slowpoke

慢戳
  • 文章类型: Journal Article
    KCNMA1相关的信道病是一种以癫痫发作为特征的神经系统疾病,电机异常,和神经发育障碍。预测疾病机制是由KCNMA1编码的BKK通道活性的改变引起的;然而,仅对一部分患者相关变异进行了功能研究.尚未系统地评估这些变体在三级结构内的定位或通过致病性算法进行的评估。在这项研究中,在BK通道蛋白内定位了82种非同义患者相关的KCNMA1变体。位于cryo-EM分辨结构内的53个变体,包括21个在BK通道活动中被分类为功能获得(GOF)或功能丧失(LOF)。在孔中鉴定了LOF变体的簇,交流区域(RCK1),和附近的Ca2+碗(RCK2),与药理学或内源性调节位点重叠。然而,未发现GOF变异的聚类.为了进一步理解不确定意义(VUS)的变体,比较了多种标准致病性算法的评估结果,并从证实的GOF和LOF变异中建立了新的敏感性和特异性阈值.构建了集成算法(KCNMA1MetaScore),由这个训练的数据集的加权总和以及从Ca2+结合和未结合的BK通道导出的结构分量组成。KMS评估与10个VUS残基处性能最高的个体算法(REVEL)不同,通过电生理学在HEK293细胞中进一步研究了一个子集。M578T,E656A,和D965V(KMS+;REVEL-)被证实会改变电压钳记录中的BK通道特性,和D800Y(KMS-;REVEL+)在测试条件下被评估为良性的。然而,KMS未能准确评估K457E。这些综合结果揭示了BK通道功能域内潜在致病KCNMA1变体的分布和VUS的致病性评估,通过构建KMS等集成算法,提出在未来研究中改进信道级预测的策略。
    KCNMA1-linked channelopathy is a neurological disorder characterized by seizures, motor abnormalities, and neurodevelopmental disabilities. The disease mechanisms are predicted to result from alterations in KCNMA1-encoded BK K+ channel activity; however, only a subset of the patient-associated variants have been functionally studied. The localization of these variants within the tertiary structure or evaluation by pathogenicity algorithms has not been systematically assessed. In this study, 82 nonsynonymous patient-associated KCNMA1 variants were mapped within the BK channel protein. Fifty-three variants localized within cryoelectron microscopy-resolved structures, including 21 classified as either gain of function (GOF) or loss of function (LOF) in BK channel activity. Clusters of LOF variants were identified in the pore, the AC region (RCK1), and near the Ca2+ bowl (RCK2), overlapping with sites of pharmacological or endogenous modulation. However, no clustering was found for GOF variants. To further understand variants of uncertain significance (VUSs), assessments by multiple standard pathogenicity algorithms were compared, and new thresholds for sensitivity and specificity were established from confirmed GOF and LOF variants. An ensemble algorithm was constructed (KCNMA1 meta score (KMS)), consisting of a weighted summation of this trained dataset combined with a structural component derived from the Ca2+-bound and unbound BK channels. KMS assessment differed from the highest-performing individual algorithm (REVEL) at 10 VUS residues, and a subset were studied further by electrophysiology in HEK293 cells. M578T, E656A, and D965V (KMS+;REVEL-) were confirmed to alter BK channel properties in voltage-clamp recordings, and D800Y (KMS-;REVEL+) was assessed as benign under the test conditions. However, KMS failed to accurately assess K457E. These combined results reveal the distribution of potentially disease-causing KCNMA1 variants within BK channel functional domains and pathogenicity evaluation for VUSs, suggesting strategies for improving channel-level predictions in future studies by building on ensemble algorithms such as KMS.
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  • 文章类型: Journal Article
    BKK+通道是神经元和肌肉兴奋性的关键调节因子,由来自KCNMA1基因的成孔α亚基和细胞和组织选择性β亚基(KCNMB1-4)的四聚体组成。KCNMA1的突变与神经系统疾病有关,包括自闭症。然而,关于神经元BK通道β亚基在人类神经病理学中的作用知之甚少。β2亚基在中枢神经元中表达,并使BK通道失活,以及改变激活和去激活门控。在这项研究中,我们报道了G124R的功能效应,从1例自闭症谱系障碍患者的全外显子组测序中获得的一种新的KCNMB2突变.残基G124位于TM1和TM2之间的胞外环中,在物种之间是保守的,G124R错义突变是用计算工具预测的。为了研究致病性潜力,BK通道在HEK293T细胞中与β2WT和β2G124R亚基共表达。在激活和失活过程中(电压依赖性和动力学),在生理K条件(140/6mMK和10μMCa2)下,从内向外的贴片评估BK/β2电流。使用缺乏失活的β2亚基(β2IR)表明,与来自BK/β2IRWT通道的电流相比,来自BK/β2IRG124R通道的电流激活快2倍,失活慢2倍,激活的电压依赖性没有变化(V1/2)。尽管BK通道的打开和关闭发生了变化,BK/β2G124R失活率(τinact和τrecovery),和失活的V1/2,在标准稳态电压方案下,与BK/β2WT通道相比没有改变。动作电位诱发的电流也没有变化。因此,突变表型表明β2G124RTM1-TM2胞外环可以调节BK通道的激活和失活动力学。然而,需要更多的证据来验证KCNMB2中这种患者相关变异体的致病性.
