studied cholera in the 1840s and 1850s, argued in Snow (1856) that water exerted an \"overwhelming influence\" on mortality in a region of south London during the 1854 outbreak. In a paper re-assessing Snow\'s analysis, Koch and Denike (2006) claim that \"Snow made not merely minor arithmetic errors but more importantly critical, conceptual mistakes that adversely affected his results.\" The claim of errors and mistakes is incorrect and due to a misreading or misunderstanding of Snow\'s data and analysis. Koch and Denike apply an inappropriate statistical test to Snow\'s original data (and do so incorrectly). More importantly, due to the misreading of the historical record they alter the underlying primary-source data, rendering their results invalid. Analysis of the data following Snow\'s approach but with modern statistical tools strongly supports Snow\'s claim for the primacy of water in accounting for variation in cholera mortality.
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  • 文章类型: Journal Article
    背景:2021年初,英国卫生和社会护理部呼吁研究同时施用COVID-19和流感疫苗的安全性和免疫原性。这些疫苗的共同施用将促进摄取并减少所需的医疗保健访问次数。ComFluCOV试验旨在及时提供必要的证据,以告知2021年秋季(9月至11月)的疫苗接种政策。本文介绍了用于帮助在6个月内成功提供试验结果的统计方法。
    方法:ComFluCOV是一项由布里斯托尔试验中心管理的平行组多中心随机对照试验。两名研究统计人员,在高级统计师的支持下,一起完成所有统计任务。开发了工具来帮助预筛选过程。每天制作临床数据和电子日记的自动数据监测报告,并由试验小组审查,并向站点提供反馈。平行独立进行分析,并比较所有结局的推导和结果.
    结果:在不到一个月的时间内完成了设置,在8周内招募了679名参与者。每天共有537份[至少]报告概述招聘,遵守协议,和数据质量,在16周的时间内,共制作了695份参与者电子日记报告,以确定任何遗漏的日记条目和不良事件.2021年5月向卫生和社会护理部报告了对验证数据的初步主要结果分析。在最终参与者随访6周后锁定数据库,并在3周后完成最终分析。在获得结果后14天内提交了一份印刷前出版物。结果是在首次讨论该试验6个月后报告的。
    结论:在ComFluCOV中实施的统计方法有助于在时间范围内完成研究。在时间紧迫的新临床领域工作具有挑战性。由两名统计学家共同研究提供了一个质量保证过程,使分析能够有效完成,并确保数据得到正确解释。开发的过程可以应用于其他研究,以最大限度地提高质量,降低错误的风险,和整体提供增强的验证方法。
    背景:ISRCTN14391248,于2021年3月30日注册。
    BACKGROUND: In early 2021, the Department of Health and Social Care in the UK called for research on the safety and immunogenicity of concomitant administration of COVID-19 and influenza vaccines. Co-administration of these vaccines would facilitate uptake and reduce the number of healthcare visits required. The ComFluCOV trial was designed to deliver the necessary evidence in time to inform the autumn (September-November) 2021 vaccination policy. This paper presents the statistical methodology applied to help successfully deliver the trial results in 6 months.
    METHODS: ComFluCOV was a parallel-group multicentre randomised controlled trial managed by the Bristol Trials Centre. Two study statisticians, supported by a senior statistician, worked together on all statistical tasks. Tools were developed to aid the pre-screening process. Automated data monitoring reports of clinic data and electronic diaries were produced daily and reviewed by the trial team and feedback provided to sites. Analyses were performed independently in parallel, and derivations and results of all outcomes were compared.
    RESULTS: Set-up was achieved in less than a month, and 679 participants were recruited over 8 weeks. A total of 537 [at least] daily reports outlining recruitment, protocol adherence, and data quality, and 695 daily reports of participant electronic diaries identifying any missed diary entries and adverse events were produced over a period of 16 weeks. A preliminary primary outcome analysis of validated data was reported to the Department of Health and Social Care in May 2021. The database was locked 6 weeks after the final participant follow-up and final analyses completed 3 weeks later. A pre-print publication was submitted within 14 days of the results being made available. The results were reported 6 months after first discussions about the trial.
    CONCLUSIONS: The statistical methodologies implemented in ComFluCOV helped to deliver the study in the timescale set. Working in a new clinical area to tight timescales was challenging. Having two statisticians working together on the study provided a quality assurance process that enabled analyses to be completed efficiently and ensured data were interpreted correctly. Processes developed could be applied to other studies to maximise quality, reduce the risk of errors, and overall provide enhanced validation methods.
    BACKGROUND: ISRCTN14391248, registered on 30 March 2021.