    BK K+ channels are critical regulators of neuron and muscle excitability, comprised of a tetramer of pore-forming αsubunits from the KCNMA1 gene and cell- and tissue-selective β subunits (KCNMB1-4). Mutations in KCNMA1 are associated with neurological disorders, including autism. However, little is known about the role of neuronal BK channel β subunits in human neuropathology. The β2 subunit is expressed in central neurons and imparts inactivation to BK channels, as well as altering activation and deactivation gating. In this study, we report the functional effect of G124R, a novel KCNMB2 mutation obtained from whole-exome sequencing of a patient diagnosed with autism spectrum disorder. Residue G124, located in the extracellular loop between TM1 and TM2, is conserved across species, and the G124R missense mutation is predicted deleterious with computational tools. To investigate the pathogenicity potential, BK channels were co-expressed with β2WT and β2G124R subunits in HEK293T cells. BK/β2 currents were assessed from inside-out patches under physiological K+ conditions (140/6 mM K+ and 10 μM Ca2+) during activation and inactivation (voltage-dependence and kinetics). Using β2 subunits lacking inactivation (β2IR) revealed that currents from BK/β2IRG124R channels activated 2-fold faster and deactivated 2-fold slower compared with currents from BK/β2IRWT channels, with no change in the voltage-dependence of activation (V1/2). Despite the changes in the BK channel opening and closing, BK/β2G124R inactivation rates (τinact and τrecovery), and the V1/2 of inactivation, were unaltered compared with BK/β2WT channels under standard steady-state voltage protocols. Action potential-evoked current was also unchanged. Thus, the mutant phenotype suggests the β2G124R TM1-TM2 extracellular loop could regulate BK channel activation and deactivation kinetics. However, additional evidence is needed to validate pathogenicity for this patient-associated variant in KCNMB2.
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  • 文章类型: Journal Article
    在SLOWPOKE研究反应堆中,对假定的设计基础事故进行了大气扩散建模。MCNP-5计算机代码用于估计中子通量谱,然后将其用于ORIGEN-S代码中,以执行堆芯耗尽计算并确定放射源项。然后使用HotSpot健康物理代码对释放的放射性物质的大气传输进行建模,以估算对反应堆顺风方向人群的最终剂量。在主要气象条件下,反应堆排气烟囱释放的最高总有效剂量(TED),稳定性C类,是0.37mSv,而估计地面释放的最大TED为4.29mSv。地面沉积估计为3900kBq/m2。研究表明,此类事故导致的任何假设的放射性物质释放都不会对反应堆附近的市政水库产生重大不利影响。
    Atmospheric dispersion modeling was performed for a postulated design basis accident at a SLOWPOKE research reactor. The MCNP-5 computer code was used to estimate the neutron flux spectrum which was then used in the ORIGEN-S code to perform core depletion calculations and determine the radiological source term. The HotSpot health physics code was then used to model the atmospheric transport of the radioactive material released to estimate the resulting doses to the population downwind of the reactor. The highest total effective dose (TED) for a release from the reactor\'s exhaust stack in predominant meteorological conditions, stability class C, was 0.37 mSv, while a maximum TED of 4.29 mSv was estimated for a release at ground level. Ground deposition was estimated to be 3900 kBq/m2. It was shown that any hypothetical release of radioactive material resulting from such an accident would have no significant adverse effect on the municipal water reservoir close to the reactor.
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  • 文章类型: Journal Article
    KCNMA1相关的信道病是一种新兴的神经系统疾病,其特征是运动障碍的异质性和重叠组合,癫痫发作,发育迟缓,智力残疾。KCNMA1编码BK+通道,这有助于兴奋性和抑制性神经元和肌肉活动。了解疾病的基础是积极调查的重要领域;然而,罕见的患病率阻碍了建立基因型-表型相关性所需的大型患者队列的发展.在这次审查中,我们总结了目前69例患者的37个KCNMA1等位基因,并评估了关键的诊断和临床标志.目前,3个变体被分类为关于BK通道活动的功能增益,14功能丧失,15个不确定意义的变体,和假定的良性/VUS。与这些变异相关的症状从患者提供的信息和先前的出版物中进行策划,以定义临床表型的谱。在这个新扩展的队列中,癫痫发作在携带GOF和LOF变异的患者之间没有差异分布,而运动障碍按突变类型分开。阵发性非运动源性运动障碍主要在具有BK通道的GOF等位基因的患者中观察到,虽然不完全如此,而在LOF变异的患者中观察到其他运动障碍。神经发育和脑结构异常在LOF突变患者中普遍存在。与突变相反,疾病相关的KCNMA1单核苷酸多态性并不主要与神经系统表型相关,但涵盖了更广泛的外周生理功能.一起,这篇综述提供了探索KCNMA1相关信道病的遗传和生化基础的更多证据,并总结了多种KCNMA1基因变异类型的患者症状的临床储存库.
    KCNMA1-linked channelopathy is an emerging neurological disorder characterized by heterogeneous and overlapping combinations of movement disorder, seizure, developmental delay, and intellectual disability. KCNMA1 encodes the BK K+ channel, which contributes to both excitatory and inhibitory neuronal and muscle activity. Understanding the basis of the disorder is an important area of active investigation; however, the rare prevalence has hampered the development of large patient cohorts necessary to establish genotype-phenotype correlations. In this review, we summarize 37 KCNMA1 alleles from 69 patients currently defining the channelopathy and assess key diagnostic and clinical hallmarks. At present, 3 variants are classified as gain-of-function with respect to BK channel activity, 14 loss-of-function, 15 variants of uncertain significance, and putative benign/VUS. Symptoms associated with these variants were curated from patient-provided information and prior publications to define the spectrum of clinical phenotypes. In this newly expanded cohort, seizures showed no differential distribution between patients harboring GOF and LOF variants, while movement disorders segregated by mutation type. Paroxysmal non-kinesigenic dyskinesia was predominantly observed among patients with GOF alleles of the BK channel, although not exclusively so, while additional movement disorders were observed in patients with LOF variants. Neurodevelopmental and structural brain abnormalities were prevalent in patients with LOF mutations. In contrast to mutations, disease-associated KCNMA1 single nucleotide polymorphisms were not predominantly related to neurological phenotypes but covered a wider set of peripheral physiological functions. Together, this review provides additional evidence exploring the genetic and biochemical basis for KCNMA1-linked channelopathy and summarizes the clinical repository of patient symptoms across multiple types of KCNMA1 gene variants.
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  • 文章类型: Journal Article
    Paroxysmal dyskinesias (PxDs) are characterized by involuntary movements and altered pre-motor circuit activity. Causative mutations provide a means to understand the molecular basis of PxDs. Yet in many cases, animal models harboring corresponding mutations are lacking. Here we utilize the fruit fly, Drosophila, to study a PxD linked to a gain-of-function (GOF) mutation in the KCNMA1/hSlo1 BK potassium channel.
    We aimed to recreate the equivalent BK (big potassium) channel mutation in Drosophila. We sought to determine how this mutation altered action potentials (APs) and synaptic release in vivo; to test whether this mutation disrupted pre-motor circuit function and locomotion; and to define neural circuits involved in locomotor disruption.
    We generated a knock-in Drosophila model using homologous recombination. We used electrophysiological recordings and calcium-imaging to assess AP shape, neurotransmission, and the activity of the larval pre-motor central pattern generator (CPG). We used video-tracking and automated systems to measure movement, and developed a genetic method to limit BK channel expression to defined circuits.
    Neuronal APs exhibited reduced width and an enhanced afterhyperpolarization in the PxD model. We identified calcium-dependent reductions in neurotransmitter release, dysfunction of the CPG, and corresponding alterations in movement, in model larvae. Finally, we observed aberrant locomotion and dyskinesia-like movements in adult model flies, and partially mapped the impact of GOF BK channels on movement to cholinergic neurons.
    Our model supports a link between BK channel GOF and hyperkinetic movements, and provides a platform to dissect the mechanistic basis of PxDs. © 2021 The Authors. Movement Disorders published by Wiley Periodicals LLC on behalf of International Parkinson and Movement Disorder Society.
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  • 文章类型: Autobiography
    This is a brief reminiscence of my time in the Ganetzky lab from 1986-1990 and its effect on my scientific trajectory.