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  • 文章类型: Journal Article
    本技术报告是利用从2020年全国住院患者样本中提取的数据进行表型全关联研究(PheWAS)的综合指南。专门针对诊断为胰腺囊肿和肺癌的个体,该报告建立了一个循序渐进的工作流程,旨在帮助研究人员发现这一特定队列中的潜在关联.报告中概述的方法通过采用源自GitHub存储库并使用R执行的精选队列来进行可靠的数据分析,从而确保了清晰度和可重复性。代码包含关键步骤,包括利用QQ图作为旨在识别系统偏见或关联的关键诊断工具。此外,该报告包含了曼哈顿地块的创建,深入研究基本的数学考虑因素,以增强结果的可解释性。值得注意的是,该报告阐明了国际疾病分类第10版(ICD-10)代码的处理,为他们的细分提供了一个样本方法,以按诊断类别分析关联。分割与美国医学协会的ICD-10-CM2022中概述的指南一致,该指南是带有指南的完整官方代码手册(美国医学协会出版社,2021),确保标准化和严格的分析过程。这份全面的指南为研究人员提供了在胰腺囊肿和肺癌背景下导航PheWAS复杂性所需的工具和见解。促进透明度,再现性,有意义的科学探索。
    This technical report serves as a comprehensive guide for conducting a phenome-wide association study (PheWAS) utilizing data extracted from the Nationwide Inpatient Sample 2020. Specifically tailored to individuals diagnosed with pancreatic cysts and lung cancer, the report establishes a step-by-step workflow designed to assist researchers in uncovering potential associations within this specific cohort. The methodology outlined in the report ensures clarity and reproducibility by employing a curated cohort sourced from the GitHub repository and executed using R for robust data analysis. The code encompasses pivotal steps, including the utilization of a QQ plot as a crucial diagnostic tool aimed at identifying systematic biases or associations. Additionally, the report incorporates the creation of a Manhattan plot, delving into essential mathematical considerations to enhance the interpretability of the results. Notably, the report elucidates the handling of the International Classification of Disease version 10 (ICD-10) codes, providing a sample approach for their segmentation to analyze associations by diagnostic categories. The segmentation aligns with the guidelines outlined in the American Medical Association\'s ICD-10-CM 2022, the Complete Official Codebook with Guidelines (American Medical Association Press, 2021), ensuring a standardized and rigorous analytical process. This comprehensive guide equips researchers with the tools and insights needed to navigate the complexities of PheWAS within the context of pancreatic cysts and lung cancer, fostering transparency, reproducibility, and meaningful scientific exploration.
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  • 文章类型: Journal Article
    被诊断为注意力缺陷多动障碍(ADHD)的患者自杀风险较高。先前没有工作评估该人群中兴奋剂处方与自杀死亡之间的关联。这项回顾性队列研究包括退伍军人事务部诊断为活跃的ADHD患者,这些患者在2016年至2019年之间接受了兴奋剂药物治疗。我们发现,与不服用兴奋剂的月份相比,服用积极兴奋剂的月份与自杀死亡率风险降低相关(比值比0.57,95%CI0.36-0.88)。我们的结果表明,为诊断为ADHD的患者开具兴奋剂药物与降低自杀死亡率的风险有关。
    Patients diagnosed with attention-deficit hyperactivity disorder (ADHD) are at an elevated risk for suicide. No prior work has assessed the association between stimulant prescriptions and death by suicide in this population. This retrospective cohort study included Department of Veterans Affairs patients with an active ADHD diagnosis that received stimulant medications between 2016 and 2019. We found that months with active stimulant medication prescription was associated with decreased risk of suicide mortality compared with months without stimulant medication (odds ratio 0.57, 95% CI 0.36-0.88). Our results suggest that prescribing stimulant medications for patients diagnosed with ADHD is associated with decreased risk of suicide mortality.
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  • 文章类型: Journal Article
    调整潜在的混杂因素对于在结果研究中产生有价值的证据至关重要。尽管已经使用韩国国民健康保险索赔数据库发表了许多研究,没有一项研究严格审查了用于校正混杂因素的方法.本研究旨在回顾这些研究,并提出调整混杂因素的方法和应用。
    我们对电子数据库进行了文献检索,包括PubMed和Embase,从2021年1月1日至2022年12月31日。总的来说,检索了278项研究。合格标准发表在英语和结果研究中。由2名作者独立进行文献检索和文章筛选,最后,278项研究中有173项被纳入。
    39项研究在研究设计阶段使用匹配,和171使用回归分析或分析阶段的倾向评分对混杂因素进行了校正。其中,125人根据研究问题进行了回归分析。倾向得分匹配是涉及倾向得分的最常见方法。共有171项研究将年龄和/或性别作为混杂因素。合并症和医疗保健利用,包括药物和程序,在146和82项研究中被用作混杂因素,分别。
    这是针对最近发表的研究中用于调整混杂因素的方法和应用的第一篇评论。我们的结果表明,所有研究都通过适当的研究设计和统计方法对混杂因素进行了调整;然而,需要对混杂变量进行透彻的理解和仔细的应用,以避免错误的结果。
    OBJECTIVE: Adjusting for potential confounders is crucial for producing valuable evidence in outcome studies. Although numerous studies have been published using the Korea National Health Insurance Claim Database, no study has critically reviewed the methods used to adjust for confounders. This study aimed to review these studies and suggest methods and applications to adjust for confounders.
    METHODS: We conducted a literature search of electronic databases, including PubMed and Embase, from January 1, 2021 to December 31, 2022. In total, 278 studies were retrieved. Eligibility criteria were published in English and outcome studies. A literature search and article screening were independently performed by 2 authors and finally, 173 of 278 studies were included.
    RESULTS: Thirty-nine studies used matching at the study design stage, and 171 adjusted for confounders using regression analysis or propensity scores at the analysis stage. Of these, 125 conducted regression analyses based on the study questions. Propensity score matching was the most common method involving propensity scores. A total of 171 studies included age and/or sex as confounders. Comorbidities and healthcare utilization, including medications and procedures, were used as confounders in 146 and 82 studies, respectively.
    CONCLUSIONS: This is the first review to address the methods and applications used to adjust for confounders in recently published studies. Our results indicate that all studies adjusted for confounders with appropriate study designs and statistical methodologies; however, a thorough understanding and careful application of confounding variables are required to avoid erroneous results.
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