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  • 文章类型: Journal Article
    摘要系留果蝇可以研究飞行控制的生物力学和电生理学。我们在间接飞行肌肉(背侧纵向肌肉,DLMa)与通过麦克风信号对机翼拍频(WBF)的声学分析相结合。直接和间接飞行肌肉的同时电生理记录在技术上具有挑战性;然而,WBF被认为反映在与直飞肌肉子集的尖峰活动的一对一关系中,包括肌肉M1B。因此,我们的方法能够对神经支配直接和间接飞行肌肉子集的运动神经元电活动的时间特征的变化进行系统的突变分析。这里,我们报告了特定离子通道中断对肌源性DLMs(在〜5Hz激发)和相应的WBF(〜200Hz)的尖峰活动的影响。我们检查了以下基因的突变体:1)电压门控Ca(2)通道(杂音,cac),2)Ca(2+)激活K(+)通道(慢戳,slo),和3)电压门控K(+)通道(振动筛,Sh)及其辅助亚基(运动亢进,香港和颤抖,qvr)。我们发现,在cac和slo突变体中,响应吹气的飞行开始都受到了严重破坏。然而,一旦启动,slo飞行基本上没有改变,而cac显示DLM放电率和WBF中断。Sh,香港,qvr突变体能够保持正常的DLM发射速率,尽管增加了WBF。值得注意的是,Hk和qvr编码的辅助子单元中的缺陷可能会导致不同的后果,也就是说,中断的DLM发射节律,在Sh中没有观察到。我们对直接和间接飞行肌肉活动的突变分析表明,两种运动活动模式可能会被特定的离子通道突变独立地修饰,这种方法可以扩展到其他双翅目物种和额外的运动程序,如电惊厥刺激引起的癫痫发作。
    Abstract Tethered flies allow studies of biomechanics and electrophysiology of flight control. We performed microelectrode recordings of spikes in an indirect flight muscle (the dorsal longitudinal muscle, DLMa) coupled with acoustic analysis of wing beat frequency (WBF) via microphone signals. Simultaneous electrophysiological recording of direct and indirect flight muscles has been technically challenging; however, the WBF is thought to reflect in a one-to-one relationship with spiking activity in a subset of direct flight muscles, including muscle m1b. Therefore, our approach enables systematic mutational analysis for changes in temporal features of electrical activity of motor neurons innervating subsets of direct and indirect flight muscles. Here, we report the consequences of specific ion channel disruptions on the spiking activity of myogenic DLMs (firing at ∼5 Hz) and the corresponding WBF (∼200 Hz). We examined mutants of the genes enconding: 1) voltage-gated Ca(2+) channels (cacophony, cac), 2) Ca(2+)-activated K(+) channels (slowpoke, slo), and 3) voltage-gated K(+) channels (Shaker, Sh) and their auxiliary subunits (Hyperkinetic, Hk and quiver, qvr). We found flight initiation in response to an air puff was severely disrupted in both cac and slo mutants. However, once initiated, slo flight was largely unaltered, whereas cac displayed disrupted DLM firing rates and WBF. Sh, Hk, and qvr mutants were able to maintain normal DLM firing rates, despite increased WBF. Notably, defects in the auxiliary subunits encoded by Hk and qvr could lead to distinct consequences, that is, disrupted DLM firing rhythmicity, not observed in Sh. Our mutant analysis of direct and indirect flight muscle activities indicates that the two motor activity patterns may be independently modified by specific ion channel mutations, and that this approach can be extended to other dipteran species and additional motor programs, such as electroconvulsive stimulation-induced seizures.
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  • 文章类型: Journal Article
    Rhythmic motor behaviors are generated by networks of neurons. The sequence and timing of muscle contractions depends on both synaptic connections between neurons and the neurons\' intrinsic properties. In particular, motor neuron ion currents may contribute significantly to motor output. Large conductance Ca(2+)-dependent K(+) (BK) currents play a role in action potential repolarization, interspike interval, repetitive and burst firing, burst termination and interburst interval in neurons. Mutations in slowpoke (slo) genes encoding BK channels result in motor disturbances. This study examined the effects of manipulating slo channel expression on rhythmic motor activity using Drosophila larva as a model system. Dual intracellular recordings from adjacent body wall muscles were made during spontaneous crawling-related activity in larvae expressing a slo mutation or a slo RNA interference construct. The incidence and duration of rhythmic activity in slo mutants were similar to wild-type control animals, while the timing of the motor pattern was altered. slo mutants showed decreased burst durations, cycle durations, and quiescence intervals, and increased duty cycles, relative to wild-type. Expressing slo RNAi in identified motor neurons phenocopied many of the effects observed in the mutant, including decreases in quiescence interval and cycle duration. Overall, these results show that altering slo expression in the whole larva, and specifically in motor neurons, changes the frequency of crawling activity. These results suggest an important role for motor neuron intrinsic properties in shaping the timing of motor output.
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